RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 LINC00477Q96M19 166 aa9.18□□□□□ -0.94
GINS3-209ENST00000567909 ODF3Q96PU9 254 aa9.18□□□□□ -0.94
GINS3-209ENST00000567909 NEU1Q99519 415 aa9.18□□□□□ -0.94
GINS3-209ENST00000567909 TENM2Q9NT68 2774 aa9.18□□□□□ -0.94
GINS3-209ENST00000567909 CSMD3Q7Z407 3707 aa9.18□□□□□ -0.94
GINS3-209ENST00000567909 MAP1LC3B2A6NCE7 125 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 SMIM9A6NGZ8 99 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 ZNF705GA8MUZ8 300 aaPredicted RBP9.17□□□□□ -0.94
GINS3-209ENST00000567909 PRM2P04554 102 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 SEC11BP0C7V7 166 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 TPT1P13693 172 aaKnown RBP9.17□□□□□ -0.94
GINS3-209ENST00000567909 HTN1P15515 57 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 FHITP49789 147 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 NANOS2P60321 138 aaKnown RBP9.17□□□□□ -0.94
GINS3-209ENST00000567909 RRN3P1Q2M238 152 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 C9orf47Q6ZRZ4 202 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 C11orf45Q8TAV5 145 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 RXFP4Q8TDU9 374 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 TMED6Q8WW62 240 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 LINC01587Q99440 93 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 MAP1LC3BQ9GZQ8 125 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 TMPRSS5Q9H3S3 457 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 TMEM167BQ9NRX6 74 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 PLA2G2EQ9NZK7 142 aa9.17□□□□□ -0.94
GINS3-209ENST00000567909 LOC102723971A0A1B0GUV8 181 aa9.16□□□□□ -0.94
GINS3-209ENST00000567909 DIRC3C9JPN6 131 aa9.16□□□□□ -0.94
GINS3-209ENST00000567909 SLC25A5P05141 298 aaKnown RBP9.16□□□□□ -0.94
GINS3-209ENST00000567909 GNG5P63218 68 aa9.16□□□□□ -0.94
GINS3-209ENST00000567909 GFI1BQ5VTD9 330 aa9.16□□□□□ -0.94
GINS3-209ENST00000567909 EIF5AL1Q6IS14 154 aaKnown RBP9.16□□□□□ -0.94
GINS3-209ENST00000567909 TMEM256Q8N2U0 113 aa9.16□□□□□ -0.94
GINS3-209ENST00000567909 Q8TAT8 98 aa9.16□□□□□ -0.94
GINS3-209ENST00000567909 FAM213BQ8TBF2 198 aa9.16□□□□□ -0.94
GINS3-209ENST00000567909 SUN5Q8TC36 379 aa9.16□□□□□ -0.94
GINS3-209ENST00000567909 STARD9Q9P2P6 4700 aa9.15□□□□□ -0.94
GINS3-209ENST00000567909 TRAV12-3A0A0B4J271 114 aa9.15□□□□□ -0.94
GINS3-209ENST00000567909 UMAD1C9J7I0 102 aa9.15□□□□□ -0.94
GINS3-209ENST00000567909 ZNF138P52744 262 aa9.15□□□□□ -0.94
GINS3-209ENST00000567909 UBE2G2P60604 165 aa9.15□□□□□ -0.94
GINS3-209ENST00000567909 GOLT1AQ6ZVE7 132 aa9.15□□□□□ -0.94
GINS3-209ENST00000567909 STOML3Q8TAV4 291 aa9.15□□□□□ -0.94
GINS3-209ENST00000567909 ZNF492Q9P255 531 aa9.15□□□□□ -0.94
GINS3-209ENST00000567909 CELA1Q9UNI1 258 aa9.15□□□□□ -0.94
GINS3-209ENST00000567909 A0A1B0GV50 99 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 C7orf71A4D174 169 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 TMEM189A5PLL7 270 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 RBAKDNA6NC62 111 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 GPX1P07203 203 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
GINS3-209ENST00000567909 SUMO1P63165 101 aaKnown RBP9.14□□□□□ -0.95
GINS3-209ENST00000567909 BTN1A1Q13410 526 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 ZNF767PQ75MW2 155 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 SLC51BQ86UW2 128 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 C9orf62Q8N4C0 152 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 C5orf17Q8NAS9 161 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 C20orf144Q9BQM9 153 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 NIPSNAP3BQ9BS92 247 aa9.14□□□□□ -0.95
GINS3-209ENST00000567909 GGTLC3B5MD39 225 aa9.13□□□□□ -0.95
GINS3-209ENST00000567909 H7BYZ3 331 aa9.13□□□□□ -0.95
GINS3-209ENST00000567909 AZU1P20160 251 aa9.13□□□□□ -0.95
GINS3-209ENST00000567909 TAS2R60P59551 318 aa9.13□□□□□ -0.95
GINS3-209ENST00000567909 SFT2D1Q8WV19 159 aa9.13□□□□□ -0.95
GINS3-209ENST00000567909 PHLDA1Q8WV24 401 aaPredicted RBP9.13□□□□□ -0.95
GINS3-209ENST00000567909 FAM19A4Q96LR4 140 aa9.13□□□□□ -0.95
GINS3-209ENST00000567909 YTHDF2Q9Y5A9 579 aaKnown RBP9.13□□□□□ -0.95
GINS3-209ENST00000567909 DYNC2H1Q8NCM8 4307 aaKnown RBP9.12□□□□□ -0.95
GINS3-209ENST00000567909 TRAV8-1A0A0A6YYK1 113 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 A0A1W2PRE2 83 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 NUPR2A6NF83 97 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 KLLNB2CW77 178 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 IFNA7P01567 189 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 SPART-AS1P0CW21 52 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 CRISP2P16562 243 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 NKX2-5P52952 324 aaPredicted RBP9.12□□□□□ -0.95
GINS3-209ENST00000567909 PRR9Q5T870 116 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 FAM222AQ5U5X8 452 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 DPPA3Q6W0C5 159 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 ZFAND2AQ8N6M9 145 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 ARL6IP6Q8N6S5 226 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 SGK494Q96LW2 274 aa9.12□□□□□ -0.95
GINS3-209ENST00000567909 FAM74A7A6NL05 159 aa9.11□□□□□ -0.95
GINS3-209ENST00000567909 K7EQM0 130 aa9.11□□□□□ -0.95
GINS3-209ENST00000567909 TCRAP04437 139 aa9.11□□□□□ -0.95
GINS3-209ENST00000567909 NMBP08949 121 aa9.11□□□□□ -0.95
GINS3-209ENST00000567909 H2AFB1P0C5Y9 115 aa9.11□□□□□ -0.95
GINS3-209ENST00000567909 C12orf74Q32Q52 190 aa9.11□□□□□ -0.95
GINS3-209ENST00000567909 CEMP1Q6PRD7 247 aaPredicted RBP9.11□□□□□ -0.95
GINS3-209ENST00000567909 Q6ZTC4 211 aa9.11□□□□□ -0.95
GINS3-209ENST00000567909 CCDC28AQ8IWP9 274 aa9.11□□□□□ -0.95
GINS3-209ENST00000567909 DKK2Q9UBU2 259 aa9.11□□□□□ -0.95
GINS3-209ENST00000567909 EPDR1Q9UM22 224 aa9.11□□□□□ -0.95
GINS3-209ENST00000567909 CST9LP1Q5W188 147 aa9.1□□□□□ -0.95
GINS3-209ENST00000567909 MBD3L1Q8WWY6 194 aa9.1□□□□□ -0.95
GINS3-209ENST00000567909 C16orf74Q96GX8 76 aa9.1□□□□□ -0.95
GINS3-209ENST00000567909 PYGO2Q9BRQ0 406 aa9.1□□□□□ -0.95
GINS3-209ENST00000567909 LENEPQ9Y5L5 61 aa9.1□□□□□ -0.95
GINS3-209ENST00000567909 TRBV7-9A0A0J9YWB2 115 aa9.09□□□□□ -0.95
GINS3-209ENST00000567909 SERTM2A0A1B0GWG4 89 aa9.09□□□□□ -0.95
GINS3-209ENST00000567909 F6UZH7 168 aa9.09□□□□□ -0.95
GINS3-209ENST00000567909 ZNF324O75467 553 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms