RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	TAS2R30	P59541	319 aa		7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	UBE2M	P61081	183 aa	Known RBP	7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	BTN1A1	Q13410	526 aa		7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	WFDC10B	Q8IUB3	73 aa		7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	TOMM5	Q8N4H5	51 aa		7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	DEDD2	Q8WXF8	326 aa		7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	MRPL53	Q96EL3	112 aa	Known RBP	7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	LINC00477	Q96M19	166 aa		7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	C8orf49	Q96NF6	230 aa		7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	MGST2	Q99735	147 aa		7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	SLIRP	Q9GZT3	109 aa	Known RBP	7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	DNAJC4	Q9NNZ3	241 aa		7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	TRAV5	A0A0B4J249	113 aa		7.66	□□□□□ -1.18
TCF4-238	ENST00000568169		M0R3E3	92 aa		7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	TSC22D2	O75157	780 aa		7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	MPDU1	O75352	247 aa		7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	OR4E1	P0C645	316 aa		7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	CRISP2	P16562	243 aa		7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	EVI2A	P22794	236 aa		7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	RNASE4	P34096	147 aa	Known RBP	7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	ERCC8	Q13216	396 aa		7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	NTN5	Q8WTR8	489 aa	Predicted RBP	7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	RAB2B	Q8WUD1	216 aa		7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	GGACT	Q9BVM4	153 aa		7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	MRPL32	Q9BYC8	188 aa	Known RBP	7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	AGPAT4-IT1	Q9H0P7	198 aa		7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	MRPL16	Q9NX20	251 aa	Known RBP	7.66	□□□□□ -1.18
TCF4-238	ENST00000568169	IGLV5-52	A0A0A0MRZ9	124 aa		7.65	□□□□□ -1.18
TCF4-238	ENST00000568169	LRCOL1	A6NCL2	159 aa		7.65	□□□□□ -1.18
TCF4-238	ENST00000568169	KRTAP29-1	A8MX34	341 aa	Predicted RBP	7.65	□□□□□ -1.18
TCF4-238	ENST00000568169	NMB	P08949	121 aa		7.65	□□□□□ -1.18
TCF4-238	ENST00000568169	VPS13B	Q7Z7G8	4022 aa		7.65	□□□□□ -1.18
TCF4-238	ENST00000568169	IQCF2	Q8IXL9	164 aa		7.65	□□□□□ -1.18
TCF4-238	ENST00000568169	ZFAND2A	Q8N6M9	145 aa		7.65	□□□□□ -1.18
TCF4-238	ENST00000568169	BCL7B	Q9BQE9	202 aa		7.65	□□□□□ -1.18
TCF4-238	ENST00000568169	TP53TG3	Q9ULZ0	132 aa		7.65	□□□□□ -1.18
TCF4-238	ENST00000568169	RCL1	Q9Y2P8	373 aa	Known RBP	7.65	□□□□□ -1.18
TCF4-238	ENST00000568169	TRBV19	A0A075B6N1	114 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169		K7EQD1	137 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	RGS13	O14921	159 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	NDUFB4	O95168	129 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	GPX1	P07203	203 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	SRI	P30626	198 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	CAMLG	P49069	296 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	TMBIM6	P55061	237 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	PYDC2	Q56P42	97 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169		Q6ZRG5	221 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	C9orf47	Q6ZRZ4	202 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	C10orf126	Q8N4M7	172 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	MRPS26	Q9BYN8	205 aa	Known RBP	7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	FAM30A	Q9NZY2	134 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	PRELID1	Q9Y255	219 aa		7.64	□□□□□ -1.19
TCF4-238	ENST00000568169	IGHV1OR15-1	A0A075B7D0	117 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169	TRGV4	A0A0C4DH28	118 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169	C7orf66	A4D0T2	115 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169		E5RGE8	158 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169	SCGB1D2	O95969	90 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169	C1QB	P02746	253 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169	CRYGD	P07320	174 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169	IAH1	Q2TAA2	248 aa	Predicted RBP	7.63	□□□□□ -1.19
TCF4-238	ENST00000568169	PRR9	Q5T870	116 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169	MIC13	Q5XKP0	118 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169		Q6ZQT7	251 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169	NRARP	Q7Z6K4	114 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169	OR1L4	Q8NGR5	311 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169		V9GYH0	126 aa		7.63	□□□□□ -1.19
TCF4-238	ENST00000568169	PLA2G1B	P04054	148 aa	Known RBP	7.62	□□□□□ -1.19
TCF4-238	ENST00000568169	HIST1H1E	P10412	219 aa	Known RBP	7.62	□□□□□ -1.19
TCF4-238	ENST00000568169	GYPE	P15421	78 aa		7.62	□□□□□ -1.19
TCF4-238	ENST00000568169	RAB31	Q13636	194 aa		7.62	□□□□□ -1.19
TCF4-238	ENST00000568169	ZNF479	Q96JC4	524 aa		7.62	□□□□□ -1.19
TCF4-238	ENST00000568169	PFDN5	Q99471	154 aa		7.62	□□□□□ -1.19
TCF4-238	ENST00000568169	ARPC5L	Q9BPX5	153 aa		7.62	□□□□□ -1.19
TCF4-238	ENST00000568169	TMEM14C	Q9P0S9	112 aa		7.62	□□□□□ -1.19
TCF4-238	ENST00000568169	PSCA	O43653	123 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	NDUFB6	O95139	128 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	MBP	P02686	304 aa	Predicted RBP	7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	ORM1	P02763	201 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	SFTA3	P0C7M3	94 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	RPL29	P47914	159 aa	Known RBP	7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	ZNF415	Q09FC8	603 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	PDE6H	Q13956	83 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	EXOC3-AS1	Q8N2X6	119 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	C12orf45	Q8N5I9	185 aa	Predicted RBP	7.61	□□□□□ -1.19
TCF4-238	ENST00000568169		Q8N814	137 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	OR10G4	Q8NGN3	311 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	PCNP	Q8WW12	178 aa	Known RBP	7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	SLC39A9	Q9NUM3	307 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	GSKIP	Q9P0R6	139 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	ZNF492	Q9P255	531 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	FLVCR2	Q9UPI3	526 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	WDR83OS	Q9Y284	106 aa		7.61	□□□□□ -1.19
TCF4-238	ENST00000568169	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.6	□□□□□ -1.19
TCF4-238	ENST00000568169		H3BMQ9	156 aa		7.6	□□□□□ -1.19
TCF4-238	ENST00000568169	IGKV2D-40	P01614	121 aa	Predicted RBP	7.6	□□□□□ -1.19
TCF4-238	ENST00000568169	TIRAP	P58753	221 aa		7.6	□□□□□ -1.19
TCF4-238	ENST00000568169	SERTAD4-AS1	Q5TG53	156 aa		7.6	□□□□□ -1.19
TCF4-238	ENST00000568169	RASL10A	Q92737	203 aa		7.6	□□□□□ -1.19
TCF4-238	ENST00000568169	TXNDC17	Q9BRA2	123 aa		7.6	□□□□□ -1.19
TCF4-238	ENST00000568169	SRR	Q9GZT4	340 aa		7.6	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms