RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 WFDC1Q9HC57 220 aa7.78□□□□□ -1.16
CAPN3-215ENST00000565559 LINC00588Q9Y4M8 146 aa7.78□□□□□ -1.16
CAPN3-215ENST00000565559 IGHV3OR16-12A0A075B7B8 117 aa7.77□□□□□ -1.17
CAPN3-215ENST00000565559 FXYD6-FXYD2A0A087WZ82 144 aa7.77□□□□□ -1.17
CAPN3-215ENST00000565559 RNF222A6NCQ9 220 aa7.77□□□□□ -1.17
CAPN3-215ENST00000565559 ZNF705FA8MVS1 300 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-215ENST00000565559 ISLRO14498 428 aa7.77□□□□□ -1.17
CAPN3-215ENST00000565559 ZNF705DP0CH99 300 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-215ENST00000565559 ZNF705BP0CI00 300 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-215ENST00000565559 ZNF266Q14584 549 aa7.77□□□□□ -1.17
CAPN3-215ENST00000565559 RSG1Q9BU20 258 aa7.77□□□□□ -1.17
CAPN3-215ENST00000565559 A0A087X0K7 114 aa7.76□□□□□ -1.17
CAPN3-215ENST00000565559 A0A1W2PPQ1 181 aa7.76□□□□□ -1.17
CAPN3-215ENST00000565559 SOCS3O14543 225 aa7.76□□□□□ -1.17
CAPN3-215ENST00000565559 MRPS12O15235 138 aaKnown RBP7.76□□□□□ -1.17
CAPN3-215ENST00000565559 PSMB3P49720 205 aa7.76□□□□□ -1.17
CAPN3-215ENST00000565559 BPIFA4PQ86YQ2 179 aa7.76□□□□□ -1.17
CAPN3-215ENST00000565559 Q9H3A6 140 aa7.76□□□□□ -1.17
CAPN3-215ENST00000565559 TIMM9Q9Y5J7 89 aa7.76□□□□□ -1.17
CAPN3-215ENST00000565559 HMSDA8MTL9 139 aa7.75□□□□□ -1.17
CAPN3-215ENST00000565559 ERVFC1-1P60608 527 aa7.75□□□□□ -1.17
CAPN3-215ENST00000565559 PSMG4Q5JS54 123 aa7.75□□□□□ -1.17
CAPN3-215ENST00000565559 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.75□□□□□ -1.17
CAPN3-215ENST00000565559 SSX7Q7RTT5 188 aa7.75□□□□□ -1.17
CAPN3-215ENST00000565559 KRTAP1-5Q9BYS1 174 aa7.75□□□□□ -1.17
CAPN3-215ENST00000565559 YTHDF2Q9Y5A9 579 aaKnown RBP7.75□□□□□ -1.17
CAPN3-215ENST00000565559 BORCS7-ASMTA0A0B4J1R7 106 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 ZNF561-AS1K7EIQ3 104 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 TAAR5O14804 337 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 ARPC5O15511 151 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 HBE1P02100 147 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 CXCL2P19875 107 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 FUSP35637 526 aaKnown RBP eCLIP7.74□□□□□ -1.17
CAPN3-215ENST00000565559 KRTAP10-1P60331 282 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 C21orf62-AS1Q17RA5 79 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 FFAR4Q5NUL3 377 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 FAM78BQ5VT40 261 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 MORN5Q5VZ52 161 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 ST6GAL2Q96JF0 529 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 C16orf92Q96LL3 132 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 PSMG3Q9BT73 122 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-215ENST00000565559 MRPL32Q9BYC8 188 aaKnown RBP7.74□□□□□ -1.17
CAPN3-215ENST00000565559 TMEM14CQ9P0S9 112 aa7.74□□□□□ -1.17
CAPN3-215ENST00000565559 TRAV5A0A0B4J249 113 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 LOC102723971A0A1B0GUV8 181 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 KRTAP9-7A8MTY7 169 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 SMLR1H3BR10 107 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 IGLC2P0DOY2 106 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 SERF2P84101 59 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 ZNF345Q14585 488 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 GUK1Q16774 197 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 GCSAMLQ5JQS6 135 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 SPATA31B1PQ5VZV4 182 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 LCN15Q6UWW0 184 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 LINC00052Q96N35 136 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 SLC50A1Q9BRV3 221 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 RPRMQ9NS64 109 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 FUT9Q9Y231 359 aa7.73□□□□□ -1.17
CAPN3-215ENST00000565559 TRAV8-2A0A0B4J237 113 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 F5H768 121 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 ZNF253O75346 499 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 HIST1H1EP10412 219 aaKnown RBP7.72□□□□□ -1.17
CAPN3-215ENST00000565559 RHOBP62745 196 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 ACOT6Q3I5F7 207 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-215ENST00000565559 RPL7L1Q6DKI1 246 aaKnown RBP7.72□□□□□ -1.17
CAPN3-215ENST00000565559 FOXI2Q6ZQN5 318 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 TCTE3Q8IZS6 198 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 KCNRGQ8N5I3 272 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 HSD17B11Q8NBQ5 300 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 OR11H4Q8NGC9 324 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 OR2G3Q8NGZ4 309 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 LRRC20Q8TCA0 184 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 DEFB104AQ8WTQ1 72 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 GNPNAT1Q96EK6 184 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-215ENST00000565559 SAT2Q96F10 170 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-215ENST00000565559 FAM167A-AS1Q96KT0 104 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 GOLT1BQ9Y3E0 138 aa7.72□□□□□ -1.17
CAPN3-215ENST00000565559 A0A0D9SG52 128 aa7.71□□□□□ -1.18
CAPN3-215ENST00000565559 H3BMM0 161 aa7.71□□□□□ -1.18
CAPN3-215ENST00000565559 H3BQ15 152 aa7.71□□□□□ -1.18
CAPN3-215ENST00000565559 HLA-DRB4P13762 266 aa7.71□□□□□ -1.18
CAPN3-215ENST00000565559 M6PRP20645 277 aa7.71□□□□□ -1.18
CAPN3-215ENST00000565559 ATP6V0CP27449 155 aa7.71□□□□□ -1.18
CAPN3-215ENST00000565559 PSG3Q16557 428 aa7.71□□□□□ -1.18
CAPN3-215ENST00000565559 RRN3P1Q2M238 152 aa7.71□□□□□ -1.18
CAPN3-215ENST00000565559 MIR17HGQ75NE6 70 aa7.71□□□□□ -1.18
CAPN3-215ENST00000565559 SAV1Q9H4B6 383 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-215ENST00000565559 ZNF331Q9NQX6 463 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-215ENST00000565559 HLA-DRB4X5D2U9 266 aa7.71□□□□□ -1.18
CAPN3-215ENST00000565559 A0A0J9YX75 114 aa7.7□□□□□ -1.18
CAPN3-215ENST00000565559 MBP02144 154 aa7.7□□□□□ -1.18
CAPN3-215ENST00000565559 GCSHP23434 173 aa7.7□□□□□ -1.18
CAPN3-215ENST00000565559 LINC00315P59091 139 aa7.7□□□□□ -1.18
CAPN3-215ENST00000565559 TAS2R45P59539 299 aa7.7□□□□□ -1.18
CAPN3-215ENST00000565559 PDE6HQ13956 83 aa7.7□□□□□ -1.18
CAPN3-215ENST00000565559 EBLN2Q6P2I7 272 aa7.7□□□□□ -1.18
CAPN3-215ENST00000565559 SLC25A2Q9BXI2 301 aa7.7□□□□□ -1.18
CAPN3-215ENST00000565559 OR51M1Q9H341 326 aa7.7□□□□□ -1.18
CAPN3-215ENST00000565559 CYTL1Q9NRR1 136 aa7.7□□□□□ -1.18
CAPN3-215ENST00000565559 ZNF586Q9NXT0 402 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms