RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 GUK1Q16774 197 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 Q6ZTI0 123 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 SPATA12Q7Z6I5 190 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 STX12Q86Y82 276 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 CCDC28AQ8IWP9 274 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 TMEM252Q8N6L7 170 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 MAPKAPK5-AS1Q8N8E1 139 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 VSIG2Q96IQ7 327 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 FAM19A4Q96LR4 140 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 PYGO2Q9BRQ0 406 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 TMPRSS5Q9H3S3 457 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 LYRM2Q9NU23 88 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-213ENST00000565173 WDR83OSQ9Y284 106 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 TRBV19A0A075B6N1 114 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 A0A096LPF7 62 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 IGSF23A1L1A6 192 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 SNURFLB1AK76 121 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 KLLNB2CW77 178 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 M0R3E3 92 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 ZNF253O75346 499 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 NDUFB4O95168 129 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 SLC25A5P05141 298 aaKnown RBP5.91□□□□□ -1.46
CAPN3-213ENST00000565173 BTF3P20290 206 aaKnown RBP5.91□□□□□ -1.46
CAPN3-213ENST00000565173 LEPP41159 167 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 RPL29P47914 159 aaKnown RBP5.91□□□□□ -1.46
CAPN3-213ENST00000565173 RAB31Q13636 194 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 Q6ZRG5 221 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 C11orf72Q8NBR9 251 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 CHAC2Q8WUX2 184 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 MRPL53Q96EL3 112 aaKnown RBP5.91□□□□□ -1.46
CAPN3-213ENST00000565173 C18orf15Q96N68 181 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 SLC25A31Q9H0C2 315 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 GSN-AS1Q9NRJ2 163 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 UQCC1Q9NVA1 299 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 MBD2Q9UBB5 411 aa5.91□□□□□ -1.46
CAPN3-213ENST00000565173 MRPS16Q9Y3D3 137 aaKnown RBP5.91□□□□□ -1.46
CAPN3-213ENST00000565173 HERC1Q15751 4861 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 A0A1W2PPQ1 181 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 GIPP09681 153 aaPredicted RBP5.9□□□□□ -1.46
CAPN3-213ENST00000565173 SULT1A1P50225 295 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 HBG1P69891 147 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 HBG2P69892 147 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 CD300CQ08708 224 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 ERCC8Q13216 396 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 TTC32Q5I0X7 151 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 Q8N1X5 172 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 OR1L4Q8NGR5 311 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 THAP6Q8TBB0 222 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 LINC00467Q9BRT7 94 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 AGPAT4-IT1Q9H0P7 198 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 SLC39A9Q9NUM3 307 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 TMEM14CQ9P0S9 112 aa5.9□□□□□ -1.46
CAPN3-213ENST00000565173 C7orf71A4D174 169 aa5.89□□□□□ -1.47
CAPN3-213ENST00000565173 HIST1H1EP10412 219 aaKnown RBP5.89□□□□□ -1.47
CAPN3-213ENST00000565173 S100A11P31949 105 aa5.89□□□□□ -1.47
CAPN3-213ENST00000565173 NHLH2Q02577 135 aa5.89□□□□□ -1.47
CAPN3-213ENST00000565173 ANXA2RQ3ZCQ2 193 aa5.89□□□□□ -1.47
CAPN3-213ENST00000565173 Q6ZQT7 251 aa5.89□□□□□ -1.47
CAPN3-213ENST00000565173 Q6ZRN7 208 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-213ENST00000565173 EXOC3-AS1Q8N2X6 119 aa5.89□□□□□ -1.47
CAPN3-213ENST00000565173 ASB13Q8WXK3 278 aa5.89□□□□□ -1.47
CAPN3-213ENST00000565173 LINC00477Q96M19 166 aa5.89□□□□□ -1.47
CAPN3-213ENST00000565173 PFDN5Q99471 154 aa5.89□□□□□ -1.47
CAPN3-213ENST00000565173 KLF12Q9Y4X4 402 aa5.89□□□□□ -1.47
CAPN3-213ENST00000565173 UBE2L5PA0A1B0GUS4 154 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 SPINK4O60575 86 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 PYYP10082 97 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 CRISP2P16562 243 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 RPL12P30050 165 aaKnown RBP5.88□□□□□ -1.47
CAPN3-213ENST00000565173 BAXQ07812 192 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 BTN1A1Q13410 526 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 PDE6HQ13956 83 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 ATP6V1FQ16864 119 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 Q5BKY6 102 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 GCSAMLQ5JQS6 135 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 PRR9Q5T870 116 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 Q6ZNX1 250 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 C9orf47Q6ZRZ4 202 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 EIF4E3Q8N5X7 224 aaKnown RBP5.88□□□□□ -1.47
CAPN3-213ENST00000565173 ZFAND2AQ8N6M9 145 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 ZNF680Q8NEM1 530 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 OR5C1Q8NGR4 320 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 OR2T35Q8NGX2 323 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 FAM167A-AS1Q96KT0 104 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 SCRT2Q9NQ03 307 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 TP53TG3Q9ULZ0 132 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 PRELID1Q9Y255 219 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 VPS13BQ7Z7G8 4022 aa5.88□□□□□ -1.47
CAPN3-213ENST00000565173 hCG_2014768A0A024R1R8 64 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 TRGV2A0A075B6R0 118 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 IGKV2-40A0A087WW87 121 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-213ENST00000565173 FXYD6-FXYD2A0A087WZ82 144 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 TRGV1A0A0A0MS02 117 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 IGKV2D-40P01614 121 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-213ENST00000565173 NMBP08949 121 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 FGF7P21781 194 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 RNASE4P34096 147 aaKnown RBP5.87□□□□□ -1.47
CAPN3-213ENST00000565173 TCL1AP56279 114 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 LINC00315P59091 139 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 IBA57Q5T440 356 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms