RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ZNF331Q9NQX6 463 aaPredicted RBP11.28□□□□□ -0.6
RNF40-205ENST00000563909 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 TRAV8-2A0A0B4J237 113 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 NBDYA0A0U1RRE5 68 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 UMAD1C9J7I0 102 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 NBEAP1P0C6P0 100 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 STAG3L2P0CL84 134 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 STAG3L3P0CL85 134 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 KRTAP10-2P60368 255 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 PSG9Q00887 426 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 Q5VSD8 79 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 CSNK1G2-AS1Q8NCQ2 148 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 RAB24Q969Q5 203 aa11.27□□□□□ -0.61
RNF40-205ENST00000563909 CTXND1A0A1B0GTU2 59 aa11.26□□□□□ -0.61
RNF40-205ENST00000563909 KNCNA6PVL3 124 aa11.26□□□□□ -0.61
RNF40-205ENST00000563909 H3BTX0 84 aa11.26□□□□□ -0.61
RNF40-205ENST00000563909 NKX2-5P52952 324 aaPredicted RBP11.26□□□□□ -0.61
RNF40-205ENST00000563909 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
RNF40-205ENST00000563909 PSG3Q16557 428 aa11.26□□□□□ -0.61
RNF40-205ENST00000563909 BLNKQ8WV28 456 aa11.26□□□□□ -0.61
RNF40-205ENST00000563909 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
RNF40-205ENST00000563909 ZNF503Q96F45 646 aa11.26□□□□□ -0.61
RNF40-205ENST00000563909 C20orf173Q96LM9 149 aa11.26□□□□□ -0.61
RNF40-205ENST00000563909 HMCN2Q8NDA2 5059 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 J3QL48 77 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 SLC17A3O00476 420 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 HMGB3O15347 200 aaKnown RBP11.25□□□□□ -0.61
RNF40-205ENST00000563909 EIF3GO75821 320 aaKnown RBP eCLIP11.25□□□□□ -0.61
RNF40-205ENST00000563909 CXorf1O96002 111 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 OR10J4P0C629 311 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 FAM3BP58499 235 aaPredicted RBP11.25□□□□□ -0.61
RNF40-205ENST00000563909 ACTL10Q5JWF8 245 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 IGFL4Q6B9Z1 124 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 EBLN2Q6P2I7 272 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 DPPA3Q6W0C5 159 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 FOXI2Q6ZQN5 318 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 RNF182Q8N6D2 247 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 TMED6Q8WW62 240 aa11.25□□□□□ -0.61
RNF40-205ENST00000563909 NDUFB4O95168 129 aa11.24□□□□□ -0.61
RNF40-205ENST00000563909 SPART-AS1P0CW21 52 aa11.24□□□□□ -0.61
RNF40-205ENST00000563909 ARL14EPLP0DKL9 152 aa11.24□□□□□ -0.61
RNF40-205ENST00000563909 LYPD1Q8N2G4 141 aa11.24□□□□□ -0.61
RNF40-205ENST00000563909 ZNF738Q8NE65 137 aa11.24□□□□□ -0.61
RNF40-205ENST00000563909 FRZBQ92765 325 aa11.24□□□□□ -0.61
RNF40-205ENST00000563909 SAV1Q9H4B6 383 aaPredicted RBP11.24□□□□□ -0.61
RNF40-205ENST00000563909 AAMDCQ9H7C9 122 aa11.24□□□□□ -0.61
RNF40-205ENST00000563909 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
RNF40-205ENST00000563909 HLA-DRB4P13762 266 aa11.23□□□□□ -0.61
RNF40-205ENST00000563909 HTN3P15516 51 aa11.23□□□□□ -0.61
RNF40-205ENST00000563909 RAB5CP51148 216 aa11.23□□□□□ -0.61
RNF40-205ENST00000563909 EMP1P54849 157 aa11.23□□□□□ -0.61
RNF40-205ENST00000563909 ZNF726P1Q15940 193 aa11.23□□□□□ -0.61
RNF40-205ENST00000563909 MRPL53Q96EL3 112 aaKnown RBP11.23□□□□□ -0.61
RNF40-205ENST00000563909 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
RNF40-205ENST00000563909 TMEM167BQ9NRX6 74 aa11.23□□□□□ -0.61
RNF40-205ENST00000563909 HLA-DRB4X5D2U9 266 aa11.23□□□□□ -0.61
RNF40-205ENST00000563909 H3BMM0 161 aa11.22□□□□□ -0.61
RNF40-205ENST00000563909 DUSP14O95147 198 aaKnown RBP11.22□□□□□ -0.61
RNF40-205ENST00000563909 GCHFRP30047 84 aa11.22□□□□□ -0.61
RNF40-205ENST00000563909 SSX7Q7RTT5 188 aa11.22□□□□□ -0.61
RNF40-205ENST00000563909 RPUSD4Q96CM3 377 aaKnown RBP11.22□□□□□ -0.61
RNF40-205ENST00000563909 A0A0J9YX75 114 aa11.21□□□□□ -0.61
RNF40-205ENST00000563909 MAP1LC3B2A6NCE7 125 aa11.21□□□□□ -0.61
RNF40-205ENST00000563909 NUTF2P61970 127 aaKnown RBP11.21□□□□□ -0.61
RNF40-205ENST00000563909 RANP62826 216 aaKnown RBP11.21□□□□□ -0.61
RNF40-205ENST00000563909 GDF5OSQ5U4N7 250 aa11.21□□□□□ -0.61
RNF40-205ENST00000563909 TMEM88Q6PEY1 159 aa11.21□□□□□ -0.61
RNF40-205ENST00000563909 EXOC3-AS1Q8N2X6 119 aa11.21□□□□□ -0.61
RNF40-205ENST00000563909 FAM213BQ8TBF2 198 aa11.21□□□□□ -0.61
RNF40-205ENST00000563909 SUN5Q8TC36 379 aa11.21□□□□□ -0.61
RNF40-205ENST00000563909 PHYHIPLQ96FC7 376 aa11.21□□□□□ -0.61
RNF40-205ENST00000563909 CLUHP3Q96NS8 147 aa11.21□□□□□ -0.61
RNF40-205ENST00000563909 MAP1LC3BQ9GZQ8 125 aa11.21□□□□□ -0.61
RNF40-205ENST00000563909 ZNF705FA8MVS1 300 aaPredicted RBP11.2□□□□□ -0.62
RNF40-205ENST00000563909 F6UB75 175 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 FHITP49789 147 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 SULT1A2P50226 295 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 DEFB1P60022 68 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 ICAM4Q14773 271 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 FAM74A1Q5RGS3 127 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 IQCF2Q8IXL9 164 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 OR4B1Q8NGF8 309 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 OR8A1Q8NGG7 326 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 ZNRF2Q8NHG8 242 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 C1QTNF4Q9BXJ3 329 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 Q9H3A6 140 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
RNF40-205ENST00000563909 H2AFB1P0C5Y9 115 aa11.19□□□□□ -0.62
RNF40-205ENST00000563909 CSN1S1P47710 185 aa11.19□□□□□ -0.62
RNF40-205ENST00000563909 FGF8P55075 233 aaPredicted RBP11.19□□□□□ -0.62
RNF40-205ENST00000563909 XGP55808 180 aa11.19□□□□□ -0.62
RNF40-205ENST00000563909 OR10J6PQ8NGY7 276 aa11.19□□□□□ -0.62
RNF40-205ENST00000563909 OTORQ9NRC9 128 aa11.19□□□□□ -0.62
RNF40-205ENST00000563909 MDFICQ9P1T7 246 aa11.19□□□□□ -0.62
RNF40-205ENST00000563909 XCL2Q9UBD3 114 aa11.19□□□□□ -0.62
RNF40-205ENST00000563909 PGPA6NDG6 321 aa11.18□□□□□ -0.62
RNF40-205ENST00000563909 BOLA2-SMG1P6H3BVE0 249 aa11.18□□□□□ -0.62
RNF40-205ENST00000563909 M0R3E3 92 aa11.18□□□□□ -0.62
RNF40-205ENST00000563909 CNN1P51911 297 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms