RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 LGALSLQ3ZCW2 172 aaPredicted RBP14.62□□□□□ -0.07
TPM1-232ENST00000561425 C9orf47Q6ZRZ4 202 aa14.62□□□□□ -0.07
TPM1-232ENST00000561425 EXOC3-AS1Q8N2X6 119 aa14.62□□□□□ -0.07
TPM1-232ENST00000561425 BLNKQ8WV28 456 aa14.62□□□□□ -0.07
TPM1-232ENST00000561425 C16orf74Q96GX8 76 aa14.62□□□□□ -0.07
TPM1-232ENST00000561425 LINC00477Q96M19 166 aa14.62□□□□□ -0.07
TPM1-232ENST00000561425 LEPP41159 167 aa14.61□□□□□ -0.07
TPM1-232ENST00000561425 NKX2-5P52952 324 aaPredicted RBP14.61□□□□□ -0.07
TPM1-232ENST00000561425 DAD1P61803 113 aa14.61□□□□□ -0.07
TPM1-232ENST00000561425 C9orf62Q8N4C0 152 aa14.61□□□□□ -0.07
TPM1-232ENST00000561425 RNF141Q8WVD5 230 aa14.61□□□□□ -0.07
TPM1-232ENST00000561425 PAXXQ9BUH6 204 aa14.61□□□□□ -0.07
TPM1-232ENST00000561425 AGPAT4-IT1Q9H0P7 198 aa14.61□□□□□ -0.07
TPM1-232ENST00000561425 KLLNB2CW77 178 aa14.6□□□□□ -0.07
TPM1-232ENST00000561425 ICAM4Q14773 271 aa14.6□□□□□ -0.07
TPM1-232ENST00000561425 FFAR4Q5NUL3 377 aa14.6□□□□□ -0.07
TPM1-232ENST00000561425 RPL7L1Q6DKI1 246 aaKnown RBP14.6□□□□□ -0.07
TPM1-232ENST00000561425 TMEM263Q8WUH6 116 aaKnown RBP14.6□□□□□ -0.07
TPM1-232ENST00000561425 AAMDCQ9H7C9 122 aa14.6□□□□□ -0.07
TPM1-232ENST00000561425 CRISP2P16562 243 aa14.59□□□□□ -0.07
TPM1-232ENST00000561425 ERCC8Q13216 396 aa14.59□□□□□ -0.07
TPM1-232ENST00000561425 LYPD1Q8N2G4 141 aa14.59□□□□□ -0.07
TPM1-232ENST00000561425 ZNF471Q9BX82 626 aaPredicted RBP14.59□□□□□ -0.07
TPM1-232ENST00000561425 ZNF324O75467 553 aaPredicted RBP14.58□□□□□ -0.08
TPM1-232ENST00000561425 SLC25A5P05141 298 aaKnown RBP14.58□□□□□ -0.08
TPM1-232ENST00000561425 NMBP08949 121 aa14.58□□□□□ -0.08
TPM1-232ENST00000561425 OR10J4P0C629 311 aa14.58□□□□□ -0.08
TPM1-232ENST00000561425 P0DMU3 169 aa14.58□□□□□ -0.08
TPM1-232ENST00000561425 FAM231AP0DMU4 169 aa14.58□□□□□ -0.08
TPM1-232ENST00000561425 FAM231CP0DMU5 169 aa14.58□□□□□ -0.08
TPM1-232ENST00000561425 EIF5AP63241 154 aaKnown RBP14.58□□□□□ -0.08
TPM1-232ENST00000561425 LINC00612Q8N6U2 182 aa14.58□□□□□ -0.08
TPM1-232ENST00000561425 HSD17B11Q8NBQ5 300 aa14.58□□□□□ -0.08
TPM1-232ENST00000561425 LINC00467Q9BRT7 94 aa14.58□□□□□ -0.08
TPM1-232ENST00000561425 TIMM8BQ9Y5J9 83 aaPredicted RBP14.58□□□□□ -0.08
TPM1-232ENST00000561425 BIRC6Q9NR09 4857 aa14.58□□□□□ -0.08
TPM1-232ENST00000561425 POM121L12Q8N7R1 296 aa14.57□□□□□ -0.08
TPM1-232ENST00000561425 PHYHIPLQ96FC7 376 aa14.57□□□□□ -0.08
TPM1-232ENST00000561425 PYGO2Q9BRQ0 406 aa14.57□□□□□ -0.08
TPM1-232ENST00000561425 CYTL1Q9NRR1 136 aa14.57□□□□□ -0.08
TPM1-232ENST00000561425 TRAV12-3A0A0B4J271 114 aa14.56□□□□□ -0.08
TPM1-232ENST00000561425 TRBV7-9A0A0J9YWB2 115 aa14.56□□□□□ -0.08
TPM1-232ENST00000561425 CBY3A6NI87 242 aa14.56□□□□□ -0.08
TPM1-232ENST00000561425 HTN1P15515 57 aa14.56□□□□□ -0.08
TPM1-232ENST00000561425 VGLL1Q99990 258 aa14.56□□□□□ -0.08
TPM1-232ENST00000561425 C7orf71A4D174 169 aa14.55□□□□□ -0.08
TPM1-232ENST00000561425 OR7C2O60412 319 aa14.55□□□□□ -0.08
TPM1-232ENST00000561425 DEFB130BP0DP73 79 aa14.55□□□□□ -0.08
TPM1-232ENST00000561425 DEFB130AP0DP74 79 aa14.55□□□□□ -0.08
TPM1-232ENST00000561425 M6PRP20645 277 aa14.55□□□□□ -0.08
TPM1-232ENST00000561425 TAS2R45P59539 299 aa14.55□□□□□ -0.08
TPM1-232ENST00000561425 KHDC3LQ587J8 217 aa14.55□□□□□ -0.08
TPM1-232ENST00000561425 FAM122CQ6P4D5 195 aa14.55□□□□□ -0.08
TPM1-232ENST00000561425 ZFAND2AQ8N6M9 145 aa14.55□□□□□ -0.08
TPM1-232ENST00000561425 GNPNAT1Q96EK6 184 aaPredicted RBP14.55□□□□□ -0.08
TPM1-232ENST00000561425 ZNF492Q9P255 531 aa14.55□□□□□ -0.08
TPM1-232ENST00000561425 DNAH10Q8IVF4 4471 aa14.54□□□□□ -0.08
TPM1-232ENST00000561425 IGKV2-40A0A087WW87 121 aaPredicted RBP14.54□□□□□ -0.08
TPM1-232ENST00000561425 RBAKDNA6NC62 111 aa14.54□□□□□ -0.08
TPM1-232ENST00000561425 IGKV2D-40P01614 121 aaPredicted RBP14.54□□□□□ -0.08
TPM1-232ENST00000561425 TPT1P13693 172 aaKnown RBP14.54□□□□□ -0.08
TPM1-232ENST00000561425 HTN3P15516 51 aa14.54□□□□□ -0.08
TPM1-232ENST00000561425 ATP6V0CP27449 155 aa14.54□□□□□ -0.08
TPM1-232ENST00000561425 RANP62826 216 aaKnown RBP14.54□□□□□ -0.08
TPM1-232ENST00000561425 ACOT6Q3I5F7 207 aaPredicted RBP14.54□□□□□ -0.08
TPM1-232ENST00000561425 TMEM88Q6PEY1 159 aa14.54□□□□□ -0.08
TPM1-232ENST00000561425 CCDC28AQ8IWP9 274 aa14.54□□□□□ -0.08
TPM1-232ENST00000561425 NOP10Q9NPE3 64 aaKnown RBP14.54□□□□□ -0.08
TPM1-232ENST00000561425 J3KRW8 73 aa14.53□□□□□ -0.08
TPM1-232ENST00000561425 SLC51BQ86UW2 128 aa14.53□□□□□ -0.08
TPM1-232ENST00000561425 OR2G3Q8NGZ4 309 aa14.53□□□□□ -0.08
TPM1-232ENST00000561425 PSMG3Q9BT73 122 aaPredicted RBP14.53□□□□□ -0.08
TPM1-232ENST00000561425 Q9H3A6 140 aa14.53□□□□□ -0.08
TPM1-232ENST00000561425 ATP5G1P05496 136 aa14.52□□□□□ -0.09
TPM1-232ENST00000561425 ATP5G3P48201 142 aa14.52□□□□□ -0.09
TPM1-232ENST00000561425 UBE2L3P68036 154 aaKnown RBP14.52□□□□□ -0.09
TPM1-232ENST00000561425 DAZ2Q13117 558 aaKnown RBP14.52□□□□□ -0.09
TPM1-232ENST00000561425 RNF212Q495C1 297 aa14.52□□□□□ -0.09
TPM1-232ENST00000561425 PQLC2Q6ZP29 291 aa14.52□□□□□ -0.09
TPM1-232ENST00000561425 STOML3Q8TAV4 291 aa14.52□□□□□ -0.09
TPM1-232ENST00000561425 RAB2AP61019 212 aa14.51□□□□□ -0.09
TPM1-232ENST00000561425 BTN1A1Q13410 526 aa14.51□□□□□ -0.09
TPM1-232ENST00000561425 ANXA2RQ3ZCQ2 193 aa14.51□□□□□ -0.09
TPM1-232ENST00000561425 TMEM78Q5T7P6 136 aa14.51□□□□□ -0.09
TPM1-232ENST00000561425 ARL6IP6Q8N6S5 226 aa14.51□□□□□ -0.09
TPM1-232ENST00000561425 C15orf53Q8NAA6 179 aa14.51□□□□□ -0.09
TPM1-232ENST00000561425 C11orf72Q8NBR9 251 aa14.51□□□□□ -0.09
TPM1-232ENST00000561425 SH3BGRL3Q9H299 93 aa14.51□□□□□ -0.09
TPM1-232ENST00000561425 BOLA1Q9Y3E2 137 aa14.51□□□□□ -0.09
TPM1-232ENST00000561425 DIRC3C9JPN6 131 aa14.5□□□□□ -0.09
TPM1-232ENST00000561425 EIF3GO75821 320 aaKnown RBP eCLIP14.5□□□□□ -0.09
TPM1-232ENST00000561425 ZNF138P52744 262 aa14.5□□□□□ -0.09
TPM1-232ENST00000561425 PRR9Q5T870 116 aa14.5□□□□□ -0.09
TPM1-232ENST00000561425 OR10G4Q8NGN3 311 aa14.5□□□□□ -0.09
TPM1-232ENST00000561425 OR10G9Q8NGN4 311 aa14.5□□□□□ -0.09
TPM1-232ENST00000561425 OR10G7Q8NGN6 311 aa14.5□□□□□ -0.09
TPM1-232ENST00000561425 RXFP4Q8TDU9 374 aa14.5□□□□□ -0.09
TPM1-232ENST00000561425 FRAS1Q86XX4 4008 aa14.5□□□□□ -0.09
TPM1-232ENST00000561425 A0A1W2PPV4 95 aa14.49□□□□□ -0.09
TPM1-232ENST00000561425 GPX1P07203 203 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms