RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 IGLV2-11P01706 119 aa10.93□□□□□ -0.66
CDH11-207ENST00000563255 LINC00477Q96M19 166 aa10.93□□□□□ -0.66
CDH11-207ENST00000563255 LINC00479Q96M42 142 aa10.93□□□□□ -0.66
CDH11-207ENST00000563255 VGLL1Q99990 258 aa10.93□□□□□ -0.66
CDH11-207ENST00000563255 PARLQ9H300 379 aa10.93□□□□□ -0.66
CDH11-207ENST00000563255 TMEM218A2RU14 115 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 SFTA3P0C7M3 94 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 HLA-DRB4P13762 266 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 RPL35P42766 123 aaKnown RBP10.92□□□□□ -0.66
CDH11-207ENST00000563255 DEFB1P60022 68 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 UBE2G1P62253 170 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 FLI1Q01543 452 aaPredicted RBP10.92□□□□□ -0.66
CDH11-207ENST00000563255 FAM74A3Q4VXF1 159 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 TMEM78Q5T7P6 136 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 GDF5OSQ5U4N7 250 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 APRG1Q8IVJ8 170 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 CLUHP3Q96NS8 147 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 CITED4Q96RK1 184 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 DERL1Q9BUN8 251 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 AGPAT4-IT1Q9H0P7 198 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 PSG8Q9UQ74 426 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 HLA-DRB4X5D2U9 266 aa10.92□□□□□ -0.66
CDH11-207ENST00000563255 TRAV34A0A0B4J273 112 aa10.91□□□□□ -0.66
CDH11-207ENST00000563255 A8MTW9 85 aa10.91□□□□□ -0.66
CDH11-207ENST00000563255 H3BMM0 161 aa10.91□□□□□ -0.66
CDH11-207ENST00000563255 ZNF705DP0CH99 300 aaPredicted RBP10.91□□□□□ -0.66
CDH11-207ENST00000563255 ZNF705BP0CI00 300 aaPredicted RBP10.91□□□□□ -0.66
CDH11-207ENST00000563255 PRB4P10163 310 aaPredicted RBP10.91□□□□□ -0.66
CDH11-207ENST00000563255 CEBPGP53567 150 aa10.91□□□□□ -0.66
CDH11-207ENST00000563255 KRTAP10-11P60412 298 aa10.91□□□□□ -0.66
CDH11-207ENST00000563255 HIST1H1AQ02539 215 aaPredicted RBP10.91□□□□□ -0.66
CDH11-207ENST00000563255 SOHLH1Q5JUK2 328 aa10.91□□□□□ -0.66
CDH11-207ENST00000563255 Q8N1Y9 231 aa10.91□□□□□ -0.66
CDH11-207ENST00000563255 ZNF492Q9P255 531 aa10.91□□□□□ -0.66
CDH11-207ENST00000563255 LENEPQ9Y5L5 61 aa10.91□□□□□ -0.66
CDH11-207ENST00000563255 TRAV8-1A0A0A6YYK1 113 aa10.9□□□□□ -0.66
CDH11-207ENST00000563255 TRBV7-9A0A0J9YWB2 115 aa10.9□□□□□ -0.66
CDH11-207ENST00000563255 ZNF727A8MUV8 499 aa10.9□□□□□ -0.66
CDH11-207ENST00000563255 C9JCJ5 164 aa10.9□□□□□ -0.66
CDH11-207ENST00000563255 ZNF138P52744 262 aa10.9□□□□□ -0.66
CDH11-207ENST00000563255 ERCC8Q13216 396 aa10.9□□□□□ -0.66
CDH11-207ENST00000563255 ZNF124Q15973 351 aa10.9□□□□□ -0.66
CDH11-207ENST00000563255 DEFB121Q5J5C9 76 aa10.9□□□□□ -0.66
CDH11-207ENST00000563255 SGK494Q96LW2 274 aa10.9□□□□□ -0.66
CDH11-207ENST00000563255 ODF3Q96PU9 254 aa10.9□□□□□ -0.66
CDH11-207ENST00000563255 ZFP30Q9Y2G7 519 aa10.9□□□□□ -0.66
CDH11-207ENST00000563255 DNAH3Q8TD57 4116 aa10.9□□□□□ -0.67
CDH11-207ENST00000563255 KNCNA6PVL3 124 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 LTAP01374 205 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 ZNF674Q2M3X9 581 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 ACTL10Q5JWF8 245 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 SAPCD1Q5SSQ6 148 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 Q86TA4 180 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 STHQ8IWL8 128 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 SMIM12Q96EX1 92 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 FAM19A4Q96LR4 140 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 IGF2BP2-AS1Q96M15 143 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 PRR25Q96S07 402 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 SMIM7Q9BQ49 75 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 SEC11CQ9BY50 192 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 LY96Q9Y6Y9 160 aa10.89□□□□□ -0.67
CDH11-207ENST00000563255 TRBV20OR9-2A0A075B6H5 130 aa10.88□□□□□ -0.67
CDH11-207ENST00000563255 KRBOX1C9JBD0 128 aa10.88□□□□□ -0.67
CDH11-207ENST00000563255 CT45A10P0DMU9 189 aa10.88□□□□□ -0.67
CDH11-207ENST00000563255 GNG4P50150 75 aa10.88□□□□□ -0.67
CDH11-207ENST00000563255 C10orf91Q5T1B1 145 aa10.88□□□□□ -0.67
CDH11-207ENST00000563255 BAGE2Q86Y30 109 aa10.88□□□□□ -0.67
CDH11-207ENST00000563255 TMEM183AQ8IXX5 376 aa10.88□□□□□ -0.67
CDH11-207ENST00000563255 OR4B1Q8NGF8 309 aa10.88□□□□□ -0.67
CDH11-207ENST00000563255 NDFIP1Q9BT67 221 aa10.88□□□□□ -0.67
CDH11-207ENST00000563255 MLST8Q9BVC4 326 aa10.88□□□□□ -0.67
CDH11-207ENST00000563255 F8W036 122 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 K7EIL1 84 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 CRISP2P16562 243 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 ADCYAP1P18509 176 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 TMEM241Q24JQ0 296 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 CENPWQ5EE01 88 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 AMTNQ6UX39 209 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 COX8CQ7Z4L0 72 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 TRPT1Q86TN4 253 aaKnown RBP10.87□□□□□ -0.67
CDH11-207ENST00000563255 DEFB125Q8N687 156 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 Q8TAT8 98 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 TVP23CQ96ET8 276 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 WFDC10AQ9H1F0 79 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 NAT8Q9UHE5 227 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 COL7A1Q02388 2944 aa10.87□□□□□ -0.67
CDH11-207ENST00000563255 TENM3Q9P273 2699 aa10.86□□□□□ -0.67
CDH11-207ENST00000563255 IGLV2-8P01709 118 aa10.86□□□□□ -0.67
CDH11-207ENST00000563255 NIPSNAP3BQ9BS92 247 aa10.86□□□□□ -0.67
CDH11-207ENST00000563255 SDF2L1Q9HCN8 221 aa10.86□□□□□ -0.67
CDH11-207ENST00000563255 TSPOP30536 169 aa10.85□□□□□ -0.67
CDH11-207ENST00000563255 LEPP41159 167 aa10.85□□□□□ -0.67
CDH11-207ENST00000563255 OCC1Q8TAD7 63 aa10.85□□□□□ -0.67
CDH11-207ENST00000563255 CARHSP1Q9Y2V2 147 aaKnown RBP10.85□□□□□ -0.67
CDH11-207ENST00000563255 RBMY1BA6NDE4 496 aaKnown RBP10.84□□□□□ -0.67
CDH11-207ENST00000563255 RBMY1EA6NEQ0 496 aaKnown RBP10.84□□□□□ -0.67
CDH11-207ENST00000563255 A8MZ25 164 aa10.84□□□□□ -0.67
CDH11-207ENST00000563255 IGKV3-20P01619 116 aa10.84□□□□□ -0.67
CDH11-207ENST00000563255 RBMY1DP0C7P1 496 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms