RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 SERTM2A0A1B0GWG4 89 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 RBAKDNA6NC62 111 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 A8MTW9 85 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 A8MZ25 164 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 K7EIL1 84 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 DUSP14O95147 198 aaKnown RBP6.23□□□□□ -1.41
SF3B3-212ENST00000568539 CNN1P51911 297 aaKnown RBP6.23□□□□□ -1.41
SF3B3-212ENST00000568539 HIST1H1AQ02539 215 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-212ENST00000568539 ERCC8Q13216 396 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 TOR2AQ5JU69 321 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 ZNF506Q5JVG8 444 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 GOLT1AQ6ZVE7 132 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 TRPT1Q86TN4 253 aaKnown RBP6.23□□□□□ -1.41
SF3B3-212ENST00000568539 OR10J6PQ8NGY7 276 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 HIST1H2BAQ96A08 127 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 ATG101Q9BSB4 218 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 SRD5A3Q9H8P0 318 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 RPH3ALQ9UNE2 315 aa6.23□□□□□ -1.41
SF3B3-212ENST00000568539 SCO2A0A1W2PP80 73 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 RBMY1BA6NDE4 496 aaKnown RBP6.22□□□□□ -1.41
SF3B3-212ENST00000568539 RBMY1EA6NEQ0 496 aaKnown RBP6.22□□□□□ -1.41
SF3B3-212ENST00000568539 PEX7O00628 323 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 PDE6DO43924 150 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 RBMY1DP0C7P1 496 aaKnown RBP6.22□□□□□ -1.41
SF3B3-212ENST00000568539 AMTNQ6UX39 209 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 LINC00322Q6ZN03 302 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-212ENST00000568539 C9orf47Q6ZRZ4 202 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 STHQ8IWL8 128 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 CYB561D1Q8N8Q1 229 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 OR4B1Q8NGF8 309 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 C11orf52Q96A22 123 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 LINC00479Q96M42 142 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 VGLL1Q99990 258 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 EIF5A2Q9GZV4 153 aaKnown RBP6.22□□□□□ -1.41
SF3B3-212ENST00000568539 AGPAT4-IT1Q9H0P7 198 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 CDIP1Q9H305 208 aa6.22□□□□□ -1.41
SF3B3-212ENST00000568539 TRAV8-1A0A0A6YYK1 113 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 F6UZH7 168 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 K7EQM0 130 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 NDUFS6O75380 124 aaKnown RBP6.21□□□□□ -1.42
SF3B3-212ENST00000568539 IGKV3-20P01619 116 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 IGLV2-11P01706 119 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 CT45A10P0DMU9 189 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 RPL35AP18077 110 aaKnown RBP6.21□□□□□ -1.42
SF3B3-212ENST00000568539 ZNF138P52744 262 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 SRSF3P84103 164 aaKnown RBP6.21□□□□□ -1.42
SF3B3-212ENST00000568539 TMEM78Q5T7P6 136 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 TMEM75Q8N9X5 138 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 Q8TAT8 98 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 C2CD4CQ8TF44 421 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 FAM19A4Q96LR4 140 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 LINC00477Q96M19 166 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 ODF3Q96PU9 254 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 TUBA4BQ9H853 241 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 MED9Q9NWA0 146 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 ZNF492Q9P255 531 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 KLF12Q9Y4X4 402 aa6.21□□□□□ -1.42
SF3B3-212ENST00000568539 LOC102724200A0A096LPH7 203 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-212ENST00000568539 TRAV34A0A0B4J273 112 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 RAB19A4D1S5 217 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 FBLL1A6NHQ2 334 aaKnown RBP6.2□□□□□ -1.42
SF3B3-212ENST00000568539 C9JQL5 133 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 TMEM250H0YL14 139 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 FRMD6-AS1P0C7T7 363 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 AKR1C3P42330 323 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 FLI1Q01543 452 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-212ENST00000568539 MORN3Q6PF18 240 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-212ENST00000568539 FMC1Q96HJ9 113 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 SGK494Q96LW2 274 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 SLC35B3Q9H1N7 401 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 SMDT1Q9H4I9 107 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 PPP1R14DQ9NXH3 145 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 PSG8Q9UQ74 426 aa6.2□□□□□ -1.42
SF3B3-212ENST00000568539 KIR2DL5BA0A0G2JN68 375 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 KIR2DL5BA0A0G2JPC4 375 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 TRBV7-9A0A0J9YWB2 115 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 TRBV6-1A0A0K0K1D8 114 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 LINC00862A6NCI5 91 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 S100A9P06702 114 aaKnown RBP6.19□□□□□ -1.42
SF3B3-212ENST00000568539 SRP19P09132 144 aaKnown RBP6.19□□□□□ -1.42
SF3B3-212ENST00000568539 GIG44P09565 113 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-212ENST00000568539 CRISP2P16562 243 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 NUTF2P61970 127 aaKnown RBP6.19□□□□□ -1.42
SF3B3-212ENST00000568539 UBE2G1P62253 170 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 PEA15Q15121 130 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 TMEM183BQ1AE95 376 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 SPINK13Q1W4C9 94 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 Q86TA4 180 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 KIR2DL5AQ8N109 375 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 KIR2DL5BQ8NHK3 375 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 TVP23CQ96ET8 276 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 ASCL2Q99929 193 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 DERL1Q9BUN8 251 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 CSTL1Q9H114 145 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 LENEPQ9Y5L5 61 aa6.19□□□□□ -1.42
SF3B3-212ENST00000568539 KLLNB2CW77 178 aa6.18□□□□□ -1.42
SF3B3-212ENST00000568539 M0R2Z0 102 aa6.18□□□□□ -1.42
SF3B3-212ENST00000568539 CRXO43186 299 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-212ENST00000568539 LTAP01374 205 aa6.18□□□□□ -1.42
SF3B3-212ENST00000568539 AMBPP02760 352 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms