RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 FAM229AH3BQW9 127 aa10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 MPDU1O75352 247 aa10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 NDUFB6O95139 128 aa10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 SCGB1D2O95969 90 aa10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 IL7P13232 177 aa10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 PDE6HQ13956 83 aa10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 MORN5Q5VZ52 161 aa10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 LYPD5Q6UWN5 251 aa10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 NEGR1Q7Z3B1 354 aa10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 FAM19A4Q96LR4 140 aa10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 SDHCQ99643 169 aaPredicted RBP10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 CCDC32Q9BV29 185 aa10.72□□□□□ -0.69
HERPUD1-215ENST00000568676 CRISP2P16562 243 aa10.71□□□□□ -0.69
HERPUD1-215ENST00000568676 EVI2AP22794 236 aa10.71□□□□□ -0.69
HERPUD1-215ENST00000568676 GCSHP23434 173 aa10.71□□□□□ -0.69
HERPUD1-215ENST00000568676 CRYBA4P53673 196 aa10.71□□□□□ -0.69
HERPUD1-215ENST00000568676 KRTAP10-1P60331 282 aa10.71□□□□□ -0.69
HERPUD1-215ENST00000568676 MSRB1Q9NZV6 116 aa10.71□□□□□ -0.69
HERPUD1-215ENST00000568676 HHLA3Q9XRX5 114 aa10.71□□□□□ -0.69
HERPUD1-215ENST00000568676 RCL1Q9Y2P8 373 aaKnown RBP10.71□□□□□ -0.69
HERPUD1-215ENST00000568676 TRBV19A0A075B6N1 114 aa10.7□□□□□ -0.7
HERPUD1-215ENST00000568676 C7orf66A4D0T2 115 aa10.7□□□□□ -0.7
HERPUD1-215ENST00000568676 GPX1P07203 203 aa10.7□□□□□ -0.7
HERPUD1-215ENST00000568676 ARL16Q0P5N6 197 aa10.7□□□□□ -0.7
HERPUD1-215ENST00000568676 NRARPQ7Z6K4 114 aa10.7□□□□□ -0.7
HERPUD1-215ENST00000568676 TMEM14CQ9P0S9 112 aa10.7□□□□□ -0.7
HERPUD1-215ENST00000568676 KLF12Q9Y4X4 402 aa10.7□□□□□ -0.7
HERPUD1-215ENST00000568676 L7N2F9 121 aa10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 RGS13O14921 159 aa10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 DNAH10OSP0CZ25 163 aa10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 HIST1H1EP10412 219 aaKnown RBP10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 VAMP2P63027 116 aa10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 C9orf47Q6ZRZ4 202 aa10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 C10orf126Q8N4M7 172 aa10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 ARPC5LQ9BPX5 153 aa10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 TMEM70Q9BUB7 260 aa10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 MRPL32Q9BYC8 188 aaKnown RBP10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 C20orf85Q9H1P6 137 aa10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 GSKIPQ9P0R6 139 aa10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 TNFRSF18Q9Y5U5 241 aa10.69□□□□□ -0.7
HERPUD1-215ENST00000568676 TRAV5A0A0B4J249 113 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 M0R3E3 92 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 MBPP02686 304 aaPredicted RBP10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 SRIP30626 198 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 RNASE4P34096 147 aaKnown RBP10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 FUSP35637 526 aaKnown RBP eCLIP10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 RPL29P47914 159 aaKnown RBP10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 CD300CQ08708 224 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 BTN1A1Q13410 526 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 FHL2Q14192 279 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 ZNF846Q147U1 533 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 TMEM78Q5T7P6 136 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 Q6ZSN1 163 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 IQCF2Q8IXL9 164 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 MITD1Q8WV92 249 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 AGPAT4-IT1Q9H0P7 198 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 AAMDCQ9H7C9 122 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 UQCC1Q9NVA1 299 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 WDR83OSQ9Y284 106 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 TIMM9Q9Y5J7 89 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 FAT1Q14517 4588 aa10.68□□□□□ -0.7
HERPUD1-215ENST00000568676 IGHV1OR15-1A0A075B7D0 117 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 TRBV7-9A0A0J9YWB2 115 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 LYRM1O43325 122 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 PRAF2O60831 178 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 IGHV3-53P01767 116 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 ORM1P02763 201 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 ZNF415Q09FC8 603 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 ERCC8Q13216 396 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 MIC13Q5XKP0 118 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 NTN5Q8WTR8 489 aaPredicted RBP10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 CHAC2Q8WUX2 184 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 PCNPQ8WW12 178 aaKnown RBP10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 SLC39A9Q9NUM3 307 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 BOLA1Q9Y3E2 137 aa10.67□□□□□ -0.7
HERPUD1-215ENST00000568676 TRGV4A0A0C4DH28 118 aa10.66□□□□□ -0.7
HERPUD1-215ENST00000568676 VWC2Q2TAL6 325 aa10.66□□□□□ -0.7
HERPUD1-215ENST00000568676 C8orf49Q96NF6 230 aa10.66□□□□□ -0.7
HERPUD1-215ENST00000568676 TXNDC17Q9BRA2 123 aa10.66□□□□□ -0.7
HERPUD1-215ENST00000568676 MRPL16Q9NX20 251 aaKnown RBP10.66□□□□□ -0.7
HERPUD1-215ENST00000568676 FLVCR2Q9UPI3 526 aa10.66□□□□□ -0.7
HERPUD1-215ENST00000568676 K7EQD1 137 aa10.65□□□□□ -0.7
HERPUD1-215ENST00000568676 NDUFB4O95168 129 aa10.65□□□□□ -0.7
HERPUD1-215ENST00000568676 S100A11P31949 105 aa10.65□□□□□ -0.7
HERPUD1-215ENST00000568676 BCAP31P51572 246 aa10.65□□□□□ -0.7
HERPUD1-215ENST00000568676 CAV2P51636 162 aa10.65□□□□□ -0.7
HERPUD1-215ENST00000568676 MZT2BQ6NZ67 158 aa10.65□□□□□ -0.7
HERPUD1-215ENST00000568676 ZFAND2AQ8N6M9 145 aa10.65□□□□□ -0.7
HERPUD1-215ENST00000568676 MYCBP2O75592 4640 aa10.65□□□□□ -0.71
HERPUD1-215ENST00000568676 PLA2G10O15496 165 aa10.64□□□□□ -0.71
HERPUD1-215ENST00000568676 SMR3BP02814 79 aaPredicted RBP10.64□□□□□ -0.71
HERPUD1-215ENST00000568676 PVALBP20472 110 aaPredicted RBP10.64□□□□□ -0.71
HERPUD1-215ENST00000568676 BTCP35070 178 aa10.64□□□□□ -0.71
HERPUD1-215ENST00000568676 SH2D6Q7Z4S9 175 aa10.64□□□□□ -0.71
HERPUD1-215ENST00000568676 OR10G4Q8NGN3 311 aa10.64□□□□□ -0.71
HERPUD1-215ENST00000568676 ZNF492Q9P255 531 aa10.64□□□□□ -0.71
HERPUD1-215ENST00000568676 TP53TG3Q9ULZ0 132 aa10.64□□□□□ -0.71
HERPUD1-215ENST00000568676 VPS13BQ7Z7G8 4022 aa10.63□□□□□ -0.71
HERPUD1-215ENST00000568676 IGLV5-52A0A0A0MRZ9 124 aa10.63□□□□□ -0.71
HERPUD1-215ENST00000568676 C9JCJ5 164 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms