RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 PGLYRP3Q96LB9 341 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 CMSS1Q9BQ75 279 aaKnown RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 GINS3Q9BRX5 216 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 WFDC10AQ9H1F0 79 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 OR2D2Q9H210 308 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 BANF2Q9H503 90 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 HEATR1Q9H583 2144 aaKnown RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 TMEM14BQ9NUH8 114 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 FKBP11Q9NYL4 201 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 C21orf62Q9NYP8 219 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 AK3Q9UIJ7 227 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 RAB22AQ9UL26 194 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 RBM7Q9Y580 266 aaKnown RBP2.16□□□□□ -2.06
HERC1-215ENST00000561436 MUC2Q02817 5179 aa2.16□□□□□ -2.06
HERC1-215ENST00000561436 DNAH7Q8WXX0 4024 aa2.15□□□□□ -2.06
HERC1-215ENST00000561436 LYSTQ99698 3801 aa2.15□□□□□ -2.06
HERC1-215ENST00000561436 STARD9Q9P2P6 4700 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 IGKV1-6A0A0C4DH72 117 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 LOC100130705A0A1B0GUX0 176 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 M0R129 80 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 PSPHP1O15172 72 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 ARL6IP5O75915 188 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 HLA-AP01891 365 aaKnown RBP2.15□□□□□ -2.07
HERC1-215ENST00000561436 REG1AP05451 166 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 CTSDP07339 412 aaPredicted RBP2.15□□□□□ -2.07
HERC1-215ENST00000561436 NQO2P16083 231 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 PRSS3P35030 304 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 NUP62P37198 522 aaPredicted RBP2.15□□□□□ -2.07
HERC1-215ENST00000561436 HSPA13P48723 471 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 PSMB2P49721 201 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 GTF2A1P52655 376 aaPredicted RBP2.15□□□□□ -2.07
HERC1-215ENST00000561436 B2MP61769 119 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 TTC32Q5I0X7 151 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 OGFRL1Q5TC84 451 aaPredicted RBP2.15□□□□□ -2.07
HERC1-215ENST00000561436 SAMD13Q5VXD3 122 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 SLC25A34Q6PIV7 304 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 ZNF773Q6PK81 442 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 GDPD1Q8N9F7 314 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 OR1P1Q8NH06 330 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 DEDD2Q8WXF8 326 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 TSC22D3Q99576 134 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 GINS4Q9BRT9 223 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 DCUN1D5Q9BTE7 237 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 C9orf16Q9BUW7 83 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 RHPN1-AS1Q9BWJ2 59 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 COMMD5Q9GZQ3 224 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 CCDC90BQ9GZT6 254 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 LPAR5Q9H1C0 372 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 VSIRQ9H7M9 311 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 COMMD9Q9P000 198 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 CACFD1Q9UGQ2 172 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 RBMX2Q9Y388 322 aaKnown RBP2.15□□□□□ -2.07
HERC1-215ENST00000561436 STAB2Q8WWQ8 2551 aa2.15□□□□□ -2.07
HERC1-215ENST00000561436 COL7A1Q02388 2944 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 ARHGAP32A7KAX9 2087 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 ABCA13Q86UQ4 5058 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 TRAV8-4A0A0B4J246 113 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 COLCA2A8K830 154 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 K7EP13 123 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 CORTO00230 105 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 UPK2O00526 184 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 P01737 135 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 PRH1P02810 166 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 CTSGP08311 255 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 UCHL1P09936 223 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 TRAPPC2P0DI81 140 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 TRAPPC2BP0DI82 140 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 NPPCP23582 126 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 ETV1P50549 477 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 SNRPD3P62318 126 aaKnown RBP2.14□□□□□ -2.07
HERC1-215ENST00000561436 GNGT1P63211 74 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 CATR1Q13166 79 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 ATP6V1FQ16864 119 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 C12orf74Q32Q52 190 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 C6orf99Q4VX62 202 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 ACSM3Q53FZ2 586 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 HSD17B12Q53GQ0 312 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 ZNF705AQ6ZN79 300 aaPredicted RBP2.14□□□□□ -2.07
HERC1-215ENST00000561436 UBE2DNLQ8IWF7 75 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 SLC7A5P1Q8MH63 180 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 ZNF555Q8NEP9 628 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 OR1L8Q8NGR8 309 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 CACNG8Q8WXS5 425 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 LSM10Q969L4 123 aaKnown RBP2.14□□□□□ -2.07
HERC1-215ENST00000561436 TMEM56Q96MV1 263 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 PECRQ9BY49 303 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 NXF2Q9GZY0 626 aaKnown RBP2.14□□□□□ -2.07
HERC1-215ENST00000561436 FAM107BQ9H098 131 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 VCX3AQ9NNX9 186 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 ACOT13Q9NPJ3 140 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 NDUFA4L2Q9NRX3 87 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 PRNDQ9UKY0 176 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 S4R3C0 116 aa2.14□□□□□ -2.07
HERC1-215ENST00000561436 TRAV30A0A087WSZ9 112 aa2.13□□□□□ -2.07
HERC1-215ENST00000561436 A0A0A6YYH2 397 aa2.13□□□□□ -2.07
HERC1-215ENST00000561436 NBDYA0A0U1RRE5 68 aa2.13□□□□□ -2.07
HERC1-215ENST00000561436 A0A1B0GW64 132 aa2.13□□□□□ -2.07
HERC1-215ENST00000561436 IGLC7A0M8Q6 106 aa2.13□□□□□ -2.07
HERC1-215ENST00000561436 OR2T8A6NH00 312 aa2.13□□□□□ -2.07
HERC1-215ENST00000561436 A6NJ64 397 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms