RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 TMEM78Q5T7P6 136 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 AMTNQ6UX39 209 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 Q6ZR03 302 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 C18orf65Q6ZTR6 163 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 NEXN-AS1Q8NBZ9 246 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 FGFBP3Q8TAT2 258 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 ITLN1Q8WWA0 313 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 FLYWCH2Q96CP2 140 aaKnown RBP4.34□□□□□ -1.71
CHD9-210ENST00000564582 RNF5Q99942 180 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 C20orf78Q9BR46 151 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 TPPP3Q9BW30 176 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 HINT2Q9BX68 163 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 CALYQ9NYX4 217 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 MDFICQ9P1T7 246 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 SS18L2Q9UHA2 77 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 FZR1Q9UM11 496 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 SIGLEC9Q9Y336 463 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 MED12LQ86YW9 2145 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 USF3Q68DE3 2245 aa4.34□□□□□ -1.72
CHD9-210ENST00000564582 TRBV7-3A0A075B6L6 115 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 IGKV1OR2-108A0A075B7D4 117 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 A0A096LNJ9 63 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 SRRM5B3KS81 715 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 USP17L23D6RBM5 183 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 J3KT08 172 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 CNIH1O95406 144 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 FSTL3O95633 263 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 MT-ATP8P03928 68 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 ARMS2P0C7Q2 107 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 GP9P14770 177 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 EDN2P20800 178 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 LEPP41159 167 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 ATXN8Q156A1 80 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 MRPL51Q4U2R6 128 aaKnown RBP4.33□□□□□ -1.72
CHD9-210ENST00000564582 TMEM170BQ5T4T1 132 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 C16orf47Q6ZP98 133 aaPredicted RBP4.33□□□□□ -1.72
CHD9-210ENST00000564582 SMIM20Q8N5G0 67 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 LINC00311Q8N616 119 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 UBALD1Q8TB05 177 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 TMEM101Q96IK0 257 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 ASCL2Q99929 193 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 MRPL20Q9BYC9 149 aaKnown RBP4.33□□□□□ -1.72
CHD9-210ENST00000564582 PROK2Q9HC23 129 aa4.33□□□□□ -1.72
CHD9-210ENST00000564582 F11RQ9Y624 299 aaKnown RBP4.33□□□□□ -1.72
CHD9-210ENST00000564582 TRAV8-2A0A0B4J237 113 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 TRAV8-4A0A0B4J246 113 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 IGHV1-69DA0A0B4J2H0 117 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 LOC107984156A0A0G2JMH3 177 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 SPAARA0A1B0GVQ0 90 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 H3BT86 120 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 UQCRQO14949 82 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 NCR2O95944 276 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 CGB3P0DN86 165 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 CGB7P0DN87 165 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 PYYP10082 97 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 COX6A1P12074 109 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 PSMB2P49721 201 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 RPL36AP83881 106 aaKnown RBP4.32□□□□□ -1.72
CHD9-210ENST00000564582 GTF3C1Q12789 2109 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 DEFB133Q30KQ1 61 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 MEIG1Q5JSS6 88 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 PATE2Q6UY27 113 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 SCGB1D4Q6XE38 83 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 PRNTQ86SH4 94 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 ARL17AQ8IVW1 177 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 C10orf126Q8N4M7 172 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 C15orf53Q8NAA6 179 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 MRAPQ8TCY5 172 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 COPS9Q8WXC6 57 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 DEFB118Q96PH6 123 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 PLA2G2FQ9BZM2 168 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 PRO1854Q9UHT4 67 aa4.32□□□□□ -1.72
CHD9-210ENST00000564582 TIMM8BQ9Y5J9 83 aaPredicted RBP4.32□□□□□ -1.72
CHD9-210ENST00000564582 PDE4DIPQ5VU43 2346 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 TRBV19A0A075B6N1 114 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 TRAV2A0A0B4J234 112 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 TRAV3A0A0B4J244 114 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 TRBV7-7A0A0K0K1E9 115 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 WI2-2373I1.2A0A1W2PRP0 233 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 RBAKDNA6NC62 111 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 SLC25A20O43772 301 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 TIMM8AO60220 97 aaPredicted RBP4.31□□□□□ -1.72
CHD9-210ENST00000564582 DUSP14O95147 198 aaKnown RBP4.31□□□□□ -1.72
CHD9-210ENST00000564582 SAA2P0DJI9 122 aaPredicted RBP4.31□□□□□ -1.72
CHD9-210ENST00000564582 ORM2P19652 201 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 CXCL5P42830 114 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 ZNF138P52744 262 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 C3AR1Q16581 482 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 LYZL1Q6UWQ5 148 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 ZNF833PQ6ZTB9 187 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 GOLT1AQ6ZVE7 132 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 ASCL5Q7RTU5 278 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 TMEM219Q86XT9 240 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 ANKRD29Q8N6D5 301 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 RFESDQ8TAC1 157 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 KLF14Q8TD94 323 aaPredicted RBP4.31□□□□□ -1.72
CHD9-210ENST00000564582 SGK494Q96LW2 274 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 FOXC2Q99958 501 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 NGBQ9NPG2 151 aa4.31□□□□□ -1.72
CHD9-210ENST00000564582 RPUSD1Q9UJJ7 312 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms