RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 FAM19A4Q96LR4 140 aa16.52■□□□□ 0.24
NME3-206ENST00000564252 Q9H3A6 140 aa16.52■□□□□ 0.24
NME3-206ENST00000564252 PRELID1Q9Y255 219 aa16.52■□□□□ 0.24
NME3-206ENST00000564252 KLLNB2CW77 178 aa16.51■□□□□ 0.23
NME3-206ENST00000564252 ZNF324O75467 553 aaPredicted RBP16.51■□□□□ 0.23
NME3-206ENST00000564252 PYYP10082 97 aa16.51■□□□□ 0.23
NME3-206ENST00000564252 PDE6HQ13956 83 aa16.51■□□□□ 0.23
NME3-206ENST00000564252 ATP6V1FQ16864 119 aa16.51■□□□□ 0.23
NME3-206ENST00000564252 GSN-AS1Q9NRJ2 163 aa16.51■□□□□ 0.23
NME3-206ENST00000564252 CD300CQ08708 224 aa16.5■□□□□ 0.23
NME3-206ENST00000564252 BTN1A1Q13410 526 aa16.5■□□□□ 0.23
NME3-206ENST00000564252 GCSAMLQ5JQS6 135 aa16.5■□□□□ 0.23
NME3-206ENST00000564252 ZNF680Q8NEM1 530 aa16.5■□□□□ 0.23
NME3-206ENST00000564252 LINC00477Q96M19 166 aa16.5■□□□□ 0.23
NME3-206ENST00000564252 C18orf15Q96N68 181 aa16.5■□□□□ 0.23
NME3-206ENST00000564252 LINC00467Q9BRT7 94 aa16.5■□□□□ 0.23
NME3-206ENST00000564252 CCDC32Q9BV29 185 aa16.5■□□□□ 0.23
NME3-206ENST00000564252 AGPAT4-IT1Q9H0P7 198 aa16.5■□□□□ 0.23
NME3-206ENST00000564252 GPN1Q9HCN4 374 aaPredicted RBP16.5■□□□□ 0.23
NME3-206ENST00000564252 MRPS16Q9Y3D3 137 aaKnown RBP16.5■□□□□ 0.23
NME3-206ENST00000564252 TIMM9Q9Y5J7 89 aa16.5■□□□□ 0.23
NME3-206ENST00000564252 EXOC3-AS1Q8N2X6 119 aa16.49■□□□□ 0.23
NME3-206ENST00000564252 VSIG2Q96IQ7 327 aa16.49■□□□□ 0.23
NME3-206ENST00000564252 NPCDR1Q9BY65 106 aa16.49■□□□□ 0.23
NME3-206ENST00000564252 MPDU1O75352 247 aa16.48■□□□□ 0.23
NME3-206ENST00000564252 ANXA2RQ3ZCQ2 193 aa16.48■□□□□ 0.23
NME3-206ENST00000564252 EIF4E3Q8N5X7 224 aaKnown RBP16.48■□□□□ 0.23
NME3-206ENST00000564252 BLNKQ8WV28 456 aa16.48■□□□□ 0.23
NME3-206ENST00000564252 NDUFA13Q9P0J0 144 aa16.48■□□□□ 0.23
NME3-206ENST00000564252 FAM240BA0A1B0GVZ2 78 aa16.47■□□□□ 0.23
NME3-206ENST00000564252 A0A1W2PPQ1 181 aa16.47■□□□□ 0.23
NME3-206ENST00000564252 CRISP2P16562 243 aa16.47■□□□□ 0.23
NME3-206ENST00000564252 C9orf47Q6ZRZ4 202 aa16.47■□□□□ 0.23
NME3-206ENST00000564252 SLC25A2Q9BXI2 301 aa16.47■□□□□ 0.23
NME3-206ENST00000564252 TRGV2A0A075B6R0 118 aa16.46■□□□□ 0.23
NME3-206ENST00000564252 A0A096LPF7 62 aa16.46■□□□□ 0.23
NME3-206ENST00000564252 RNASE4P34096 147 aaKnown RBP16.46■□□□□ 0.23
NME3-206ENST00000564252 NHLH2Q02577 135 aa16.46■□□□□ 0.23
NME3-206ENST00000564252 SPATA12Q7Z6I5 190 aa16.46■□□□□ 0.23
NME3-206ENST00000564252 FAM167A-AS1Q96KT0 104 aa16.46■□□□□ 0.23
NME3-206ENST00000564252 AAMDCQ9H7C9 122 aa16.46■□□□□ 0.23
NME3-206ENST00000564252 IGKV2-40A0A087WW87 121 aaPredicted RBP16.45■□□□□ 0.22
NME3-206ENST00000564252 TRGV1A0A0A0MS02 117 aa16.45■□□□□ 0.22
NME3-206ENST00000564252 IGKV2D-40P01614 121 aaPredicted RBP16.45■□□□□ 0.22
NME3-206ENST00000564252 ICAM4Q14773 271 aa16.45■□□□□ 0.22
NME3-206ENST00000564252 FUT9Q9Y231 359 aa16.45■□□□□ 0.22
NME3-206ENST00000564252 KLF12Q9Y4X4 402 aa16.45■□□□□ 0.22
NME3-206ENST00000564252 SPINK4O60575 86 aa16.44■□□□□ 0.22
NME3-206ENST00000564252 GPX1P07203 203 aa16.44■□□□□ 0.22
NME3-206ENST00000564252 TCL1AP56279 114 aa16.44■□□□□ 0.22
NME3-206ENST00000564252 PRR9Q5T870 116 aa16.44■□□□□ 0.22
NME3-206ENST00000564252 MIR17HGQ75NE6 70 aa16.44■□□□□ 0.22
NME3-206ENST00000564252 ZFAND2AQ8N6M9 145 aa16.44■□□□□ 0.22
NME3-206ENST00000564252 OR5C1Q8NGR4 320 aa16.44■□□□□ 0.22
NME3-206ENST00000564252 THAP6Q8TBB0 222 aa16.44■□□□□ 0.22
NME3-206ENST00000564252 VGLL1Q99990 258 aa16.44■□□□□ 0.22
NME3-206ENST00000564252 NMBP08949 121 aa16.43■□□□□ 0.22
NME3-206ENST00000564252 FAM122CQ6P4D5 195 aa16.43■□□□□ 0.22
NME3-206ENST00000564252 MAPKAPK5-AS1Q8N8E1 139 aa16.43■□□□□ 0.22
NME3-206ENST00000564252 BTF3P20290 206 aaKnown RBP16.42■□□□□ 0.22
NME3-206ENST00000564252 IBA57Q5T440 356 aaKnown RBP16.42■□□□□ 0.22
NME3-206ENST00000564252 TMEM78Q5T7P6 136 aa16.42■□□□□ 0.22
NME3-206ENST00000564252 MZT2BQ6NZ67 158 aa16.42■□□□□ 0.22
NME3-206ENST00000564252 Q6ZQT7 251 aa16.42■□□□□ 0.22
NME3-206ENST00000564252 TP53TG3Q9ULZ0 132 aa16.42■□□□□ 0.22
NME3-206ENST00000564252 SIX6O95475 246 aa16.41■□□□□ 0.22
NME3-206ENST00000564252 NBEAP1P0C6P0 100 aa16.41■□□□□ 0.22
NME3-206ENST00000564252 KRTAP10-2P60368 255 aa16.41■□□□□ 0.22
NME3-206ENST00000564252 ASAH1Q13510 395 aa16.41■□□□□ 0.22
NME3-206ENST00000564252 OR51M1Q9H341 326 aa16.41■□□□□ 0.22
NME3-206ENST00000564252 ZNF492Q9P255 531 aa16.41■□□□□ 0.22
NME3-206ENST00000564252 ST6GAL2Q96JF0 529 aa16.4■□□□□ 0.22
NME3-206ENST00000564252 SLC25A31Q9H0C2 315 aa16.4■□□□□ 0.22
NME3-206ENST00000564252 OR5AC2Q9NZP5 309 aa16.4■□□□□ 0.22
NME3-206ENST00000564252 IGHV1OR15-1A0A075B7D0 117 aa16.39■□□□□ 0.21
NME3-206ENST00000564252 E5RGE8 158 aa16.39■□□□□ 0.21
NME3-206ENST00000564252 RGS13O14921 159 aa16.39■□□□□ 0.21
NME3-206ENST00000564252 FXYD5Q96DB9 178 aa16.39■□□□□ 0.21
NME3-206ENST00000564252 NMES1Q9C002 83 aa16.39■□□□□ 0.21
NME3-206ENST00000564252 H0YIZ8 118 aa16.38■□□□□ 0.21
NME3-206ENST00000564252 OR10J4P0C629 311 aa16.38■□□□□ 0.21
NME3-206ENST00000564252 LINC00315P59091 139 aa16.38■□□□□ 0.21
NME3-206ENST00000564252 LINC00299Q6ZSB3 139 aa16.38■□□□□ 0.21
NME3-206ENST00000564252 PHYHIPLQ96FC7 376 aa16.38■□□□□ 0.21
NME3-206ENST00000564252 PAXXQ9BUH6 204 aa16.38■□□□□ 0.21
NME3-206ENST00000564252 MRPL32Q9BYC8 188 aaKnown RBP16.38■□□□□ 0.21
NME3-206ENST00000564252 WDR61Q9GZS3 305 aaKnown RBP16.38■□□□□ 0.21
NME3-206ENST00000564252 MRPL16Q9NX20 251 aaKnown RBP16.38■□□□□ 0.21
NME3-206ENST00000564252 PAX4O43316 350 aa16.37■□□□□ 0.21
NME3-206ENST00000564252 ZNF138P52744 262 aa16.37■□□□□ 0.21
NME3-206ENST00000564252 LRRC37A5PQ49AS3 106 aa16.37■□□□□ 0.21
NME3-206ENST00000564252 Q6ZRN7 208 aaPredicted RBP16.37■□□□□ 0.21
NME3-206ENST00000564252 Q8TAT8 98 aa16.37■□□□□ 0.21
NME3-206ENST00000564252 ICOSQ9Y6W8 199 aa16.37■□□□□ 0.21
NME3-206ENST00000564252 TRBV7-9A0A0J9YWB2 115 aa16.36■□□□□ 0.21
NME3-206ENST00000564252 SIVA1O15304 175 aa16.36■□□□□ 0.21
NME3-206ENST00000564252 IGHV3-53P01767 116 aa16.36■□□□□ 0.21
NME3-206ENST00000564252 KCNIP2Q9NS61 270 aa16.36■□□□□ 0.21
NME3-206ENST00000564252 Q8N1X5 172 aa16.35■□□□□ 0.21
NME3-206ENST00000564252 ENKURQ8TC29 256 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms