RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 KIR2DL5AQ8N109 375 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 LRRC75A-AS1Q8N1F1 130 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 C16orf92Q96LL3 132 aa16.36■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 ZFYVE26Q68DK2 2539 aa16.35■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 CTRLP40313 264 aa16.35■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 ZNF138P52744 262 aa16.35■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 Q6ZS46 218 aa16.35■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 NPFFR1Q9GZQ6 430 aa16.35■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 IGHV3-11P01762 117 aa16.34■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 IGHV4-59P01825 116 aa16.34■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 UNQ9165/PRO28630Q6UXU0 137 aa16.34■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 FER1L6-AS1Q8NA97 138 aa16.34■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 C14orf144Q96I85 54 aa16.34■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 PPP1R14DQ9NXH3 145 aa16.34■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 TMEM89A2RUT3 159 aa16.33■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 HIST1H1AQ02539 215 aaPredicted RBP16.33■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 DEFB113Q30KQ7 82 aa16.33■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 C9orf47Q6ZRZ4 202 aa16.33■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 NDUFAF3Q9BU61 184 aa16.33■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 VAMP8Q9BV40 100 aa16.33■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 AGPAT4-IT1Q9H0P7 198 aa16.33■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 RNF114Q9Y508 228 aa16.33■□□□□ 0.21
VPS9D1-AS1-202ENST00000562866 FLNCQ14315 2725 aa16.33■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 RNF223E7ERA6 249 aa16.33■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 ORM1P02763 201 aa16.33■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 C3orf79P0CE67 100 aa16.33■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 PRR31Q5SQ13 230 aa16.33■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 ASH1LQ9NR48 2969 aaKnown RBP16.32■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 FAM181BA6NEQ2 426 aa16.32■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 LINC00614P0C842 121 aa16.32■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 IGLC6P0CF74 106 aa16.32■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 LINC01559Q495D7 138 aa16.32■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 URB1-AS1Q96HZ7 61 aa16.32■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 C20orf144Q9BQM9 153 aa16.32■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 IL17RELQ6ZVW7 336 aa16.31■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 Q8N976 141 aa16.31■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 SMAD7O15105 426 aaKnown RBP16.31■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 FSHBP01225 129 aa16.31■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 IGHV4-31P0DP07 118 aa16.31■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 PEF1Q9UBV8 284 aaKnown RBP16.3■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 LENEPQ9Y5L5 61 aa16.3■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 MAPK1IP1LQ8NDC0 245 aa16.29■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 COL12A1Q99715 3063 aa16.29■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 IGHV7-4-1A0A0J9YVY3 117 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 K7EMT4 169 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 OVOL1O14753 267 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 OR5AL1P0C617 328 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 BTF3P20290 206 aaKnown RBP16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 FAM106AQ4KMX7 169 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 Q5PR19 223 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 FAM104BQ5XKR9 115 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 ZNF738Q8NE65 137 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 DAZ1Q9NQZ3 744 aaKnown RBP16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 VPREB3Q9UKI3 123 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 TMEM213A2RRL7 107 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 PSMB8P28062 276 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 KRTAP10-9P60411 292 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 U3KQK5 164 aa16.28■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 KMT2BQ9UMN6 2715 aaPredicted RBP16.27■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 MYO18BQ8IUG5 2567 aa16.27■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 TWIST1Q15672 202 aa16.27■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 PMCHL1Q16048 86 aa16.27■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 LCNL1Q6ZST4 164 aa16.27■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 LINC00477Q96M19 166 aa16.27■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 CNFNQ9BYD5 112 aa16.27■□□□□ 0.2
VPS9D1-AS1-202ENST00000562866 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.27■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 IGHV1-24A0A0C4DH33 117 aa16.26■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 M0QZ24 198 aa16.26■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 SOCS3O14543 225 aa16.26■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 Q6YL49 198 aa16.26■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 OR10J6PQ8NGY7 276 aa16.26■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 ZNF462Q96JM2 2506 aa16.26■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 TMEM95Q3KNT9 176 aa16.26■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 GPHB5Q86YW7 130 aa16.26■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 RHPN1-AS1Q9BWJ2 59 aa16.26■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 PAM16Q9Y3D7 125 aa16.26■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 SPG11Q96JI7 2443 aa16.25■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 SAMD13Q5VXD3 122 aa16.25■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 EBLN2Q6P2I7 272 aa16.25■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 ORMDL3Q8N138 153 aa16.25■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 C20orf173Q96LM9 149 aa16.25■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 SMPXQ9UHP9 88 aa16.25■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 C2orf70A6NJV1 201 aa16.24■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 TDRG1Q3Y452 100 aa16.24■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 LBHQ53QV2 105 aaPredicted RBP16.24■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 FA2HQ7L5A8 372 aa16.24■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 ZNF575Q86XF7 245 aa16.24■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 TMEM70Q9BUB7 260 aa16.24■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 TMEM191AQ9H0A3 160 aa16.24■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 UFC1Q9Y3C8 167 aa16.24■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 UBR5O95071 2799 aaPredicted RBP16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 LEPROTL1O95214 131 aa16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 RPL11P62913 178 aaKnown RBP16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 TM4SF20Q53R12 229 aa16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 PRSS57Q6UWY2 283 aa16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 AMN1Q8IY45 258 aa16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 PRSS3P2Q8NHM4 247 aa16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 PSMG3-AS1Q96PY0 264 aa16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 MIEN1Q9BRT3 115 aa16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 D6R8Y8 96 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms