RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 ZNF492Q9P255 531 aa12.4□□□□□ -0.42
USB1-209ENST00000564387 CTXND1A0A1B0GTU2 59 aa12.39□□□□□ -0.43
USB1-209ENST00000564387 CXorf65A6NEN9 183 aa12.39□□□□□ -0.43
USB1-209ENST00000564387 DIRC3C9JPN6 131 aa12.39□□□□□ -0.43
USB1-209ENST00000564387 CXorf1O96002 111 aa12.39□□□□□ -0.43
USB1-209ENST00000564387 SEC11BP0C7V7 166 aa12.39□□□□□ -0.43
USB1-209ENST00000564387 CSN1S1P47710 185 aa12.39□□□□□ -0.43
USB1-209ENST00000564387 TAS2R60P59551 318 aa12.39□□□□□ -0.43
USB1-209ENST00000564387 PHLDA1Q8WV24 401 aaPredicted RBP12.39□□□□□ -0.43
USB1-209ENST00000564387 TMEM208Q9BTX3 173 aa12.39□□□□□ -0.43
USB1-209ENST00000564387 CELA1Q9UNI1 258 aa12.39□□□□□ -0.43
USB1-209ENST00000564387 LOC102723971A0A1B0GUV8 181 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 PLAC8L1A1L4L8 177 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 PGPA6NDG6 321 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 H7BYZ3 331 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 C1QBP02746 253 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 PMS2P11Q13670 270 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 C12orf74Q32Q52 190 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 TMUB2Q71RG4 321 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 ZFAND2AQ8N6M9 145 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 TMEM167BQ9NRX6 74 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 PLA2G2EQ9NZK7 142 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 DKK2Q9UBU2 259 aa12.38□□□□□ -0.43
USB1-209ENST00000564387 KANTRA0A1W2PQU2 76 aa12.37□□□□□ -0.43
USB1-209ENST00000564387 ZNF705GA8MUZ8 300 aaPredicted RBP12.37□□□□□ -0.43
USB1-209ENST00000564387 ZNF324O75467 553 aaPredicted RBP12.37□□□□□ -0.43
USB1-209ENST00000564387 PRM2P04554 102 aa12.37□□□□□ -0.43
USB1-209ENST00000564387 ZNF138P52744 262 aa12.37□□□□□ -0.43
USB1-209ENST00000564387 LGALSLQ3ZCW2 172 aaPredicted RBP12.37□□□□□ -0.43
USB1-209ENST00000564387 FAM74A1Q5RGS3 127 aa12.37□□□□□ -0.43
USB1-209ENST00000564387 AKR1C8PQ5T2L2 129 aa12.37□□□□□ -0.43
USB1-209ENST00000564387 TMEM78Q5T7P6 136 aa12.37□□□□□ -0.43
USB1-209ENST00000564387 TMED6Q8WW62 240 aa12.37□□□□□ -0.43
USB1-209ENST00000564387 LINC01587Q99440 93 aa12.37□□□□□ -0.43
USB1-209ENST00000564387 LENEPQ9Y5L5 61 aa12.37□□□□□ -0.43
USB1-209ENST00000564387 PLECQ15149 4684 aaKnown RBP12.37□□□□□ -0.43
USB1-209ENST00000564387 TEX48A0A1B0GUV7 120 aa12.36□□□□□ -0.43
USB1-209ENST00000564387 C11orf94C9JXX5 98 aa12.36□□□□□ -0.43
USB1-209ENST00000564387 SPART-AS1P0CW21 52 aa12.36□□□□□ -0.43
USB1-209ENST00000564387 AZU1P20160 251 aa12.36□□□□□ -0.43
USB1-209ENST00000564387 STOML3Q8TAV4 291 aa12.36□□□□□ -0.43
USB1-209ENST00000564387 YTHDF2Q9Y5A9 579 aaKnown RBP12.36□□□□□ -0.43
USB1-209ENST00000564387 A0A1W2PRE2 83 aa12.35□□□□□ -0.43
USB1-209ENST00000564387 C7orf71A4D174 169 aa12.35□□□□□ -0.43
USB1-209ENST00000564387 UMAD1C9J7I0 102 aa12.35□□□□□ -0.43
USB1-209ENST00000564387 EIF5AP63241 154 aaKnown RBP12.35□□□□□ -0.43
USB1-209ENST00000564387 ZNF493Q6ZR52 646 aa12.35□□□□□ -0.43
USB1-209ENST00000564387 Q6ZTC4 211 aa12.35□□□□□ -0.43
USB1-209ENST00000564387 RNASE8Q8TDE3 154 aaKnown RBP12.35□□□□□ -0.43
USB1-209ENST00000564387 HYLS1Q96M11 299 aa12.35□□□□□ -0.43
USB1-209ENST00000564387 LINC00467Q9BRT7 94 aa12.35□□□□□ -0.43
USB1-209ENST00000564387 ZNF471Q9BX82 626 aaPredicted RBP12.35□□□□□ -0.43
USB1-209ENST00000564387 LYSTQ99698 3801 aa12.34□□□□□ -0.43
USB1-209ENST00000564387 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
USB1-209ENST00000564387 LCE6AA0A183 80 aa12.34□□□□□ -0.43
USB1-209ENST00000564387 CD300CQ08708 224 aa12.34□□□□□ -0.43
USB1-209ENST00000564387 FAM222AQ5U5X8 452 aa12.34□□□□□ -0.43
USB1-209ENST00000564387 AKAP14Q86UN6 197 aa12.34□□□□□ -0.43
USB1-209ENST00000564387 CMTM2Q8TAZ6 248 aa12.34□□□□□ -0.43
USB1-209ENST00000564387 PYGO2Q9BRQ0 406 aa12.34□□□□□ -0.43
USB1-209ENST00000564387 KLK5Q9Y337 293 aaPredicted RBP12.34□□□□□ -0.43
USB1-209ENST00000564387 SACSQ9NZJ4 4579 aa12.34□□□□□ -0.43
USB1-209ENST00000564387 SERTM2A0A1B0GWG4 89 aa12.33□□□□□ -0.44
USB1-209ENST00000564387 GGTLC3B5MD39 225 aa12.33□□□□□ -0.44
USB1-209ENST00000564387 EMP1P54849 157 aa12.33□□□□□ -0.44
USB1-209ENST00000564387 PRR9Q5T870 116 aa12.33□□□□□ -0.44
USB1-209ENST00000564387 C5orf17Q8NAS9 161 aa12.33□□□□□ -0.44
USB1-209ENST00000564387 TMEM263Q8WUH6 116 aaKnown RBP12.33□□□□□ -0.44
USB1-209ENST00000564387 C16orf74Q96GX8 76 aa12.33□□□□□ -0.44
USB1-209ENST00000564387 RYR3Q15413 4870 aa12.33□□□□□ -0.44
USB1-209ENST00000564387 hCG_2014768A0A024R1R8 64 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 TRAV10A0A0B4J240 114 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 MAP1LC3B2A6NCE7 125 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 LYRM9A8MSI8 78 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 PFDN1O60925 122 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 GPX1P07203 203 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 TPT1P13693 172 aaKnown RBP12.32□□□□□ -0.44
USB1-209ENST00000564387 FHITP49789 147 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 BTN1A1Q13410 526 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 DPPA3Q6W0C5 159 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 Q8TAT8 98 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 MBD3L1Q8WWY6 194 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 NIPSNAP3BQ9BS92 247 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 MAP1LC3BQ9GZQ8 125 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 TMPRSS5Q9H3S3 457 aa12.32□□□□□ -0.44
USB1-209ENST00000564387 J3KRW8 73 aa12.31□□□□□ -0.44
USB1-209ENST00000564387 TCRAP04437 139 aa12.31□□□□□ -0.44
USB1-209ENST00000564387 RNASE4P34096 147 aaKnown RBP12.31□□□□□ -0.44
USB1-209ENST00000564387 SUMO1P63165 101 aaKnown RBP12.31□□□□□ -0.44
USB1-209ENST00000564387 GOLT1AQ6ZVE7 132 aa12.31□□□□□ -0.44
USB1-209ENST00000564387 EPDR1Q9UM22 224 aa12.31□□□□□ -0.44
USB1-209ENST00000564387 A0A1B0GVG6 124 aa12.3□□□□□ -0.44
USB1-209ENST00000564387 FGF8P55075 233 aaPredicted RBP12.3□□□□□ -0.44
USB1-209ENST00000564387 TCTAP57738 103 aa12.3□□□□□ -0.44
USB1-209ENST00000564387 GNG5P63218 68 aa12.3□□□□□ -0.44
USB1-209ENST00000564387 ANXA2RQ3ZCQ2 193 aa12.3□□□□□ -0.44
USB1-209ENST00000564387 Q6AWC8 147 aa12.3□□□□□ -0.44
USB1-209ENST00000564387 ZNF767PQ75MW2 155 aa12.3□□□□□ -0.44
USB1-209ENST00000564387 C2CD4CQ8TF44 421 aa12.3□□□□□ -0.44
USB1-209ENST00000564387 TVP23CQ96ET8 276 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms