RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 TMEM78Q5T7P6 136 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 GFI1BQ5VTD9 330 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 ZNF767PQ75MW2 155 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 THAP6Q8TBB0 222 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 RNF141Q8WVD5 230 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 PAXXQ9BUH6 204 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 TP53TG3Q9ULZ0 132 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 C7orf71A4D174 169 aa7.89□□□□□ -1.15
CDH3-206ENST00000567674 PRAC2D3DTV9 90 aa7.89□□□□□ -1.15
CDH3-206ENST00000567674 M6PRP20645 277 aa7.89□□□□□ -1.15
CDH3-206ENST00000567674 CLINT1Q14677 625 aa7.89□□□□□ -1.15
CDH3-206ENST00000567674 ACOT6Q3I5F7 207 aaPredicted RBP7.89□□□□□ -1.15
CDH3-206ENST00000567674 SOHLH1Q5JUK2 328 aa7.89□□□□□ -1.15
CDH3-206ENST00000567674 FAM74A1Q5RGS3 127 aa7.89□□□□□ -1.15
CDH3-206ENST00000567674 PQLC2Q6ZP29 291 aa7.89□□□□□ -1.15
CDH3-206ENST00000567674 ZNF492Q9P255 531 aa7.89□□□□□ -1.15
CDH3-206ENST00000567674 DNAH2Q9P225 4427 aa7.88□□□□□ -1.15
CDH3-206ENST00000567674 SERTM2A0A1B0GWG4 89 aa7.88□□□□□ -1.15
CDH3-206ENST00000567674 MBP02144 154 aa7.88□□□□□ -1.15
CDH3-206ENST00000567674 MED14OSP0DP75 135 aa7.88□□□□□ -1.15
CDH3-206ENST00000567674 SERF2P84101 59 aa7.88□□□□□ -1.15
CDH3-206ENST00000567674 SLAQ13239 276 aa7.88□□□□□ -1.15
CDH3-206ENST00000567674 TMEM88Q6PEY1 159 aa7.88□□□□□ -1.15
CDH3-206ENST00000567674 EIF4E3Q8N5X7 224 aaKnown RBP7.88□□□□□ -1.15
CDH3-206ENST00000567674 FXYD5Q96DB9 178 aa7.88□□□□□ -1.15
CDH3-206ENST00000567674 AGPAT4-IT1Q9H0P7 198 aa7.88□□□□□ -1.15
CDH3-206ENST00000567674 A0A1W2PPV4 95 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 GPX1P07203 203 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 DEFB130BP0DP73 79 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 DEFB130AP0DP74 79 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 PYYP10082 97 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 ZNF138P52744 262 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 CCL18P55774 89 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 ICAM4Q14773 271 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 GCSAMLQ5JQS6 135 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 Q6ZR54 194 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 MIR17HGQ75NE6 70 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 UBE2DNLQ8IWF7 75 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 OR2G3Q8NGZ4 309 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 AQP10Q96PS8 301 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 PSMG3Q9BT73 122 aaPredicted RBP7.87□□□□□ -1.15
CDH3-206ENST00000567674 NOP10Q9NPE3 64 aaKnown RBP7.87□□□□□ -1.15
CDH3-206ENST00000567674 MBD2Q9UBB5 411 aa7.87□□□□□ -1.15
CDH3-206ENST00000567674 TRAV12-3A0A0B4J271 114 aa7.86□□□□□ -1.15
CDH3-206ENST00000567674 FBLL1A6NHQ2 334 aaKnown RBP7.86□□□□□ -1.15
CDH3-206ENST00000567674 F5H768 121 aa7.86□□□□□ -1.15
CDH3-206ENST00000567674 M0R3E3 92 aa7.86□□□□□ -1.15
CDH3-206ENST00000567674 OR7C2O60412 319 aa7.86□□□□□ -1.15
CDH3-206ENST00000567674 HTN1P15515 57 aa7.86□□□□□ -1.15
CDH3-206ENST00000567674 FFAR4Q5NUL3 377 aa7.86□□□□□ -1.15
CDH3-206ENST00000567674 BLNKQ8WV28 456 aa7.86□□□□□ -1.15
CDH3-206ENST00000567674 OTORQ9NRC9 128 aa7.86□□□□□ -1.15
CDH3-206ENST00000567674 ABCA13Q86UQ4 5058 aa7.86□□□□□ -1.15
CDH3-206ENST00000567674 H3BTX0 84 aa7.85□□□□□ -1.15
CDH3-206ENST00000567674 GIPP09681 153 aaPredicted RBP7.85□□□□□ -1.15
CDH3-206ENST00000567674 HTN3P15516 51 aa7.85□□□□□ -1.15
CDH3-206ENST00000567674 TCL1AP56279 114 aa7.85□□□□□ -1.15
CDH3-206ENST00000567674 EXOC3-AS1Q8N2X6 119 aa7.85□□□□□ -1.15
CDH3-206ENST00000567674 ZFAND2AQ8N6M9 145 aa7.85□□□□□ -1.15
CDH3-206ENST00000567674 ATG101Q9BSB4 218 aa7.85□□□□□ -1.15
CDH3-206ENST00000567674 MED28Q9H204 178 aa7.85□□□□□ -1.15
CDH3-206ENST00000567674 PLA2G2EQ9NZK7 142 aa7.85□□□□□ -1.15
CDH3-206ENST00000567674 DNAH17Q9UFH2 4485 aa7.85□□□□□ -1.15
CDH3-206ENST00000567674 FAT2Q9NYQ8 4349 aa7.84□□□□□ -1.15
CDH3-206ENST00000567674 SNRPCP09234 159 aaKnown RBP7.84□□□□□ -1.15
CDH3-206ENST00000567674 RANP62826 216 aaKnown RBP7.84□□□□□ -1.15
CDH3-206ENST00000567674 UBE2L3P68036 154 aaKnown RBP7.84□□□□□ -1.15
CDH3-206ENST00000567674 TDRG1Q3Y452 100 aa7.84□□□□□ -1.15
CDH3-206ENST00000567674 Q6AWC8 147 aa7.84□□□□□ -1.15
CDH3-206ENST00000567674 C11orf72Q8NBR9 251 aa7.84□□□□□ -1.15
CDH3-206ENST00000567674 SUN5Q8TC36 379 aa7.84□□□□□ -1.15
CDH3-206ENST00000567674 GNPNAT1Q96EK6 184 aaPredicted RBP7.84□□□□□ -1.15
CDH3-206ENST00000567674 UPK3BQ9BT76 320 aa7.84□□□□□ -1.15
CDH3-206ENST00000567674 Q9H3A6 140 aa7.84□□□□□ -1.15
CDH3-206ENST00000567674 ALG5Q9Y673 324 aa7.84□□□□□ -1.15
CDH3-206ENST00000567674 IGHV1OR15-1A0A075B7D0 117 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 A0A1W2PPQ1 181 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 DIRC3C9JPN6 131 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 CIDEAO60543 219 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 SPINK4O60575 86 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 PRM2P04554 102 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 ERCC8Q13216 396 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 KIR3DS1Q14943 382 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 FAM122CQ6P4D5 195 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 IQCF2Q8IXL9 164 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 INO80EQ8NBZ0 244 aaPredicted RBP7.83□□□□□ -1.16
CDH3-206ENST00000567674 CMTM2Q8TAZ6 248 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 SPXQ9BT56 116 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 TNFSF18Q9UNG2 199 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 KLF12Q9Y4X4 402 aa7.83□□□□□ -1.16
CDH3-206ENST00000567674 K7EP13 123 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 TAAR5O14804 337 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 RGS13O14921 159 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 OR10J4P0C629 311 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 STAG3L2P0CL84 134 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 STAG3L3P0CL85 134 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 RNASE4P34096 147 aaKnown RBP7.82□□□□□ -1.16
CDH3-206ENST00000567674 FCN2Q15485 313 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 TTC32Q5I0X7 151 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms