RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 KHDC3LQ587J8 217 aa8.61□□□□□ -1.03
NSMCE1-204ENST00000563273 FFAR4Q5NUL3 377 aa8.61□□□□□ -1.03
NSMCE1-204ENST00000563273 EXOC3-AS1Q8N2X6 119 aa8.61□□□□□ -1.03
NSMCE1-204ENST00000563273 AGPAT4-IT1Q9H0P7 198 aa8.61□□□□□ -1.03
NSMCE1-204ENST00000563273 NOP10Q9NPE3 64 aaKnown RBP8.61□□□□□ -1.03
NSMCE1-204ENST00000563273 DNAH6Q9C0G6 4158 aa8.61□□□□□ -1.03
NSMCE1-204ENST00000563273 TRAV12-3A0A0B4J271 114 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 RBAKDNA6NC62 111 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 OR7C2O60412 319 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 ZNF324O75467 553 aaPredicted RBP8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 HTN1P15515 57 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 ERCC8Q13216 396 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 ANXA2RQ3ZCQ2 193 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 TMEM78Q5T7P6 136 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 LINC00336Q6ZUF6 198 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 ARL6IP6Q8N6S5 226 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 ZNF680Q8NEM1 530 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 ZNF503Q96F45 646 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 ZNF492Q9P255 531 aa8.6□□□□□ -1.03
NSMCE1-204ENST00000563273 SNURFLB1AK76 121 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 OR10J4P0C629 311 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 M6PRP20645 277 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 CSN1S1P47710 185 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 UBE2L3P68036 154 aaKnown RBP8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 ZNF266Q14584 549 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 FCN2Q15485 313 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 ACOT6Q3I5F7 207 aaPredicted RBP8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 PQLC2Q6ZP29 291 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 ZFAND2AQ8N6M9 145 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 PHYHIPLQ96FC7 376 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 C18orf15Q96N68 181 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 AQP10Q96PS8 301 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 SMIM3Q9BZL3 60 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 MED28Q9H204 178 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 WFDC1Q9HC57 220 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 LENEPQ9Y5L5 61 aa8.59□□□□□ -1.03
NSMCE1-204ENST00000563273 IGKV2-40A0A087WW87 121 aaPredicted RBP8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 F5H768 121 aa8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 IGKV2D-40P01614 121 aaPredicted RBP8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 GIPP09681 153 aaPredicted RBP8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 ZNF138P52744 262 aa8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 FAM122CQ6P4D5 195 aa8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 UBE2DNLQ8IWF7 75 aa8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 EIF4E3Q8N5X7 224 aaKnown RBP8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 OR2G3Q8NGZ4 309 aa8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 RXFP4Q8TDU9 374 aa8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 TMED6Q8WW62 240 aa8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 FRAS1Q86XX4 4008 aa8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 DNAH10Q8IVF4 4471 aa8.58□□□□□ -1.04
NSMCE1-204ENST00000563273 H3BNG1 76 aa8.57□□□□□ -1.04
NSMCE1-204ENST00000563273 J3KRW8 73 aa8.57□□□□□ -1.04
NSMCE1-204ENST00000563273 GPX1P07203 203 aa8.57□□□□□ -1.04
NSMCE1-204ENST00000563273 CD300CQ08708 224 aa8.57□□□□□ -1.04
NSMCE1-204ENST00000563273 BTN1A1Q13410 526 aa8.57□□□□□ -1.04
NSMCE1-204ENST00000563273 IBA57Q5T440 356 aaKnown RBP8.57□□□□□ -1.04
NSMCE1-204ENST00000563273 Q6ZR54 194 aa8.57□□□□□ -1.04
NSMCE1-204ENST00000563273 C11orf72Q8NBR9 251 aa8.57□□□□□ -1.04
NSMCE1-204ENST00000563273 VGLL1Q99990 258 aa8.57□□□□□ -1.04
NSMCE1-204ENST00000563273 Q9H3A6 140 aa8.57□□□□□ -1.04
NSMCE1-204ENST00000563273 A0A1W2PPV4 95 aa8.56□□□□□ -1.04
NSMCE1-204ENST00000563273 RNASE4P34096 147 aaKnown RBP8.56□□□□□ -1.04
NSMCE1-204ENST00000563273 TCL1AP56279 114 aa8.56□□□□□ -1.04
NSMCE1-204ENST00000563273 RANP62826 216 aaKnown RBP8.56□□□□□ -1.04
NSMCE1-204ENST00000563273 PSMG3Q9BT73 122 aaPredicted RBP8.56□□□□□ -1.04
NSMCE1-204ENST00000563273 OTORQ9NRC9 128 aa8.56□□□□□ -1.04
NSMCE1-204ENST00000563273 DIRC3C9JPN6 131 aa8.55□□□□□ -1.04
NSMCE1-204ENST00000563273 MBP02144 154 aa8.55□□□□□ -1.04
NSMCE1-204ENST00000563273 SERF2P84101 59 aa8.55□□□□□ -1.04
NSMCE1-204ENST00000563273 FAM74A1Q5RGS3 127 aa8.55□□□□□ -1.04
NSMCE1-204ENST00000563273 IGHV1OR15-1A0A075B7D0 117 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 GAGE12BA1L429 117 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 SPINK4O60575 86 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 GAGE7O76087 117 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 GAGE12FP0CL80 117 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 GAGE12GP0CL81 117 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 GAGE12IP0CL82 117 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 RAB2AP61019 212 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 PRR9Q5T870 116 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 Q6AWC8 147 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 OR10G4Q8NGN3 311 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 OR10G9Q8NGN4 311 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 OR10G7Q8NGN6 311 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 SUN5Q8TC36 379 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 ATG101Q9BSB4 218 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 TP53TG3Q9ULZ0 132 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 HECTD4Q9Y4D8 3996 aa8.54□□□□□ -1.04
NSMCE1-204ENST00000563273 SERTM2A0A1B0GWG4 89 aa8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 RGS13O14921 159 aa8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 RTL8CO15255 209 aa8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 STAG3L2P0CL84 134 aa8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 STAG3L3P0CL85 134 aa8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 CCL18P55774 89 aa8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 RGS21Q2M5E4 152 aa8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 Q6ZTI0 123 aa8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 INO80EQ8NBZ0 244 aaPredicted RBP8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 Q8TAT8 98 aa8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 CMTM2Q8TAZ6 248 aa8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 GNPNAT1Q96EK6 184 aaPredicted RBP8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 GSN-AS1Q9NRJ2 163 aa8.53□□□□□ -1.04
NSMCE1-204ENST00000563273 TRAV26-1A0A087WT03 109 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms