RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 PRAC2D3DTV9 90 aa9.29□□□□□ -0.92
TSC2-220ENST00000568238 M0R3E3 92 aa9.29□□□□□ -0.92
TSC2-220ENST00000568238 ICAM4Q14773 271 aa9.29□□□□□ -0.92
TSC2-220ENST00000568238 AAMDCQ9H7C9 122 aa9.29□□□□□ -0.92
TSC2-220ENST00000568238 DNAH2Q9P225 4427 aa9.29□□□□□ -0.92
TSC2-220ENST00000568238 TRAV10A0A0B4J240 114 aa9.28□□□□□ -0.92
TSC2-220ENST00000568238 A0A1B0GV50 99 aa9.28□□□□□ -0.92
TSC2-220ENST00000568238 CNN1P51911 297 aaKnown RBP9.28□□□□□ -0.92
TSC2-220ENST00000568238 FAM74A1Q5RGS3 127 aa9.28□□□□□ -0.92
TSC2-220ENST00000568238 OR8A1Q8NGG7 326 aa9.28□□□□□ -0.92
TSC2-220ENST00000568238 Q9H3A6 140 aa9.28□□□□□ -0.92
TSC2-220ENST00000568238 TMEM167BQ9NRX6 74 aa9.28□□□□□ -0.92
TSC2-220ENST00000568238 CELA1Q9UNI1 258 aa9.28□□□□□ -0.92
TSC2-220ENST00000568238 DUSP14O95147 198 aaKnown RBP9.27□□□□□ -0.93
TSC2-220ENST00000568238 FXYD7P58549 80 aa9.27□□□□□ -0.93
TSC2-220ENST00000568238 DPPA3Q6W0C5 159 aa9.27□□□□□ -0.93
TSC2-220ENST00000568238 ZNF705AQ6ZN79 300 aaPredicted RBP9.27□□□□□ -0.93
TSC2-220ENST00000568238 OR10J6PQ8NGY7 276 aa9.27□□□□□ -0.93
TSC2-220ENST00000568238 SFT2D1Q8WV19 159 aa9.27□□□□□ -0.93
TSC2-220ENST00000568238 MRPL53Q96EL3 112 aaKnown RBP9.27□□□□□ -0.93
TSC2-220ENST00000568238 TMPRSS5Q9H3S3 457 aa9.27□□□□□ -0.93
TSC2-220ENST00000568238 APLNQ9ULZ1 77 aa9.27□□□□□ -0.93
TSC2-220ENST00000568238 PRELID1Q9Y255 219 aa9.27□□□□□ -0.93
TSC2-220ENST00000568238 FAT2Q9NYQ8 4349 aa9.27□□□□□ -0.93
TSC2-220ENST00000568238 ALKAL2Q6UX46 152 aa9.26□□□□□ -0.93
TSC2-220ENST00000568238 LYPD1Q8N2G4 141 aa9.26□□□□□ -0.93
TSC2-220ENST00000568238 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
TSC2-220ENST00000568238 SLC35B3Q9H1N7 401 aa9.26□□□□□ -0.93
TSC2-220ENST00000568238 OTORQ9NRC9 128 aa9.26□□□□□ -0.93
TSC2-220ENST00000568238 RPH3ALQ9UNE2 315 aa9.26□□□□□ -0.93
TSC2-220ENST00000568238 IGHV4-4A0A075B6R2 117 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 IGKV2-40A0A087WW87 121 aaPredicted RBP9.25□□□□□ -0.93
TSC2-220ENST00000568238 PGPA6NDG6 321 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 IGKV2D-40P01614 121 aaPredicted RBP9.25□□□□□ -0.93
TSC2-220ENST00000568238 H2AFB1P0C5Y9 115 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 SULT1A2P50226 295 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 RAB5CP51148 216 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 UBE2G2P60604 165 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 ERCC8Q13216 396 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 C12orf74Q32Q52 190 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 ZNF767PQ75MW2 155 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 SUN5Q8TC36 379 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 NEU1Q99519 415 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 PPP1R14DQ9NXH3 145 aa9.25□□□□□ -0.93
TSC2-220ENST00000568238 DNAH17Q9UFH2 4485 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 PKHD1P08F94 4074 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 IGHV3OR16-12A0A075B7B8 117 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 DEFB131BA0A096LNP1 70 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 TMEM189A5PLL7 270 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 SMIM9A6NGZ8 99 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 GGTLC3B5MD39 225 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 M0R2Z0 102 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 AMBPP02760 352 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 CSN1S1P47710 185 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 AMTNQ6UX39 209 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 CMTM2Q8TAZ6 248 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 MBD3L1Q8WWY6 194 aa9.24□□□□□ -0.93
TSC2-220ENST00000568238 YTHDF2Q9Y5A9 579 aaKnown RBP9.24□□□□□ -0.93
TSC2-220ENST00000568238 A8MTW9 85 aa9.23□□□□□ -0.93
TSC2-220ENST00000568238 NPIPB6E9PJ23 425 aa9.23□□□□□ -0.93
TSC2-220ENST00000568238 SLC25A5P05141 298 aaKnown RBP9.23□□□□□ -0.93
TSC2-220ENST00000568238 EMP1P54849 157 aa9.23□□□□□ -0.93
TSC2-220ENST00000568238 GNG5P63218 68 aa9.23□□□□□ -0.93
TSC2-220ENST00000568238 SPINK13Q1W4C9 94 aa9.23□□□□□ -0.93
TSC2-220ENST00000568238 GOLT1BQ9Y3E0 138 aa9.23□□□□□ -0.93
TSC2-220ENST00000568238 DIRC3C9JPN6 131 aa9.22□□□□□ -0.93
TSC2-220ENST00000568238 SPART-AS1P0CW21 52 aa9.22□□□□□ -0.93
TSC2-220ENST00000568238 CT45A10P0DMU9 189 aa9.22□□□□□ -0.93
TSC2-220ENST00000568238 GOLT1AQ6ZVE7 132 aa9.22□□□□□ -0.93
TSC2-220ENST00000568238 RXFP4Q8TDU9 374 aa9.22□□□□□ -0.93
TSC2-220ENST00000568238 VGLL1Q99990 258 aa9.22□□□□□ -0.93
TSC2-220ENST00000568238 TRAV12-2A0A075B6T6 113 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 TEX48A0A1B0GUV7 120 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 A0A1W2PRE2 83 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 FAM74A7A6NL05 159 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 J3KRW8 73 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 SUMO1P63165 101 aaKnown RBP9.21□□□□□ -0.94
TSC2-220ENST00000568238 CCL20P78556 96 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 TMEM78Q5T7P6 136 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 CST9LP1Q5W188 147 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 C5orf17Q8NAS9 161 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 Q8TAT8 98 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 NDUFAF3Q9BU61 184 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 AGPAT4-IT1Q9H0P7 198 aa9.21□□□□□ -0.94
TSC2-220ENST00000568238 TEX46H3BTG2 121 aa9.2□□□□□ -0.94
TSC2-220ENST00000568238 PAGE4O60829 102 aa9.2□□□□□ -0.94
TSC2-220ENST00000568238 INSP01308 110 aa9.2□□□□□ -0.94
TSC2-220ENST00000568238 IFNA7P01567 189 aa9.2□□□□□ -0.94
TSC2-220ENST00000568238 HBE1P02100 147 aa9.2□□□□□ -0.94
TSC2-220ENST00000568238 C9orf47Q6ZRZ4 202 aa9.2□□□□□ -0.94
TSC2-220ENST00000568238 GNG13Q9P2W3 67 aa9.2□□□□□ -0.94
TSC2-220ENST00000568238 DKK2Q9UBU2 259 aa9.2□□□□□ -0.94
TSC2-220ENST00000568238 TRAV8-1A0A0A6YYK1 113 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 TRAV1-1A0A0B4J248 108 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 LOC102723971A0A1B0GUV8 181 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 TCRAP04437 139 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 TSPOP30536 169 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 LEPP41159 167 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 ATP5G3P48201 142 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 ZNF138P52744 262 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms