RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 METTL26Q96S19 204 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 ATP5SQ99766 215 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 SPAG8Q99932 426 aaPredicted RBP3.29□□□□□ -1.88
SMG1-206ENST00000562668 SCRT1Q9BWW7 348 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 SLC25A39Q9BZJ4 359 aaPredicted RBP3.29□□□□□ -1.88
SMG1-206ENST00000562668 SMIM3Q9BZL3 60 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 ARV1Q9H2C2 271 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 MS4A6AQ9H2W1 248 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 PXMP4Q9Y6I8 212 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 SORL1Q92673 2214 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 A0A087X0K7 114 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 TRAV5A0A0B4J249 113 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 RBMY1BA6NDE4 496 aaKnown RBP3.28□□□□□ -1.88
SMG1-206ENST00000562668 RBMY1EA6NEQ0 496 aaKnown RBP3.28□□□□□ -1.88
SMG1-206ENST00000562668 HMSDA8MTL9 139 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 MPDU1O75352 247 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 HYPMO75409 117 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 FABP1P07148 127 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 OR5G3P0C626 314 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 RBMY1DP0C7P1 496 aaKnown RBP3.28□□□□□ -1.88
SMG1-206ENST00000562668 IGLC2P0DOY2 106 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 ORM2P19652 201 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 FGF7P21781 194 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 ZNF345Q14585 488 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 SPATA31B1PQ5VZV4 182 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 LEMD1Q68G75 181 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 RPL7L1Q6DKI1 246 aaKnown RBP3.28□□□□□ -1.88
SMG1-206ENST00000562668 LAMTOR1Q6IAA8 161 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 SIGLEC15Q6ZMC9 328 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 RBPMS2Q6ZRY4 209 aaKnown RBP3.28□□□□□ -1.88
SMG1-206ENST00000562668 KCNRGQ8N5I3 272 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 DEFB125Q8N687 156 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 OR1B1Q8NGR6 318 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 OR2G3Q8NGZ4 309 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 FAM167A-AS1Q96KT0 104 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 RSG1Q9BU20 258 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 PBDC1Q9BVG4 233 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 ARL6Q9H0F7 186 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 NRN1Q9NPD7 142 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 SLC39A9Q9NUM3 307 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 DOK5Q9P104 306 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 ZMAT5Q9UDW3 170 aaKnown RBP3.28□□□□□ -1.88
SMG1-206ENST00000562668 TIMM9Q9Y5J7 89 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 SACSQ9NZJ4 4579 aa3.28□□□□□ -1.88
SMG1-206ENST00000562668 TENM3Q9P273 2699 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 IGKV3-7A0A075B6H7 116 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 FXYD6-FXYD2A0A087WZ82 144 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 HELTA6NFD8 242 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 OR4C46A6NHA9 309 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 KLLNB2CW77 178 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 OR11H12B2RN74 326 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 H3BQ15 152 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 ARPC5O15511 151 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 CDK2AP2O75956 126 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 C1QBP02746 253 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 CD5P06127 495 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 GIG44P09565 113 aaPredicted RBP3.27□□□□□ -1.89
SMG1-206ENST00000562668 ATP6V0CP27449 155 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 NUP62P37198 522 aaPredicted RBP3.27□□□□□ -1.89
SMG1-206ENST00000562668 TFPI2P48307 235 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 DEFB1P60022 68 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 B2MP61769 119 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 GUCA2BQ16661 112 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 LGALSLQ3ZCW2 172 aaPredicted RBP3.27□□□□□ -1.89
SMG1-206ENST00000562668 HIGD2BQ4VC39 106 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 C10orf113Q5VZT2 155 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 SSX7Q7RTT5 188 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 LINC00305Q7Z4B0 112 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 APRG1Q8IVJ8 170 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 SBSPONQ8IVN8 264 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 MRAPQ8TCY5 172 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 B9D2Q9BPU9 175 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 PSMG3Q9BT73 122 aaPredicted RBP3.27□□□□□ -1.89
SMG1-206ENST00000562668 SLC25A2Q9BXI2 301 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 SH3BGRL3Q9H299 93 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 TMEM231Q9H6L2 316 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 DNAJC4Q9NNZ3 241 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 UBQLN2Q9UHD9 624 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 HIGD1AQ9Y241 93 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 RYR2Q92736 4967 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 CSMD3Q7Z407 3707 aa3.27□□□□□ -1.89
SMG1-206ENST00000562668 RYR3Q15413 4870 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 DNAH1Q9P2D7 4330 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 HYDINQ4G0P3 5121 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 A8MTW9 85 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 SLC17A3O00476 420 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 COX7A2P2O60397 106 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 EIF3GO75821 320 aaKnown RBP eCLIP3.26□□□□□ -1.89
SMG1-206ENST00000562668 HLA-DMBP28068 263 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 BMI1P35226 326 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 AP2S1P53680 142 aaPredicted RBP3.26□□□□□ -1.89
SMG1-206ENST00000562668 DEFB131AP59861 70 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 RAB2AP61019 212 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 RAB31Q13636 194 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 ZNF726P1Q15940 193 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 HAGHQ16775 308 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 GDF5OSQ5U4N7 250 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 MIR17HGQ75NE6 70 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 OR8I2Q8N0Y5 310 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms