RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 KCNRGQ8N5I3 272 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 OR2G3Q8NGZ4 309 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 FAM167A-AS1Q96KT0 104 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 RSG1Q9BU20 258 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 SCRT1Q9BWW7 348 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 SMIM3Q9BZL3 60 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 RABAC1Q9UI14 185 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 PXMP4Q9Y6I8 212 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 AGRNO00468 2067 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 ARPC5O15511 151 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 HYPMO75409 117 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 CD5P06127 495 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 IGLC2P0DOY2 106 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 ORM2P19652 201 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 DEFA6Q01524 100 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 LGALSLQ3ZCW2 172 aaPredicted RBP4.35□□□□□ -1.71
LRRC28-220ENST00000561253 SPATA31B1PQ5VZV4 182 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 LEMD1Q68G75 181 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 TCF24Q7RTU0 167 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 OR10G7Q8NGN6 311 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 OR1B1Q8NGR6 318 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 DYNLRB2Q8TF09 96 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 PBDC1Q9BVG4 233 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 KRTAP17-1Q9BYP8 105 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 MFFQ9GZY8 342 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 ARL6Q9H0F7 186 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 WFDC10AQ9H1F0 79 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 MS4A6AQ9H2W1 248 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 DOK5Q9P104 306 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 HIGD1AQ9Y241 93 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 TIMM9Q9Y5J7 89 aa4.35□□□□□ -1.71
LRRC28-220ENST00000561253 TRAV8-2A0A0B4J237 113 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 TRAV5A0A0B4J249 113 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 H7C423 109 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 K7EQD1 137 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 ATP6V0CP27449 155 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 NUP62P37198 522 aaPredicted RBP4.34□□□□□ -1.71
LRRC28-220ENST00000561253 RAB31Q13636 194 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 LINC00305Q7Z4B0 112 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 AKAP14Q86UN6 197 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 C9orf62Q8N4C0 152 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 RPP25LQ8N5L8 163 aaKnown RBP4.34□□□□□ -1.71
LRRC28-220ENST00000561253 INO80EQ8NBZ0 244 aaPredicted RBP4.34□□□□□ -1.71
LRRC28-220ENST00000561253 PSMG3Q9BT73 122 aaPredicted RBP4.34□□□□□ -1.71
LRRC28-220ENST00000561253 SH3BGRL3Q9H299 93 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 TMEM231Q9H6L2 316 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 NRN1Q9NPD7 142 aa4.34□□□□□ -1.71
LRRC28-220ENST00000561253 ZMAT5Q9UDW3 170 aaKnown RBP4.34□□□□□ -1.71
LRRC28-220ENST00000561253 DNAH1Q9P2D7 4330 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 SACSQ9NZJ4 4579 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 RBMY1BA6NDE4 496 aaKnown RBP4.33□□□□□ -1.72
LRRC28-220ENST00000561253 RBMY1EA6NEQ0 496 aaKnown RBP4.33□□□□□ -1.72
LRRC28-220ENST00000561253 HELTA6NFD8 242 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 OR4C46A6NHA9 309 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 A8MTW9 85 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 H3BQ15 152 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 SLC17A3O00476 420 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 TAAR5O14804 337 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 IFNA5P01569 189 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 GIG44P09565 113 aaPredicted RBP4.33□□□□□ -1.72
LRRC28-220ENST00000561253 RBMY1DP0C7P1 496 aaKnown RBP4.33□□□□□ -1.72
LRRC28-220ENST00000561253 BMI1P35226 326 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 AP2S1P53680 142 aaPredicted RBP4.33□□□□□ -1.72
LRRC28-220ENST00000561253 RAB2AP61019 212 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 ZNF266Q14584 549 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 ZNF726P1Q15940 193 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 GUCA2BQ16661 112 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 SSX7Q7RTT5 188 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 HSD17B11Q8NBQ5 300 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 STOML3Q8TAV4 291 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 GPR82Q96P67 336 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 PFDN5Q99471 154 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 SLC25A2Q9BXI2 301 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 TMEM14CQ9P0S9 112 aa4.33□□□□□ -1.72
LRRC28-220ENST00000561253 KMT2CQ8NEZ4 4911 aaKnown RBP4.33□□□□□ -1.72
LRRC28-220ENST00000561253 IGKV3-7A0A075B6H7 116 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 A0A0D9SG52 128 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 OR11H12B2RN74 326 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 ISLRO14498 428 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 BCL2L11O43521 198 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 COX7A2P2O60397 106 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 EIF3GO75821 320 aaKnown RBP eCLIP4.32□□□□□ -1.72
LRRC28-220ENST00000561253 GAS8-AS1O95177 125 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 RPL7P18124 248 aaKnown RBP4.32□□□□□ -1.72
LRRC28-220ENST00000561253 M6PRP20645 277 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 DEFB1P60022 68 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 SERF2P84101 59 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 C10orf113Q5VZT2 155 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 Q6ZRG5 221 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 TMUB2Q71RG4 321 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 MIR17HGQ75NE6 70 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 OR8I2Q8N0Y5 310 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 DEFB125Q8N687 156 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 STXBP6Q8NFX7 210 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 OR1L4Q8NGR5 311 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 C11orf45Q8TAV5 145 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 SUN5Q8TC36 379 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 FXYD5Q96DB9 178 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 NARS2Q96I59 477 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms