RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 CSN1S1P47710 185 aa13.03□□□□□ -0.32
SYNGR3-204ENST00000564642 Q5BKY6 102 aa13.03□□□□□ -0.32
SYNGR3-204ENST00000564642 TMEM78Q5T7P6 136 aa13.03□□□□□ -0.32
SYNGR3-204ENST00000564642 C9orf47Q6ZRZ4 202 aa13.03□□□□□ -0.32
SYNGR3-204ENST00000564642 LYPD1Q8N2G4 141 aa13.03□□□□□ -0.32
SYNGR3-204ENST00000564642 INO80EQ8NBZ0 244 aaPredicted RBP13.03□□□□□ -0.32
SYNGR3-204ENST00000564642 TMEM263Q8WUH6 116 aaKnown RBP13.03□□□□□ -0.32
SYNGR3-204ENST00000564642 ZNF503Q96F45 646 aa13.03□□□□□ -0.32
SYNGR3-204ENST00000564642 PHYHIPLQ96FC7 376 aa13.03□□□□□ -0.32
SYNGR3-204ENST00000564642 IGKV2-40A0A087WW87 121 aaPredicted RBP13.02□□□□□ -0.33
SYNGR3-204ENST00000564642 IGKV2D-40P01614 121 aaPredicted RBP13.02□□□□□ -0.33
SYNGR3-204ENST00000564642 HSD17B11Q8NBQ5 300 aa13.02□□□□□ -0.33
SYNGR3-204ENST00000564642 OR10G4Q8NGN3 311 aa13.02□□□□□ -0.33
SYNGR3-204ENST00000564642 OR10G9Q8NGN4 311 aa13.02□□□□□ -0.33
SYNGR3-204ENST00000564642 OR10G7Q8NGN6 311 aa13.02□□□□□ -0.33
SYNGR3-204ENST00000564642 Q9H3A6 140 aa13.02□□□□□ -0.33
SYNGR3-204ENST00000564642 C7orf71A4D174 169 aa13.01□□□□□ -0.33
SYNGR3-204ENST00000564642 RNASE8Q8TDE3 154 aaKnown RBP13.01□□□□□ -0.33
SYNGR3-204ENST00000564642 VGLL1Q99990 258 aa13.01□□□□□ -0.33
SYNGR3-204ENST00000564642 PYGO2Q9BRQ0 406 aa13.01□□□□□ -0.33
SYNGR3-204ENST00000564642 FXYD6-FXYD2A0A087WZ82 144 aa13□□□□□ -0.33
SYNGR3-204ENST00000564642 EIF3GO75821 320 aaKnown RBP eCLIP13□□□□□ -0.33
SYNGR3-204ENST00000564642 GPX1P07203 203 aa13□□□□□ -0.33
SYNGR3-204ENST00000564642 P0DMU3 169 aa13□□□□□ -0.33
SYNGR3-204ENST00000564642 FAM231AP0DMU4 169 aa13□□□□□ -0.33
SYNGR3-204ENST00000564642 FAM231CP0DMU5 169 aa13□□□□□ -0.33
SYNGR3-204ENST00000564642 RAB2AP61019 212 aa13□□□□□ -0.33
SYNGR3-204ENST00000564642 PQLC2Q6ZP29 291 aa13□□□□□ -0.33
SYNGR3-204ENST00000564642 OR2T35Q8NGX2 323 aa13□□□□□ -0.33
SYNGR3-204ENST00000564642 FAM19A4Q96LR4 140 aa13□□□□□ -0.33
SYNGR3-204ENST00000564642 NOP10Q9NPE3 64 aaKnown RBP13□□□□□ -0.33
SYNGR3-204ENST00000564642 ZNF492Q9P255 531 aa13□□□□□ -0.33
SYNGR3-204ENST00000564642 KLLNB2CW77 178 aa12.99□□□□□ -0.33
SYNGR3-204ENST00000564642 RNASE4P34096 147 aaKnown RBP12.99□□□□□ -0.33
SYNGR3-204ENST00000564642 FAM74A1Q5RGS3 127 aa12.99□□□□□ -0.33
SYNGR3-204ENST00000564642 RXFP4Q8TDU9 374 aa12.99□□□□□ -0.33
SYNGR3-204ENST00000564642 PSMG3Q9BT73 122 aaPredicted RBP12.99□□□□□ -0.33
SYNGR3-204ENST00000564642 CBY3A6NI87 242 aa12.98□□□□□ -0.33
SYNGR3-204ENST00000564642 SNURFLB1AK76 121 aa12.98□□□□□ -0.33
SYNGR3-204ENST00000564642 MBP02144 154 aa12.98□□□□□ -0.33
SYNGR3-204ENST00000564642 NMBP08949 121 aa12.98□□□□□ -0.33
SYNGR3-204ENST00000564642 CRISP2P16562 243 aa12.98□□□□□ -0.33
SYNGR3-204ENST00000564642 ATP6V0CP27449 155 aa12.98□□□□□ -0.33
SYNGR3-204ENST00000564642 ZNF138P52744 262 aa12.98□□□□□ -0.33
SYNGR3-204ENST00000564642 SERF2P84101 59 aa12.98□□□□□ -0.33
SYNGR3-204ENST00000564642 CD300CQ08708 224 aa12.98□□□□□ -0.33
SYNGR3-204ENST00000564642 BTN1A1Q13410 526 aa12.98□□□□□ -0.33
SYNGR3-204ENST00000564642 OR2G3Q8NGZ4 309 aa12.98□□□□□ -0.33
SYNGR3-204ENST00000564642 BORCS7-ASMTA0A0B4J1R7 106 aa12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 RBAKDNA6NC62 111 aa12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 PGPA6NDG6 321 aa12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 HMGB3O15347 200 aaKnown RBP12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 ZNF324O75467 553 aaPredicted RBP12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 ATP5G1P05496 136 aa12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 ATP5G3P48201 142 aa12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 CDC34P49427 236 aaPredicted RBP12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 TMEM88Q6PEY1 159 aa12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 CMTM2Q8TAZ6 248 aa12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 HYLS1Q96M11 299 aa12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 OTORQ9NRC9 128 aa12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 TNFSF18Q9UNG2 199 aa12.97□□□□□ -0.33
SYNGR3-204ENST00000564642 RNF222A6NCQ9 220 aa12.96□□□□□ -0.33
SYNGR3-204ENST00000564642 DIRC3C9JPN6 131 aa12.96□□□□□ -0.33
SYNGR3-204ENST00000564642 F5H768 121 aa12.96□□□□□ -0.33
SYNGR3-204ENST00000564642 POM121L12Q8N7R1 296 aa12.96□□□□□ -0.33
SYNGR3-204ENST00000564642 TRBV7-9A0A0J9YWB2 115 aa12.95□□□□□ -0.34
SYNGR3-204ENST00000564642 RPL7L1Q6DKI1 246 aaKnown RBP12.95□□□□□ -0.34
SYNGR3-204ENST00000564642 ZFAND2AQ8N6M9 145 aa12.95□□□□□ -0.34
SYNGR3-204ENST00000564642 C15orf53Q8NAA6 179 aa12.95□□□□□ -0.34
SYNGR3-204ENST00000564642 ZNF680Q8NEM1 530 aa12.95□□□□□ -0.34
SYNGR3-204ENST00000564642 Q8TAT8 98 aa12.95□□□□□ -0.34
SYNGR3-204ENST00000564642 RAB24Q969Q5 203 aa12.95□□□□□ -0.34
SYNGR3-204ENST00000564642 GNPNAT1Q96EK6 184 aaPredicted RBP12.95□□□□□ -0.34
SYNGR3-204ENST00000564642 RPH3ALQ9UNE2 315 aa12.95□□□□□ -0.34
SYNGR3-204ENST00000564642 RGS13O14921 159 aa12.94□□□□□ -0.34
SYNGR3-204ENST00000564642 STAG3L2P0CL84 134 aa12.94□□□□□ -0.34
SYNGR3-204ENST00000564642 STAG3L3P0CL85 134 aa12.94□□□□□ -0.34
SYNGR3-204ENST00000564642 ARL14EPLP0DKL9 152 aa12.94□□□□□ -0.34
SYNGR3-204ENST00000564642 UBE2DNLQ8IWF7 75 aa12.94□□□□□ -0.34
SYNGR3-204ENST00000564642 EIF4E3Q8N5X7 224 aaKnown RBP12.94□□□□□ -0.34
SYNGR3-204ENST00000564642 LINC00467Q9BRT7 94 aa12.94□□□□□ -0.34
SYNGR3-204ENST00000564642 SH3BGRL3Q9H299 93 aa12.94□□□□□ -0.34
SYNGR3-204ENST00000564642 GAGE12BA1L429 117 aa12.93□□□□□ -0.34
SYNGR3-204ENST00000564642 GAGE7O76087 117 aa12.93□□□□□ -0.34
SYNGR3-204ENST00000564642 GAGE12FP0CL80 117 aa12.93□□□□□ -0.34
SYNGR3-204ENST00000564642 GAGE12GP0CL81 117 aa12.93□□□□□ -0.34
SYNGR3-204ENST00000564642 GAGE12IP0CL82 117 aa12.93□□□□□ -0.34
SYNGR3-204ENST00000564642 ANXA2RQ3ZCQ2 193 aa12.93□□□□□ -0.34
SYNGR3-204ENST00000564642 PRR9Q5T870 116 aa12.93□□□□□ -0.34
SYNGR3-204ENST00000564642 ACTR3CQ9C0K3 210 aaPredicted RBP12.93□□□□□ -0.34
SYNGR3-204ENST00000564642 DAZ2Q13117 558 aaKnown RBP12.92□□□□□ -0.34
SYNGR3-204ENST00000564642 ARL6IP6Q8N6S5 226 aa12.92□□□□□ -0.34
SYNGR3-204ENST00000564642 GSN-AS1Q9NRJ2 163 aa12.92□□□□□ -0.34
SYNGR3-204ENST00000564642 LENEPQ9Y5L5 61 aa12.92□□□□□ -0.34
SYNGR3-204ENST00000564642 G3V3Q6 166 aa12.91□□□□□ -0.34
SYNGR3-204ENST00000564642 TAAR5O14804 337 aa12.91□□□□□ -0.34
SYNGR3-204ENST00000564642 ARPC5O15511 151 aa12.91□□□□□ -0.34
SYNGR3-204ENST00000564642 CXorf1O96002 111 aa12.91□□□□□ -0.34
SYNGR3-204ENST00000564642 GCHFRP30047 84 aa12.91□□□□□ -0.34
SYNGR3-204ENST00000564642 LINC00612Q8N6U2 182 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms