RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 G3V3Q6 166 aa17.9■□□□□ 0.46
FANCA-228ENST00000567943 H7BYZ3 331 aa17.9■□□□□ 0.46
FANCA-228ENST00000567943 IGKV2D-40P01614 121 aaPredicted RBP17.9■□□□□ 0.46
FANCA-228ENST00000567943 OR2G3Q8NGZ4 309 aa17.9■□□□□ 0.46
FANCA-228ENST00000567943 LINC00477Q96M19 166 aa17.9■□□□□ 0.46
FANCA-228ENST00000567943 C20orf144Q9BQM9 153 aa17.9■□□□□ 0.46
FANCA-228ENST00000567943 PSMG3Q9BT73 122 aaPredicted RBP17.9■□□□□ 0.46
FANCA-228ENST00000567943 Q9H3A6 140 aa17.89■□□□□ 0.45
FANCA-228ENST00000567943 DNAH2Q9P225 4427 aa17.88■□□□□ 0.45
FANCA-228ENST00000567943 HMGB3O15347 200 aaKnown RBP17.88■□□□□ 0.45
FANCA-228ENST00000567943 RPL7L1Q6DKI1 246 aaKnown RBP17.88■□□□□ 0.45
FANCA-228ENST00000567943 C9orf47Q6ZRZ4 202 aa17.88■□□□□ 0.45
FANCA-228ENST00000567943 LYPD1Q8N2G4 141 aa17.88■□□□□ 0.45
FANCA-228ENST00000567943 VGLL1Q99990 258 aa17.88■□□□□ 0.45
FANCA-228ENST00000567943 TRAV12-3A0A0B4J271 114 aa17.87■□□□□ 0.45
FANCA-228ENST00000567943 DAD1P61803 113 aa17.87■□□□□ 0.45
FANCA-228ENST00000567943 PQLC2Q6ZP29 291 aa17.87■□□□□ 0.45
FANCA-228ENST00000567943 SH3BGRL3Q9H299 93 aa17.87■□□□□ 0.45
FANCA-228ENST00000567943 PLAC8L1A1L4L8 177 aa17.86■□□□□ 0.45
FANCA-228ENST00000567943 SMLR1H3BR10 107 aa17.86■□□□□ 0.45
FANCA-228ENST00000567943 CSN1S1P47710 185 aa17.86■□□□□ 0.45
FANCA-228ENST00000567943 CDC34P49427 236 aaPredicted RBP17.86■□□□□ 0.45
FANCA-228ENST00000567943 TMEM78Q5T7P6 136 aa17.86■□□□□ 0.45
FANCA-228ENST00000567943 C16orf74Q96GX8 76 aa17.86■□□□□ 0.45
FANCA-228ENST00000567943 FAM19A4Q96LR4 140 aa17.86■□□□□ 0.45
FANCA-228ENST00000567943 BORCS7-ASMTA0A0B4J1R7 106 aa17.85■□□□□ 0.45
FANCA-228ENST00000567943 LYRM9A8MSI8 78 aa17.85■□□□□ 0.45
FANCA-228ENST00000567943 ARPC5O15511 151 aa17.85■□□□□ 0.45
FANCA-228ENST00000567943 SLC25A5P05141 298 aaKnown RBP17.85■□□□□ 0.45
FANCA-228ENST00000567943 HTN3P15516 51 aa17.85■□□□□ 0.45
FANCA-228ENST00000567943 SERF2P84101 59 aa17.85■□□□□ 0.45
FANCA-228ENST00000567943 ZNF493Q6ZR52 646 aa17.84■□□□□ 0.45
FANCA-228ENST00000567943 TMEM263Q8WUH6 116 aaKnown RBP17.84■□□□□ 0.45
FANCA-228ENST00000567943 C7orf71A4D174 169 aa17.83■□□□□ 0.44
FANCA-228ENST00000567943 KLLNB2CW77 178 aa17.83■□□□□ 0.44
FANCA-228ENST00000567943 MBP02144 154 aa17.83■□□□□ 0.44
FANCA-228ENST00000567943 ARL14EPLP0DKL9 152 aa17.83■□□□□ 0.44
FANCA-228ENST00000567943 CCDC28AQ8IWP9 274 aa17.83■□□□□ 0.44
FANCA-228ENST00000567943 RNASE8Q8TDE3 154 aaKnown RBP17.83■□□□□ 0.44
FANCA-228ENST00000567943 RAB24Q969Q5 203 aa17.83■□□□□ 0.44
FANCA-228ENST00000567943 GNPNAT1Q96EK6 184 aaPredicted RBP17.83■□□□□ 0.44
FANCA-228ENST00000567943 HYLS1Q96M11 299 aa17.83■□□□□ 0.44
FANCA-228ENST00000567943 OTORQ9NRC9 128 aa17.83■□□□□ 0.44
FANCA-228ENST00000567943 ZNF492Q9P255 531 aa17.83■□□□□ 0.44
FANCA-228ENST00000567943 DEFB130BP0DP73 79 aa17.82■□□□□ 0.44
FANCA-228ENST00000567943 DEFB130AP0DP74 79 aa17.82■□□□□ 0.44
FANCA-228ENST00000567943 CRISP2P16562 243 aa17.82■□□□□ 0.44
FANCA-228ENST00000567943 CD300CQ08708 224 aa17.82■□□□□ 0.44
FANCA-228ENST00000567943 BTN1A1Q13410 526 aa17.82■□□□□ 0.44
FANCA-228ENST00000567943 HECTD4Q9Y4D8 3996 aa17.82■□□□□ 0.44
FANCA-228ENST00000567943 FAT2Q9NYQ8 4349 aa17.81■□□□□ 0.44
FANCA-228ENST00000567943 PGPA6NDG6 321 aa17.81■□□□□ 0.44
FANCA-228ENST00000567943 GPX1P07203 203 aa17.81■□□□□ 0.44
FANCA-228ENST00000567943 STAG3L2P0CL84 134 aa17.81■□□□□ 0.44
FANCA-228ENST00000567943 STAG3L3P0CL85 134 aa17.81■□□□□ 0.44
FANCA-228ENST00000567943 RNASE4P34096 147 aaKnown RBP17.81■□□□□ 0.44
FANCA-228ENST00000567943 ZNF138P52744 262 aa17.81■□□□□ 0.44
FANCA-228ENST00000567943 Q8TAT8 98 aa17.81■□□□□ 0.44
FANCA-228ENST00000567943 RXFP4Q8TDU9 374 aa17.81■□□□□ 0.44
FANCA-228ENST00000567943 PYGO2Q9BRQ0 406 aa17.81■□□□□ 0.44
FANCA-228ENST00000567943 TIMM8BQ9Y5J9 83 aaPredicted RBP17.81■□□□□ 0.44
FANCA-228ENST00000567943 RBAKDNA6NC62 111 aa17.8■□□□□ 0.44
FANCA-228ENST00000567943 DIRC3C9JPN6 131 aa17.8■□□□□ 0.44
FANCA-228ENST00000567943 FAM74A1Q5RGS3 127 aa17.8■□□□□ 0.44
FANCA-228ENST00000567943 ZFAND2AQ8N6M9 145 aa17.8■□□□□ 0.44
FANCA-228ENST00000567943 CMTM2Q8TAZ6 248 aa17.8■□□□□ 0.44
FANCA-228ENST00000567943 NDUFAF3Q9BU61 184 aa17.8■□□□□ 0.44
FANCA-228ENST00000567943 NOP10Q9NPE3 64 aaKnown RBP17.8■□□□□ 0.44
FANCA-228ENST00000567943 RPH3ALQ9UNE2 315 aa17.8■□□□□ 0.44
FANCA-228ENST00000567943 TAAR5O14804 337 aa17.79■□□□□ 0.44
FANCA-228ENST00000567943 NMBP08949 121 aa17.79■□□□□ 0.44
FANCA-228ENST00000567943 PRR9Q5T870 116 aa17.79■□□□□ 0.44
FANCA-228ENST00000567943 ACTR3CQ9C0K3 210 aaPredicted RBP17.79■□□□□ 0.44
FANCA-228ENST00000567943 DNAH17Q9UFH2 4485 aa17.79■□□□□ 0.44
FANCA-228ENST00000567943 ZNF324O75467 553 aaPredicted RBP17.78■□□□□ 0.44
FANCA-228ENST00000567943 GCHFRP30047 84 aa17.77■□□□□ 0.44
FANCA-228ENST00000567943 CYTL1Q9NRR1 136 aa17.77■□□□□ 0.44
FANCA-228ENST00000567943 SSX7Q7RTT5 188 aa17.76■□□□□ 0.43
FANCA-228ENST00000567943 FAM210BQ96KR6 192 aa17.76■□□□□ 0.43
FANCA-228ENST00000567943 TRBV7-9A0A0J9YWB2 115 aa17.75■□□□□ 0.43
FANCA-228ENST00000567943 SNURFLB1AK76 121 aa17.75■□□□□ 0.43
FANCA-228ENST00000567943 CXorf1O96002 111 aa17.75■□□□□ 0.43
FANCA-228ENST00000567943 Q6ZQT7 251 aa17.74■□□□□ 0.43
FANCA-228ENST00000567943 GOLT1AQ6ZVE7 132 aa17.74■□□□□ 0.43
FANCA-228ENST00000567943 OR11H4Q8NGC9 324 aa17.74■□□□□ 0.43
FANCA-228ENST00000567943 SUN5Q8TC36 379 aa17.74■□□□□ 0.43
FANCA-228ENST00000567943 LINC00467Q9BRT7 94 aa17.74■□□□□ 0.43
FANCA-228ENST00000567943 CBY3A6NI87 242 aa17.73■□□□□ 0.43
FANCA-228ENST00000567943 GNG5P63218 68 aa17.73■□□□□ 0.43
FANCA-228ENST00000567943 AKR1C8PQ5T2L2 129 aa17.73■□□□□ 0.43
FANCA-228ENST00000567943 TMEM88Q6PEY1 159 aa17.73■□□□□ 0.43
FANCA-228ENST00000567943 IQCF2Q8IXL9 164 aa17.73■□□□□ 0.43
FANCA-228ENST00000567943 KCNRGQ8N5I3 272 aa17.73■□□□□ 0.43
FANCA-228ENST00000567943 EIF4E3Q8N5X7 224 aaKnown RBP17.73■□□□□ 0.43
FANCA-228ENST00000567943 ARL6IP6Q8N6S5 226 aa17.73■□□□□ 0.43
FANCA-228ENST00000567943 POM121L12Q8N7R1 296 aa17.73■□□□□ 0.43
FANCA-228ENST00000567943 TMEM167BQ9NRX6 74 aa17.73■□□□□ 0.43
FANCA-228ENST00000567943 RGS13O14921 159 aa17.72■□□□□ 0.43
FANCA-228ENST00000567943 ATP5G1P05496 136 aa17.72■□□□□ 0.43
FANCA-228ENST00000567943 P0DMU3 169 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms