RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 H3BRM9 83 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 M0R2Z0 102 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 SEC11AP67812 179 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 ECSCRQ19T08 205 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 C19orf54Q5BKX5 351 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 C2orf50Q96LR7 162 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 ATP5SQ99766 215 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 SPAG8Q99932 426 aaPredicted RBP9.09□□□□□ -0.95
HERC1-214ENST00000561400 TM2D2Q9BX73 214 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 NRN1Q9NPD7 142 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 SPANXB1Q9NS25 103 aaPredicted RBP9.09□□□□□ -0.95
HERC1-214ENST00000561400 A6NDN8 102 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 PRCDQ00LT1 54 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 ATP5G2Q06055 141 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 WT1-ASQ06250 92 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 C10orf99Q6UWK7 81 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 WNT10AQ9GZT5 417 aa9.09□□□□□ -0.95
HERC1-214ENST00000561400 TRAV41A0A0B4J266 112 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 CT45A10P0DMU9 189 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 PPIFP30405 207 aaKnown RBP9.08□□□□□ -0.96
HERC1-214ENST00000561400 ID3Q02535 119 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 SIGLEC15Q6ZMC9 328 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 ZNF329Q86UD4 541 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 OR10AG1Q8NH19 301 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 SRSF8Q9BRL6 282 aaKnown RBP9.08□□□□□ -0.96
HERC1-214ENST00000561400 ENY2Q9NPA8 101 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 ZNF580Q9UK33 172 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 COL6A5A8TX70 2615 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 LOC102723971A0A1B0GUV8 181 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 CCDC179H3BU77 68 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 IGLL1P15814 213 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 CFHR3Q02985 330 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 GGTLC1Q9BX51 225 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 SPCS1Q9Y6A9 102 aa9.08□□□□□ -0.96
HERC1-214ENST00000561400 CLPSL1A2RUU4 121 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 FAM90A26D6RGX4 464 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 RS1O15537 224 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 GATA2P23769 480 aaPredicted RBP9.07□□□□□ -0.96
HERC1-214ENST00000561400 KCNIP4Q6PIL6 250 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 ADAMTSL5Q6ZMM2 481 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 GRIFINA4D1Z8 144 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 MT-ATP8P03928 68 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 EDN2P20800 178 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 NKX2-1P43699 371 aaPredicted RBP9.07□□□□□ -0.96
HERC1-214ENST00000561400 PROK1P58294 105 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 Q0VG73 95 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 TMEM116Q8NCL8 245 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 WIPF2Q8TF74 440 aaPredicted RBP9.07□□□□□ -0.96
HERC1-214ENST00000561400 SH3BGRL3Q9H299 93 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 PLEKHA3Q9HB20 300 aa9.07□□□□□ -0.96
HERC1-214ENST00000561400 TMEM89A2RUT3 159 aa9.06□□□□□ -0.96
HERC1-214ENST00000561400 CEBPZOSA8MTT3 80 aa9.06□□□□□ -0.96
HERC1-214ENST00000561400 HAX1O00165 279 aa9.06□□□□□ -0.96
HERC1-214ENST00000561400 C3orf79P0CE67 100 aa9.06□□□□□ -0.96
HERC1-214ENST00000561400 PMCHP20382 165 aa9.06□□□□□ -0.96
HERC1-214ENST00000561400 ADMP35318 185 aa9.06□□□□□ -0.96
HERC1-214ENST00000561400 INS-IGF2F8WCM5 200 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 SYNGR2O43760 224 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 CA1P00915 261 aaPredicted RBP9.05□□□□□ -0.96
HERC1-214ENST00000561400 NTF3P20783 257 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 TCL1AP56279 114 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 FAM110DQ8TAY7 271 aaPredicted RBP9.05□□□□□ -0.96
HERC1-214ENST00000561400 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 RCL1Q9Y2P8 373 aaKnown RBP9.05□□□□□ -0.96
HERC1-214ENST00000561400 SELENOKQ9Y6D0 94 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 H3BUT2 72 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 IGLV1-40P01703 118 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 HBE1P02100 147 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 IAPPP10997 89 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 CRISP2P16562 243 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 ZFAND6Q6FIF0 208 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 Q6ZUT4 128 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 HEYLQ9NQ87 328 aaPredicted RBP9.05□□□□□ -0.96
HERC1-214ENST00000561400 STAB1Q9NY15 2570 aa9.05□□□□□ -0.96
HERC1-214ENST00000561400 A0A1W2PPM0 123 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 ORM1P02763 201 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 MFAP2P55001 183 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 ERHP84090 104 aaKnown RBP9.04□□□□□ -0.96
HERC1-214ENST00000561400 HIST2H2BDQ6DRA6 164 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 BAGE3Q86Y29 109 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 BAGE2Q86Y30 109 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 KLK15Q9H2R5 256 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 LSM5Q9Y4Y9 91 aaKnown RBP9.04□□□□□ -0.96
HERC1-214ENST00000561400 SSSCA1O60232 199 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 PSMB8P28062 276 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 SRIP30626 198 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 KRTAP10-3P60369 221 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 SLC35B1P78383 322 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 CYP2G1PQ6ZSU1 146 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 ATOH7Q8N100 152 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 TMEM158Q8WZ71 300 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 FANCD2OSQ96PS1 177 aa9.04□□□□□ -0.96
HERC1-214ENST00000561400 DEDDO75618 318 aa9.03□□□□□ -0.96
HERC1-214ENST00000561400 RNASE2P10153 161 aaKnown RBP9.03□□□□□ -0.96
HERC1-214ENST00000561400 RPL7P18124 248 aaKnown RBP9.03□□□□□ -0.96
HERC1-214ENST00000561400 TMEM97Q5BJF2 176 aa9.03□□□□□ -0.96
HERC1-214ENST00000561400 Q6AWC8 147 aa9.03□□□□□ -0.96
HERC1-214ENST00000561400 SLC25A34Q6PIV7 304 aa9.03□□□□□ -0.96
HERC1-214ENST00000561400 RBPMS2Q6ZRY4 209 aaKnown RBP9.03□□□□□ -0.96
HERC1-214ENST00000561400 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms