RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 TMEM78Q5T7P6 136 aa21.78■■□□□ 1.08
CMTM4-204ENST00000563952 C9orf47Q6ZRZ4 202 aa21.78■■□□□ 1.08
CMTM4-204ENST00000563952 HSD17B11Q8NBQ5 300 aa21.78■■□□□ 1.08
CMTM4-204ENST00000563952 VGLL1Q99990 258 aa21.78■■□□□ 1.08
CMTM4-204ENST00000563952 TIMM8BQ9Y5J9 83 aaPredicted RBP21.78■■□□□ 1.08
CMTM4-204ENST00000563952 A0A1W2PPV4 95 aa21.77■■□□□ 1.08
CMTM4-204ENST00000563952 SLC25A5P05141 298 aaKnown RBP21.77■■□□□ 1.08
CMTM4-204ENST00000563952 FAM210BQ96KR6 192 aa21.77■■□□□ 1.08
CMTM4-204ENST00000563952 Q9H3A6 140 aa21.77■■□□□ 1.08
CMTM4-204ENST00000563952 NOP10Q9NPE3 64 aaKnown RBP21.77■■□□□ 1.08
CMTM4-204ENST00000563952 C7orf71A4D174 169 aa21.76■■□□□ 1.07
CMTM4-204ENST00000563952 CSN1S1P47710 185 aa21.76■■□□□ 1.07
CMTM4-204ENST00000563952 FAM19A4Q96LR4 140 aa21.76■■□□□ 1.07
CMTM4-204ENST00000563952 FXYD6-FXYD2A0A087WZ82 144 aa21.75■■□□□ 1.07
CMTM4-204ENST00000563952 LYPD1Q8N2G4 141 aa21.75■■□□□ 1.07
CMTM4-204ENST00000563952 INO80EQ8NBZ0 244 aaPredicted RBP21.75■■□□□ 1.07
CMTM4-204ENST00000563952 OR10G4Q8NGN3 311 aa21.75■■□□□ 1.07
CMTM4-204ENST00000563952 OR10G9Q8NGN4 311 aa21.75■■□□□ 1.07
CMTM4-204ENST00000563952 OR10G7Q8NGN6 311 aa21.75■■□□□ 1.07
CMTM4-204ENST00000563952 KLLNB2CW77 178 aa21.74■■□□□ 1.07
CMTM4-204ENST00000563952 RNASE4P34096 147 aaKnown RBP21.74■■□□□ 1.07
CMTM4-204ENST00000563952 CD300CQ08708 224 aa21.74■■□□□ 1.07
CMTM4-204ENST00000563952 BTN1A1Q13410 526 aa21.74■■□□□ 1.07
CMTM4-204ENST00000563952 TMEM88Q6PEY1 159 aa21.74■■□□□ 1.07
CMTM4-204ENST00000563952 OR2T35Q8NGX2 323 aa21.74■■□□□ 1.07
CMTM4-204ENST00000563952 KMT2AQ03164 3969 aa21.73■■□□□ 1.07
CMTM4-204ENST00000563952 HMGB3O15347 200 aaKnown RBP21.73■■□□□ 1.07
CMTM4-204ENST00000563952 GPX1P07203 203 aa21.73■■□□□ 1.07
CMTM4-204ENST00000563952 P0DMU3 169 aa21.73■■□□□ 1.07
CMTM4-204ENST00000563952 FAM231AP0DMU4 169 aa21.73■■□□□ 1.07
CMTM4-204ENST00000563952 FAM231CP0DMU5 169 aa21.73■■□□□ 1.07
CMTM4-204ENST00000563952 PYGO2Q9BRQ0 406 aa21.73■■□□□ 1.07
CMTM4-204ENST00000563952 ZNF492Q9P255 531 aa21.72■■□□□ 1.07
CMTM4-204ENST00000563952 CRISP2P16562 243 aa21.71■■□□□ 1.07
CMTM4-204ENST00000563952 ATP6V0CP27449 155 aa21.71■■□□□ 1.07
CMTM4-204ENST00000563952 PQLC2Q6ZP29 291 aa21.71■■□□□ 1.07
CMTM4-204ENST00000563952 Q8TAT8 98 aa21.71■■□□□ 1.07
CMTM4-204ENST00000563952 HYLS1Q96M11 299 aa21.71■■□□□ 1.07
CMTM4-204ENST00000563952 VPS13DQ5THJ4 4388 aa21.7■■□□□ 1.06
CMTM4-204ENST00000563952 CBY3A6NI87 242 aa21.7■■□□□ 1.06
CMTM4-204ENST00000563952 SNURFLB1AK76 121 aa21.7■■□□□ 1.06
CMTM4-204ENST00000563952 F5H768 121 aa21.7■■□□□ 1.06
CMTM4-204ENST00000563952 ATP5G1P05496 136 aa21.7■■□□□ 1.06
CMTM4-204ENST00000563952 ATP5G3P48201 142 aa21.7■■□□□ 1.06
CMTM4-204ENST00000563952 ZNF138P52744 262 aa21.7■■□□□ 1.06
CMTM4-204ENST00000563952 OR2G3Q8NGZ4 309 aa21.7■■□□□ 1.06
CMTM4-204ENST00000563952 PSMG3Q9BT73 122 aaPredicted RBP21.7■■□□□ 1.06
CMTM4-204ENST00000563952 RNF222A6NCQ9 220 aa21.69■■□□□ 1.06
CMTM4-204ENST00000563952 ZFAND2AQ8N6M9 145 aa21.69■■□□□ 1.06
CMTM4-204ENST00000563952 TNFSF18Q9UNG2 199 aa21.69■■□□□ 1.06
CMTM4-204ENST00000563952 ZNF324O75467 553 aaPredicted RBP21.68■■□□□ 1.06
CMTM4-204ENST00000563952 NMBP08949 121 aa21.68■■□□□ 1.06
CMTM4-204ENST00000563952 CDC34P49427 236 aaPredicted RBP21.68■■□□□ 1.06
CMTM4-204ENST00000563952 PRR9Q5T870 116 aa21.68■■□□□ 1.06
CMTM4-204ENST00000563952 POM121L12Q8N7R1 296 aa21.68■■□□□ 1.06
CMTM4-204ENST00000563952 RXFP4Q8TDU9 374 aa21.68■■□□□ 1.06
CMTM4-204ENST00000563952 SH3BGRL3Q9H299 93 aa21.68■■□□□ 1.06
CMTM4-204ENST00000563952 OTORQ9NRC9 128 aa21.68■■□□□ 1.06
CMTM4-204ENST00000563952 RPH3ALQ9UNE2 315 aa21.68■■□□□ 1.06
CMTM4-204ENST00000563952 RBAKDNA6NC62 111 aa21.67■■□□□ 1.06
CMTM4-204ENST00000563952 DIRC3C9JPN6 131 aa21.67■■□□□ 1.06
CMTM4-204ENST00000563952 PGPA6NDG6 321 aa21.66■■□□□ 1.06
CMTM4-204ENST00000563952 RPL7L1Q6DKI1 246 aaKnown RBP21.66■■□□□ 1.06
CMTM4-204ENST00000563952 UBE2DNLQ8IWF7 75 aa21.66■■□□□ 1.06
CMTM4-204ENST00000563952 CMTM2Q8TAZ6 248 aa21.66■■□□□ 1.06
CMTM4-204ENST00000563952 BORCS7-ASMTA0A0B4J1R7 106 aa21.65■■□□□ 1.06
CMTM4-204ENST00000563952 GAGE12BA1L429 117 aa21.65■■□□□ 1.06
CMTM4-204ENST00000563952 GAGE7O76087 117 aa21.65■■□□□ 1.06
CMTM4-204ENST00000563952 GAGE12FP0CL80 117 aa21.65■■□□□ 1.06
CMTM4-204ENST00000563952 GAGE12GP0CL81 117 aa21.65■■□□□ 1.06
CMTM4-204ENST00000563952 GAGE12IP0CL82 117 aa21.65■■□□□ 1.06
CMTM4-204ENST00000563952 ARL14EPLP0DKL9 152 aa21.65■■□□□ 1.06
CMTM4-204ENST00000563952 FAM74A1Q5RGS3 127 aa21.65■■□□□ 1.06
CMTM4-204ENST00000563952 MBP02144 154 aa21.64■■□□□ 1.05
CMTM4-204ENST00000563952 SERF2P84101 59 aa21.64■■□□□ 1.05
CMTM4-204ENST00000563952 Q6ZQT7 251 aa21.64■■□□□ 1.05
CMTM4-204ENST00000563952 EIF4E3Q8N5X7 224 aaKnown RBP21.64■■□□□ 1.05
CMTM4-204ENST00000563952 RAB24Q969Q5 203 aa21.64■■□□□ 1.05
CMTM4-204ENST00000563952 G3V3Q6 166 aa21.63■■□□□ 1.05
CMTM4-204ENST00000563952 RGS13O14921 159 aa21.63■■□□□ 1.05
CMTM4-204ENST00000563952 C15orf53Q8NAA6 179 aa21.63■■□□□ 1.05
CMTM4-204ENST00000563952 ZNF680Q8NEM1 530 aa21.63■■□□□ 1.05
CMTM4-204ENST00000563952 LINC00467Q9BRT7 94 aa21.63■■□□□ 1.05
CMTM4-204ENST00000563952 GSN-AS1Q9NRJ2 163 aa21.63■■□□□ 1.05
CMTM4-204ENST00000563952 TRBV7-9A0A0J9YWB2 115 aa21.62■■□□□ 1.05
CMTM4-204ENST00000563952 STAG3L2P0CL84 134 aa21.62■■□□□ 1.05
CMTM4-204ENST00000563952 STAG3L3P0CL85 134 aa21.62■■□□□ 1.05
CMTM4-204ENST00000563952 LINC00612Q8N6U2 182 aa21.62■■□□□ 1.05
CMTM4-204ENST00000563952 ANXA2RQ3ZCQ2 193 aa21.61■■□□□ 1.05
CMTM4-204ENST00000563952 C11orf72Q8NBR9 251 aa21.61■■□□□ 1.05
CMTM4-204ENST00000563952 GNPNAT1Q96EK6 184 aaPredicted RBP21.61■■□□□ 1.05
CMTM4-204ENST00000563952 ARPC5O15511 151 aa21.6■■□□□ 1.05
CMTM4-204ENST00000563952 DAZ2Q13117 558 aaKnown RBP21.6■■□□□ 1.05
CMTM4-204ENST00000563952 GOLT1AQ6ZVE7 132 aa21.6■■□□□ 1.05
CMTM4-204ENST00000563952 IGHV1OR15-1A0A075B7D0 117 aa21.59■■□□□ 1.05
CMTM4-204ENST00000563952 SMLR1H3BR10 107 aa21.59■■□□□ 1.05
CMTM4-204ENST00000563952 GCHFRP30047 84 aa21.59■■□□□ 1.05
CMTM4-204ENST00000563952 Q6ZTI0 123 aa21.59■■□□□ 1.05
CMTM4-204ENST00000563952 ACTR3CQ9C0K3 210 aaPredicted RBP21.59■■□□□ 1.05
CMTM4-204ENST00000563952 TP53TG3Q9ULZ0 132 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms