RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 C7orf71A4D174 169 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 KLLNB2CW77 178 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 PYYP10082 97 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 FGF7P21781 194 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 HBG1P69891 147 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 HBG2P69892 147 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 CD300CQ08708 224 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 ATP6V1FQ16864 119 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 TTC32Q5I0X7 151 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 C11orf72Q8NBR9 251 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 VSIG2Q96IQ7 327 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 LINC00467Q9BRT7 94 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 GSN-AS1Q9NRJ2 163 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 MRPS16Q9Y3D3 137 aaKnown RBP10.87□□□□□ -0.67
CLK3-211ENST00000563297 TIMM9Q9Y5J7 89 aa10.87□□□□□ -0.67
CLK3-211ENST00000563297 PDE6HQ13956 83 aa10.86□□□□□ -0.67
CLK3-211ENST00000563297 GCSAMLQ5JQS6 135 aa10.86□□□□□ -0.67
CLK3-211ENST00000563297 SPATA12Q7Z6I5 190 aa10.86□□□□□ -0.67
CLK3-211ENST00000563297 STX12Q86Y82 276 aa10.86□□□□□ -0.67
CLK3-211ENST00000563297 EXOC3-AS1Q8N2X6 119 aa10.86□□□□□ -0.67
CLK3-211ENST00000563297 C18orf15Q96N68 181 aa10.86□□□□□ -0.67
CLK3-211ENST00000563297 PTTG2Q9NZH5 202 aa10.86□□□□□ -0.67
CLK3-211ENST00000563297 TRGV2A0A075B6R0 118 aa10.85□□□□□ -0.67
CLK3-211ENST00000563297 A0A096LPF7 62 aa10.85□□□□□ -0.67
CLK3-211ENST00000563297 A0A1W2PPQ1 181 aa10.85□□□□□ -0.67
CLK3-211ENST00000563297 RNASE4P34096 147 aaKnown RBP10.85□□□□□ -0.67
CLK3-211ENST00000563297 BTN1A1Q13410 526 aa10.85□□□□□ -0.67
CLK3-211ENST00000563297 ANXA2RQ3ZCQ2 193 aa10.85□□□□□ -0.67
CLK3-211ENST00000563297 C9orf47Q6ZRZ4 202 aa10.85□□□□□ -0.67
CLK3-211ENST00000563297 EIF4E3Q8N5X7 224 aaKnown RBP10.85□□□□□ -0.67
CLK3-211ENST00000563297 ZNF680Q8NEM1 530 aa10.85□□□□□ -0.67
CLK3-211ENST00000563297 BLNKQ8WV28 456 aa10.85□□□□□ -0.67
CLK3-211ENST00000563297 GPN1Q9HCN4 374 aaPredicted RBP10.85□□□□□ -0.67
CLK3-211ENST00000563297 KLF12Q9Y4X4 402 aa10.85□□□□□ -0.67
CLK3-211ENST00000563297 MPDU1O75352 247 aa10.84□□□□□ -0.67
CLK3-211ENST00000563297 CRISP2P16562 243 aa10.84□□□□□ -0.67
CLK3-211ENST00000563297 NHLH2Q02577 135 aa10.84□□□□□ -0.67
CLK3-211ENST00000563297 MAPKAPK5-AS1Q8N8E1 139 aa10.84□□□□□ -0.67
CLK3-211ENST00000563297 FAM167A-AS1Q96KT0 104 aa10.84□□□□□ -0.67
CLK3-211ENST00000563297 SLC25A2Q9BXI2 301 aa10.84□□□□□ -0.67
CLK3-211ENST00000563297 NPCDR1Q9BY65 106 aa10.84□□□□□ -0.67
CLK3-211ENST00000563297 FUT9Q9Y231 359 aa10.84□□□□□ -0.67
CLK3-211ENST00000563297 TRGV1A0A0A0MS02 117 aa10.83□□□□□ -0.68
CLK3-211ENST00000563297 FAM240BA0A1B0GVZ2 78 aa10.83□□□□□ -0.68
CLK3-211ENST00000563297 SPINK4O60575 86 aa10.83□□□□□ -0.68
CLK3-211ENST00000563297 GPX1P07203 203 aa10.83□□□□□ -0.68
CLK3-211ENST00000563297 BTF3P20290 206 aaKnown RBP10.83□□□□□ -0.68
CLK3-211ENST00000563297 KRTAP10-2P60368 255 aa10.83□□□□□ -0.68
CLK3-211ENST00000563297 ICAM4Q14773 271 aa10.83□□□□□ -0.68
CLK3-211ENST00000563297 ZFAND2AQ8N6M9 145 aa10.83□□□□□ -0.68
CLK3-211ENST00000563297 VGLL1Q99990 258 aa10.83□□□□□ -0.68
CLK3-211ENST00000563297 CCDC32Q9BV29 185 aa10.83□□□□□ -0.68
CLK3-211ENST00000563297 AAMDCQ9H7C9 122 aa10.83□□□□□ -0.68
CLK3-211ENST00000563297 DNAH5Q8TE73 4624 aa10.82□□□□□ -0.68
CLK3-211ENST00000563297 IGKV2-40A0A087WW87 121 aaPredicted RBP10.82□□□□□ -0.68
CLK3-211ENST00000563297 IGKV2D-40P01614 121 aaPredicted RBP10.82□□□□□ -0.68
CLK3-211ENST00000563297 NMBP08949 121 aa10.82□□□□□ -0.68
CLK3-211ENST00000563297 NBEAP1P0C6P0 100 aa10.82□□□□□ -0.68
CLK3-211ENST00000563297 TCL1AP56279 114 aa10.82□□□□□ -0.68
CLK3-211ENST00000563297 Q6ZQT7 251 aa10.82□□□□□ -0.68
CLK3-211ENST00000563297 MIR17HGQ75NE6 70 aa10.82□□□□□ -0.68
CLK3-211ENST00000563297 TP53TG3Q9ULZ0 132 aa10.82□□□□□ -0.68
CLK3-211ENST00000563297 IBA57Q5T440 356 aaKnown RBP10.81□□□□□ -0.68
CLK3-211ENST00000563297 TMEM78Q5T7P6 136 aa10.81□□□□□ -0.68
CLK3-211ENST00000563297 PRR9Q5T870 116 aa10.81□□□□□ -0.68
CLK3-211ENST00000563297 FAM122CQ6P4D5 195 aa10.81□□□□□ -0.68
CLK3-211ENST00000563297 OR5C1Q8NGR4 320 aa10.81□□□□□ -0.68
CLK3-211ENST00000563297 THAP6Q8TBB0 222 aa10.81□□□□□ -0.68
CLK3-211ENST00000563297 OR51M1Q9H341 326 aa10.81□□□□□ -0.68
CLK3-211ENST00000563297 ZNF492Q9P255 531 aa10.81□□□□□ -0.68
CLK3-211ENST00000563297 APOBP04114 4563 aaKnown RBP10.8□□□□□ -0.68
CLK3-211ENST00000563297 RGS13O14921 159 aa10.8□□□□□ -0.68
CLK3-211ENST00000563297 SIX6O95475 246 aa10.8□□□□□ -0.68
CLK3-211ENST00000563297 Q8N1X5 172 aa10.8□□□□□ -0.68
CLK3-211ENST00000563297 IGHV1OR15-1A0A075B7D0 117 aa10.79□□□□□ -0.68
CLK3-211ENST00000563297 SIVA1O15304 175 aa10.79□□□□□ -0.68
CLK3-211ENST00000563297 PAX4O43316 350 aa10.79□□□□□ -0.68
CLK3-211ENST00000563297 LINC00315P59091 139 aa10.79□□□□□ -0.68
CLK3-211ENST00000563297 MZT2BQ6NZ67 158 aa10.79□□□□□ -0.68
CLK3-211ENST00000563297 Q6ZRN7 208 aaPredicted RBP10.79□□□□□ -0.68
CLK3-211ENST00000563297 ST6GAL2Q96JF0 529 aa10.79□□□□□ -0.68
CLK3-211ENST00000563297 SLC25A31Q9H0C2 315 aa10.79□□□□□ -0.68
CLK3-211ENST00000563297 MRPL16Q9NX20 251 aaKnown RBP10.79□□□□□ -0.68
CLK3-211ENST00000563297 OR5AC2Q9NZP5 309 aa10.79□□□□□ -0.68
CLK3-211ENST00000563297 E5RGE8 158 aa10.78□□□□□ -0.68
CLK3-211ENST00000563297 H0YIZ8 118 aa10.78□□□□□ -0.68
CLK3-211ENST00000563297 IGHV3-53P01767 116 aa10.78□□□□□ -0.68
CLK3-211ENST00000563297 OR10J4P0C629 311 aa10.78□□□□□ -0.68
CLK3-211ENST00000563297 ZNF138P52744 262 aa10.78□□□□□ -0.68
CLK3-211ENST00000563297 ASAH1Q13510 395 aa10.78□□□□□ -0.68
CLK3-211ENST00000563297 FHL2Q14192 279 aa10.78□□□□□ -0.68
CLK3-211ENST00000563297 FXYD5Q96DB9 178 aa10.78□□□□□ -0.68
CLK3-211ENST00000563297 PAXXQ9BUH6 204 aa10.78□□□□□ -0.68
CLK3-211ENST00000563297 WDR61Q9GZS3 305 aaKnown RBP10.78□□□□□ -0.68
CLK3-211ENST00000563297 PRO0255Q9UI72 69 aa10.78□□□□□ -0.68
CLK3-211ENST00000563297 ICOSQ9Y6W8 199 aa10.78□□□□□ -0.68
CLK3-211ENST00000563297 CRYBA4P53673 196 aa10.77□□□□□ -0.69
CLK3-211ENST00000563297 SLAQ13239 276 aa10.77□□□□□ -0.69
CLK3-211ENST00000563297 PHYHIPLQ96FC7 376 aa10.77□□□□□ -0.69
CLK3-211ENST00000563297 MRPL32Q9BYC8 188 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms