RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 ACANP16112 2415 aa6.71□□□□□ -1.33
LSM3P5-201ENST00000566307 HIVEP2P31629 2446 aa6.71□□□□□ -1.33
LSM3P5-201ENST00000566307 IGHV3OR16-13A0A075B7E8 117 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 IGHV3-74A0A0B4J1X5 117 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 IGHV3-66A0A0C4DH42 116 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST1H2BKO60814 126 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST1H2BJP06899 126 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST1H2BOP23527 126 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST1H2BBP33778 126 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 ID1P41134 155 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST1H2BDP58876 126 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 RPS20P60866 119 aaKnown RBP6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST1H2BCP62807 126 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 FHL3Q13643 280 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST2H2BEQ16778 126 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 COA6Q5JTJ3 125 aaKnown RBP6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 CDPF1Q6NVV7 123 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 LINC01006Q8NI28 216 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST1H2BHQ93079 126 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 C16orf92Q96LL3 132 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 LINC00477Q96M19 166 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 DUX5Q96PT3 197 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST1H2BNQ99877 126 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST1H2BMQ99879 126 aa6.71□□□□□ -1.34
LSM3P5-201ENST00000566307 IGKV2-40A0A087WW87 121 aaPredicted RBP6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 IGHV3-49A0A0A0MS15 119 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 C2orf70A6NJV1 201 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 M0QZ24 198 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 UBE2CO00762 179 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 IGKV2D-40P01614 121 aaPredicted RBP6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 HLA-DQA1P01909 254 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 S100A6P06703 90 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 HLA-DMBP28068 263 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 ZNF138P52744 262 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 SMUG1Q53HV7 270 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 FAM162BQ5T6X4 162 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 TMEM78Q5T7P6 136 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 PRR27Q6MZM9 219 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 TCF24Q7RTU0 167 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 APRG1Q8IVJ8 170 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 OR1N2Q8NGR9 330 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 DCANP1Q8TF63 244 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 SGK494Q96LW2 274 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 ASCL2Q99929 193 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 VGLL1Q99990 258 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 AGPAT4-IT1Q9H0P7 198 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 SIGLEC8Q9NYZ4 499 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 PEMTQ9UBM1 199 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 CSMD2Q7Z408 3487 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 HECTD1Q9ULT8 2610 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 NBPF19A0A087WUL8 3843 aa6.7□□□□□ -1.34
LSM3P5-201ENST00000566307 VPS13CQ709C8 3753 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 A0A1B0GUS0 222 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 A0A1B0GW15 77 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 A0A1B0GXF2 115 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 XKRY2A2RUG3 117 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 ZNF705FA8MVS1 300 aaPredicted RBP6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 PRAC2D3DTV9 90 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 K7EQG2 157 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 TRGC1P0CF51 173 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 CBLN1P23435 193 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 CRIP1P50238 77 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 SYNJ2BPP57105 145 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 HIST1H1AQ02539 215 aaPredicted RBP6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 SHISA2Q6UWI4 295 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 RBPMS2Q6ZRY4 209 aaKnown RBP6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 RNF182Q8N6D2 247 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 GATD1Q8NB37 220 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 NUP35Q8NFH5 326 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 FRZBQ92765 325 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 FAM19A4Q96LR4 140 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 ODF3Q96PU9 254 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 NEU1Q99519 415 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 TRAPPC1Q9Y5R8 145 aa6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 TSSC4Q9Y5U2 329 aaPredicted RBP6.69□□□□□ -1.34
LSM3P5-201ENST00000566307 FABP5P3A8MUU1 101 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 HIGD1CA8MV81 97 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 SH2D1AO60880 128 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 S100A8P05109 93 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 CRISP2P16562 243 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 HOXA5P20719 270 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 PROK1P58294 105 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 IGFL4Q6B9Z1 124 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 TMEM136Q6ZRR5 245 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 ZFP82Q8N141 532 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 ZNF738Q8NE65 137 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 KLHL30-AS1Q8NEE0 82 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 OR11H1Q8NG94 326 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 OR2D3Q8NGH3 330 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 OR9G4Q8NGQ1 327 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 OR10J6PQ8NGY7 276 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 DPF1Q92782 380 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 C20orf173Q96LM9 149 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 C8orf49Q96NF6 230 aa6.68□□□□□ -1.34
LSM3P5-201ENST00000566307 TRAV25A0A0B4J276 109 aa6.67□□□□□ -1.34
LSM3P5-201ENST00000566307 TMEM189A5PLL7 270 aa6.67□□□□□ -1.34
LSM3P5-201ENST00000566307 TCF21O43680 179 aa6.67□□□□□ -1.34
LSM3P5-201ENST00000566307 CRLF1O75462 422 aa6.67□□□□□ -1.34
LSM3P5-201ENST00000566307 CA1P00915 261 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms