RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 RPUSD4Q96CM3 377 aaKnown RBP3.21□□□□□ -1.9
LINC00254-201ENST00000563416 TMEM101Q96IK0 257 aa3.21□□□□□ -1.9
LINC00254-201ENST00000563416 TMEM56Q96MV1 263 aa3.21□□□□□ -1.9
LINC00254-201ENST00000563416 TMEM222Q9H0R3 208 aa3.21□□□□□ -1.9
LINC00254-201ENST00000563416 ZNF355PQ9NSJ1 428 aa3.21□□□□□ -1.9
LINC00254-201ENST00000563416 FKBP11Q9NYL4 201 aa3.21□□□□□ -1.9
LINC00254-201ENST00000563416 COPZ2Q9P299 210 aa3.21□□□□□ -1.9
LINC00254-201ENST00000563416 SCP2D1Q9UJQ7 156 aa3.21□□□□□ -1.9
LINC00254-201ENST00000563416 C14orf166Q9Y224 244 aaKnown RBP3.21□□□□□ -1.9
LINC00254-201ENST00000563416 TMEM56-RWDD3S4R434 201 aa3.21□□□□□ -1.9
LINC00254-201ENST00000563416 DNAH7Q8WXX0 4024 aa3.21□□□□□ -1.9
LINC00254-201ENST00000563416 TENM3Q9P273 2699 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 K7EN84 100 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 SNAI2O43623 268 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 SNAPC5O75971 98 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 ATG12O94817 140 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 REG1AP05451 166 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 GIPP09681 153 aaPredicted RBP3.2□□□□□ -1.9
LINC00254-201ENST00000563416 OR5AL1P0C617 328 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 OR13C7P0DN81 318 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 IL7P13232 177 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 AKR1C2P52895 323 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 RAB25P57735 213 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 HSPE1P61604 102 aaKnown RBP3.2□□□□□ -1.9
LINC00254-201ENST00000563416 ATP5G2Q06055 141 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 SP6Q3SY56 376 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 TMEM128Q5BJH2 165 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 NMSQ5H8A3 153 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 GCSAMLQ5JQS6 135 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 ZNF493Q6ZR52 646 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 LINC00173Q6ZV60 143 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 SGPP2Q8IWX5 399 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 RBPMSQ93062 196 aaKnown RBP3.2□□□□□ -1.9
LINC00254-201ENST00000563416 MARC2Q969Z3 335 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 SLC25A21Q9BQT8 299 aaPredicted RBP3.2□□□□□ -1.9
LINC00254-201ENST00000563416 PUS1Q9Y606 427 aaKnown RBP eCLIP3.2□□□□□ -1.9
LINC00254-201ENST00000563416 F11RQ9Y624 299 aaKnown RBP3.2□□□□□ -1.9
LINC00254-201ENST00000563416 URGCP-MRPS24S4R325 110 aa3.2□□□□□ -1.9
LINC00254-201ENST00000563416 TRBV7-1A0A0A6YYK4 115 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 IGHV3OR16-9A0A0B4J2B5 98 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 PIGBOS1A0A0B4J2F0 54 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 DUXBA0A1W2PPF3 345 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 NAP1L6A6NFF2 107 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 A8MWP6 167 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 PPP5D1E7EU14 171 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 H7C1H1 209 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 K7EIL1 84 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 K7EIM0 57 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 LGALS9O00182 355 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 CYB5BO43169 146 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 GGCTO75223 188 aaKnown RBP3.19□□□□□ -1.9
LINC00254-201ENST00000563416 NDUFB6O95139 128 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 IGLV1-51P01701 117 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 HLA-AP01891 365 aaKnown RBP3.19□□□□□ -1.9
LINC00254-201ENST00000563416 PRB2P02812 416 aaPredicted RBP3.19□□□□□ -1.9
LINC00254-201ENST00000563416 DEFA4P12838 97 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 BSXQ3C1V8 233 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 TRIQKQ629K1 86 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 IL34Q6ZMJ4 242 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 SSX7Q7RTT5 188 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 CAMK2N1Q7Z7J9 78 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 GPHB5Q86YW7 130 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 SLC35G3Q8N808 338 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 ZNF738Q8NE65 137 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 OR1P1Q8NH06 330 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 C7orf50Q9BRJ6 194 aaKnown RBP3.19□□□□□ -1.9
LINC00254-201ENST00000563416 CCDC32Q9BV29 185 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 STAB2Q8WWQ8 2551 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
LINC00254-201ENST00000563416 DYNC2H1Q8NCM8 4307 aaKnown RBP3.18□□□□□ -1.9
LINC00254-201ENST00000563416 I3L2K1 104 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 CORTO00230 105 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 PLA2G10O15496 165 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 TGOLN2O43493 480 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 PITX3O75364 302 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 UPK1BO75841 260 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 SFT2D2O95562 160 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 SULT1A3P0DMM9 295 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 SULT1A4P0DMN0 295 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 RNASE2P10153 161 aaKnown RBP3.18□□□□□ -1.9
LINC00254-201ENST00000563416 SLC25A6P12236 298 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 AKR1C4P17516 323 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 CCR6P51684 374 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 ZNF138P52744 262 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 SYNJ2BPP57105 145 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 SPCS3P61009 180 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 ERHP84090 104 aaKnown RBP3.18□□□□□ -1.9
LINC00254-201ENST00000563416 REG3AQ06141 175 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 PPP1R1AQ13522 171 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 GUCA2BQ16661 112 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 CLEC19AQ6UXS0 136 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 LYZL2Q7Z4W2 148 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 TMED4Q7Z7H5 227 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 LGI3Q8N145 548 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 RNASE11Q8TAA1 199 aaKnown RBP3.18□□□□□ -1.9
LINC00254-201ENST00000563416 S100ZQ8WXG8 99 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 GPR146Q96CH1 333 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 OR4C12Q96R67 309 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 PDCD10Q9BUL8 212 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms