RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 OR1L1Q8NH94 360 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 ATP6V0E2Q8NHE4 81 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 OR8B2Q96RD0 313 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 PBOV1Q9GZY1 135 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 TRPM6Q9BX84 2022 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 COL5A3P25940 1745 aaPredicted RBP3.45□□□□□ -1.86
UBR1-208ENST00000569066 RREB1Q92766 1687 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 IGKV2D-24A0A075B6R9 120 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 TRAV1-1A0A0B4J248 108 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 FAM240AA0A1B0GVK7 77 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 CEACAM18A8MTB9 384 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 LY6LH3BQJ8 138 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 J3QQQ9 107 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 CECR9P0C854 216 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 IHHQ14623 411 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 ELOCQ15369 112 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 CEACAM16Q2WEN9 425 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 AMTNQ6UX39 209 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 GOLT1AQ6ZVE7 132 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 FAM231DQ6ZW35 169 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 MDP1Q86V88 176 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 SCGB1C1Q8TD33 95 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 BORCS7Q96B45 105 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 SMIM7Q9BQ49 75 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 ARL2-SNX15V9GYD0 113 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 TRAV8-4A0A0B4J246 113 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 GGTLC3B5MD39 225 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 K7EQS6 105 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 WISP3O95389 354 aaPredicted RBP3.44□□□□□ -1.86
UBR1-208ENST00000569066 CPSF4O95639 269 aaKnown RBP3.44□□□□□ -1.86
UBR1-208ENST00000569066 P01737 135 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 PSMB3P49720 205 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 RPS11P62280 158 aaKnown RBP eCLIP3.44□□□□□ -1.86
UBR1-208ENST00000569066 ABCA11PQ4W5N1 156 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 C9orf153Q5TBE3 101 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 SGPP2Q8IWX5 399 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 TSKUQ8WUA8 353 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 C2orf50Q96LR7 162 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 FBXL15Q9H469 300 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 VSIRQ9H7M9 311 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 GNG13Q9P2W3 67 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 SCN10AQ9Y5Y9 1956 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 RICTORQ6R327 1708 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 TMED7-TICAM2A0A0A6YYA0 188 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 TMEM262E9PQX1 116 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 PSPHP1O15172 72 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 PIN1P1O15428 100 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 DEDDO75618 318 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 IGKV1D-16P01601 117 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 BCL2P10415 239 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 CSN1S1P47710 185 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 HES1Q14469 280 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 TEX36Q5VZQ5 186 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 BPIFA4PQ86YQ2 179 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 C10orf126Q8N4M7 172 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 LSM10Q969L4 123 aaKnown RBP3.44□□□□□ -1.86
UBR1-208ENST00000569066 PLA2G12AQ9BZM1 189 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 RABAC1Q9UI14 185 aa3.44□□□□□ -1.86
UBR1-208ENST00000569066 EXPH5Q8NEV8 1989 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 IGHV7-4-1A0A0J9YVY3 117 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 RBAKDNA6NC62 111 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 SNCGO76070 127 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 ASAH2BP0C7U1 165 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 COX8AP10176 69 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 FGF6P10767 208 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 FKBP2P26885 142 aaKnown RBP3.43□□□□□ -1.86
UBR1-208ENST00000569066 CCL23P55773 120 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 LINC00315P59091 139 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 UBE2G1P62253 170 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 RPL38P63173 70 aaKnown RBP3.43□□□□□ -1.86
UBR1-208ENST00000569066 PAPPAQ13219 1627 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 TMEM131Q92545 1883 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 RNF5Q99942 180 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 SBF2Q86WG5 1849 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 UBR2Q8IWV8 1755 aa3.43□□□□□ -1.86
UBR1-208ENST00000569066 DAPL1A0PJW8 107 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 M0R2P5 195 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 CRXO43186 299 aaPredicted RBP3.42□□□□□ -1.86
UBR1-208ENST00000569066 DHRS3O75911 302 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 ARL6IP5O75915 188 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 NAPSAO96009 420 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 ZNF688P0C7X2 276 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 CD28P10747 220 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 SSBP1Q04837 148 aaKnown RBP3.42□□□□□ -1.86
UBR1-208ENST00000569066 NOXRED1Q6NXP6 359 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 SSX8Q7RTT4 187 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 C3orf22Q8N5N4 141 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 LMX1AQ8TE12 382 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 ADAT3Q96EY9 351 aaPredicted RBP3.42□□□□□ -1.86
UBR1-208ENST00000569066 GOLGA4Q13439 2230 aaKnown RBP3.42□□□□□ -1.86
UBR1-208ENST00000569066 TJP1Q07157 1748 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 K7ERJ3 54 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 OVOL1O14753 267 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 SMIM13P0DJ93 91 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 IL9P15248 144 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 FOXA3P55318 350 aaPredicted RBP3.42□□□□□ -1.86
UBR1-208ENST00000569066 DSCR4P56555 118 aaPredicted RBP3.42□□□□□ -1.86
UBR1-208ENST00000569066 TAS2R45P59539 299 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 SUPT4H1P63272 117 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms