RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 LYRM9A8MSI8 78 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 ZNF705GA8MUZ8 300 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 FNDC10F2Z333 226 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 ADAP1O75689 374 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 NDUFB6O95139 128 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 OR4E1P0C645 316 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 METTL15P1P0C7V9 234 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 LINC00869P0C866 280 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 DEFB130BP0DP73 79 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 DEFB130AP0DP74 79 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 HTN1P15515 57 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 PVALBP20472 110 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 TSPOP30536 169 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 TAS2R30P59541 319 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 DEFB1P60022 68 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 RRAS2P62070 204 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 HIST1H1AQ02539 215 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 SPINK13Q1W4C9 94 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 RGS21Q2M5E4 152 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 IAH1Q2TAA2 248 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 LGALS9BQ3B8N2 356 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 RNF212Q495C1 297 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 Q6ZNX1 250 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 Q6ZRG5 221 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 BPIFA4PQ86YQ2 179 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 C1orf158Q8N1D5 194 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 OR11H7Q8NGC8 314 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 OR10J6PQ8NGY7 276 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 C20orf173Q96LM9 149 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 UHRF2Q96PU4 802 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 SHANK2-AS3Q9BTD1 123 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 GGACTQ9BVM4 153 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 ARL6Q9H0F7 186 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 V9GYH0 126 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 KMT2AQ03164 3969 aa3.32□□□□□ -1.88
HERPUD1-213ENST00000568358 IGLV2-18A0A075B6J9 118 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 E5RGE8 158 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 F5H768 121 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 H3BRN7 92 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 M0R2Z0 102 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 COX7A2P2O60397 106 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 NUDT3O95989 172 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 ATP5G1P05496 136 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 CXCL2P19875 107 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 ATP5G3P48201 142 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 CCL18P55774 89 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 TAS2R60P59551 318 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 CLINT1Q14677 625 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 C1orf134Q5TEV5 83 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 C10orf113Q5VZT2 155 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 IGFL4Q6B9Z1 124 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 LCN15Q6UWW0 184 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 ZNF493Q6ZR52 646 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 LINC00305Q7Z4B0 112 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 ZNF546Q86UE3 836 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 C12orf45Q8N5I9 185 aaPredicted RBP3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 RNF182Q8N6D2 247 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 OR8A1Q8NGG7 326 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 RPUSD4Q96CM3 377 aaKnown RBP3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 C16orf74Q96GX8 76 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 SLC50A1Q9BRV3 221 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 SCRT1Q9BWW7 348 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 KRTAP17-1Q9BYP8 105 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 SRRQ9GZT4 340 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 C20orf85Q9H1P6 137 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 ARV1Q9H2C2 271 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 FLVCR2Q9UPI3 526 aa3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 TIMM8BQ9Y5J9 83 aaPredicted RBP3.31□□□□□ -1.88
HERPUD1-213ENST00000568358 PLECQ15149 4684 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 TRAV12-2A0A075B6T6 113 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 TRAV8-2A0A0B4J237 113 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 PMS2P5A8MQ11 134 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 A8MTW9 85 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 SNURFLB1AK76 121 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 H7BYZ3 331 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 AGPAT2O15120 278 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 CXCL3P19876 107 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 S100A11P31949 105 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 CAV2P51636 162 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 HBG1P69891 147 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 HBG2P69892 147 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 SLC38A11Q08AI6 406 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 SRSF9Q13242 221 aaKnown RBP eCLIP3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 OPCMLQ14982 345 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 GUK1Q16774 197 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 PAPPA-AS1Q5QFB9 102 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 KCNIP4Q6PIL6 250 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 AMTNQ6UX39 209 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 TMEM14EPQ6UXP3 125 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 BAP18Q8IXM2 172 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 PRR26Q8N8Z3 221 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 PFDN5Q99471 154 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 C20orf144Q9BQM9 153 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 RCL1Q9Y2P8 373 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 LSM5Q9Y4Y9 91 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 PXMP4Q9Y6I8 212 aa3.3□□□□□ -1.88
HERPUD1-213ENST00000568358 C7orf66A4D0T2 115 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 K7EPK0 472 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms