RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TRGV9Q99603 122 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 TMEM208Q9BTX3 173 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 CYTL1Q9NRR1 136 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 RPRMQ9NS64 109 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 IGSF23A1L1A6 192 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 SMCO3A2RU48 225 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 FAM24AA6NFZ4 105 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 KRTAP29-1A8MX34 341 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-204ENST00000563739 E5RGE8 158 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 FNDC10F2Z333 226 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 TAAR5O14804 337 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 FABP1P07148 127 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 RPL12P30050 165 aaKnown RBP7.04□□□□□ -1.28
SF3B3-204ENST00000563739 SULT1A1P50225 295 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 LYZP61626 148 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 SLC38A11Q08AI6 406 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 ALKAL2Q6UX46 152 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 STX12Q86Y82 276 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 STOML3Q8TAV4 291 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 GNPNAT1Q96EK6 184 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-204ENST00000563739 PHYHIPLQ96FC7 376 aa7.04□□□□□ -1.28
SF3B3-204ENST00000563739 ZNF471Q9BX82 626 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-204ENST00000563739 NOP10Q9NPE3 64 aaKnown RBP7.04□□□□□ -1.28
SF3B3-204ENST00000563739 CST7O76096 145 aa7.03□□□□□ -1.28
SF3B3-204ENST00000563739 M6PRP20645 277 aa7.03□□□□□ -1.28
SF3B3-204ENST00000563739 KRTAP10-4P60372 401 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-204ENST00000563739 Q6ZSN1 163 aa7.03□□□□□ -1.28
SF3B3-204ENST00000563739 TMEM144Q7Z5S9 345 aa7.03□□□□□ -1.28
SF3B3-204ENST00000563739 TMEM252Q8N6L7 170 aa7.03□□□□□ -1.28
SF3B3-204ENST00000563739 GGACTQ9BVM4 153 aa7.03□□□□□ -1.28
SF3B3-204ENST00000563739 FAM30AQ9NZY2 134 aa7.03□□□□□ -1.28
SF3B3-204ENST00000563739 TNXBP22105 4242 aa7.03□□□□□ -1.28
SF3B3-204ENST00000563739 ZNF98A6NK75 572 aa7.02□□□□□ -1.29
SF3B3-204ENST00000563739 NMBP08949 121 aa7.02□□□□□ -1.29
SF3B3-204ENST00000563739 TPT1P13693 172 aaKnown RBP7.02□□□□□ -1.29
SF3B3-204ENST00000563739 TAS2R60P59551 318 aa7.02□□□□□ -1.29
SF3B3-204ENST00000563739 HBG1P69891 147 aa7.02□□□□□ -1.29
SF3B3-204ENST00000563739 HBG2P69892 147 aa7.02□□□□□ -1.29
SF3B3-204ENST00000563739 BAXQ07812 192 aa7.02□□□□□ -1.29
SF3B3-204ENST00000563739 PCNPQ8WW12 178 aaKnown RBP7.02□□□□□ -1.29
SF3B3-204ENST00000563739 C16orf74Q96GX8 76 aa7.02□□□□□ -1.29
SF3B3-204ENST00000563739 C16orf92Q96LL3 132 aa7.02□□□□□ -1.29
SF3B3-204ENST00000563739 PARD6GQ9BYG4 376 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-204ENST00000563739 TMPRSS5Q9H3S3 457 aa7.02□□□□□ -1.29
SF3B3-204ENST00000563739 MED9Q9NWA0 146 aa7.02□□□□□ -1.29
SF3B3-204ENST00000563739 TIMM8BQ9Y5J9 83 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-204ENST00000563739 UBE2L5PA0A1B0GUS4 154 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 H3BNG1 76 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 GATA2P23769 480 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-204ENST00000563739 MEOX2P50222 304 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 ERVFC1-1P60608 527 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 EIF5AP63241 154 aaKnown RBP7.01□□□□□ -1.29
SF3B3-204ENST00000563739 OR5I1Q13606 314 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 VWC2Q2TAL6 325 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 TEPPQ6URK8 271 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 CYP2G1PQ6ZSU1 146 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 OR8I2Q8N0Y5 310 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 BPIFCQ8NFQ6 507 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 TMEM263Q8WUH6 116 aaKnown RBP7.01□□□□□ -1.29
SF3B3-204ENST00000563739 RSG1Q9BU20 258 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 TMEM147Q9BVK8 224 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 SLC25A31Q9H0C2 315 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 NPVFQ9HCQ7 196 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 UQCC1Q9NVA1 299 aa7.01□□□□□ -1.29
SF3B3-204ENST00000563739 MRPS12O15235 138 aaKnown RBP7□□□□□ -1.29
SF3B3-204ENST00000563739 DUSP14O95147 198 aaKnown RBP7□□□□□ -1.29
SF3B3-204ENST00000563739 LINC00869P0C866 280 aa7□□□□□ -1.29
SF3B3-204ENST00000563739 B2MP61769 119 aa7□□□□□ -1.29
SF3B3-204ENST00000563739 SELENOTP62341 195 aa7□□□□□ -1.29
SF3B3-204ENST00000563739 LCE2CQ5TA81 110 aa7□□□□□ -1.29
SF3B3-204ENST00000563739 COMMD7Q86VX2 200 aa7□□□□□ -1.29
SF3B3-204ENST00000563739 OR8A1Q8NGG7 326 aa7□□□□□ -1.29
SF3B3-204ENST00000563739 OR5C1Q8NGR4 320 aa7□□□□□ -1.29
SF3B3-204ENST00000563739 LRRC20Q8TCA0 184 aa7□□□□□ -1.29
SF3B3-204ENST00000563739 LINC01587Q99440 93 aa7□□□□□ -1.29
SF3B3-204ENST00000563739 MGST2Q99735 147 aa7□□□□□ -1.29
SF3B3-204ENST00000563739 GAGE12BA1L429 117 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 H3BRN7 92 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 AGPAT2O15120 278 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 GAGE7O76087 117 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 NXPH4O95158 308 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 GAGE12FP0CL80 117 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 GAGE12GP0CL81 117 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 GAGE12IP0CL82 117 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 NHLH2Q02577 135 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 ATP6V1FQ16864 119 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 FAM74A1Q5RGS3 127 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 RPL7L1Q6DKI1 246 aaKnown RBP6.99□□□□□ -1.29
SF3B3-204ENST00000563739 Q6ZTI0 123 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 TMEM256Q8N2U0 113 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 ARV1Q9H2C2 271 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 SLC25A22Q9H936 323 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 SLC45A2Q9UMX9 530 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 WDR83OSQ9Y284 106 aa6.99□□□□□ -1.29
SF3B3-204ENST00000563739 BORCS7-ASMTA0A0B4J1R7 106 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 LRCOL1A6NCL2 159 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 SIVA1O15304 175 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 ORM2P19652 201 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 FGF7P21781 194 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 GCSHP23434 173 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms