RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 IGKV1-39P01597 117 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 IGKV1D-39P04432 117 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 CFAP161Q6P656 301 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 G3V4G9 280 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 PNRC1Q12796 327 aaPredicted RBP7.42□□□□□ -1.22
TRPM1-212ENST00000560801 UNQ9165/PRO28630Q6UXU0 137 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 C18orf65Q6ZTR6 163 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 MYOZ3Q8TDC0 251 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 MIEN1Q9BRT3 115 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 ARL2-SNX15V9GYD0 113 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 LOC389332A0A1B0GUA5 103 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 LGALS9O00182 355 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 RHODO00212 210 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 BTF3P20290 206 aaKnown RBP7.42□□□□□ -1.22
TRPM1-212ENST00000560801 VWC2Q2TAL6 325 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 TEX261Q6UWH6 196 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 PYGO2Q9BRQ0 406 aa7.42□□□□□ -1.22
TRPM1-212ENST00000560801 FNDC4Q9H6D8 234 aaPredicted RBP7.42□□□□□ -1.22
TRPM1-212ENST00000560801 SEPSECSQ9HD40 501 aaKnown RBP7.42□□□□□ -1.22
TRPM1-212ENST00000560801 GAGE12JA6NER3 117 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 TEX22C9J3V5 150 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 RPL35P42766 123 aaKnown RBP7.41□□□□□ -1.22
TRPM1-212ENST00000560801 GAGE1Q13065 139 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 GAGE4Q13068 117 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 GAGE5Q13069 117 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 COX19Q49B96 90 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 GAGE13Q4V321 117 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 IGHV3-16A0A0C4DH30 117 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 I3L2K1 104 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 SFTA3P0C7M3 94 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 PKIAP61925 76 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 TCEAL7Q9BRU2 100 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 IGHV4-30-4P0DP06 118 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 MRPL23Q16540 153 aaKnown RBP7.41□□□□□ -1.22
TRPM1-212ENST00000560801 C16orf74Q96GX8 76 aa7.41□□□□□ -1.22
TRPM1-212ENST00000560801 TNRC18O15417 2968 aaPredicted RBP7.41□□□□□ -1.22
TRPM1-212ENST00000560801 TAS2R60P59551 318 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 SPXQ9BT56 116 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 DEFB131BA0A096LNP1 70 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 Q9HAA7 133 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 ADARB2-AS1A8MUL3 147 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 H3BRN7 92 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 TCRAP04437 139 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 CRISP2P16562 243 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 UTF1Q5T230 341 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 ANAPC16Q96DE5 110 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 FANCD2OSQ96PS1 177 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 MAP6D1Q9H9H5 199 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 TOMM7Q9P0U1 55 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 TRAPPC1Q9Y5R8 145 aa7.4□□□□□ -1.22
TRPM1-212ENST00000560801 FRMD6-AS1P0C7T7 363 aa7.4□□□□□ -1.23
TRPM1-212ENST00000560801 HLA-DMBP28068 263 aa7.4□□□□□ -1.23
TRPM1-212ENST00000560801 CACNG7P62955 275 aa7.4□□□□□ -1.23
TRPM1-212ENST00000560801 C15orf53Q8NAA6 179 aa7.4□□□□□ -1.23
TRPM1-212ENST00000560801 MAP1LC3AQ9H492 121 aa7.4□□□□□ -1.23
TRPM1-212ENST00000560801 GSN-AS1Q9NRJ2 163 aa7.4□□□□□ -1.23
TRPM1-212ENST00000560801 YTHDF2Q9Y5A9 579 aaKnown RBP7.4□□□□□ -1.23
TRPM1-212ENST00000560801 ICOSQ9Y6W8 199 aa7.4□□□□□ -1.23
TRPM1-212ENST00000560801 ZNF114Q8NC26 417 aa7.39□□□□□ -1.23
TRPM1-212ENST00000560801 C8orf49Q96NF6 230 aa7.39□□□□□ -1.23
TRPM1-212ENST00000560801 C16orf54Q6UWD8 224 aa7.39□□□□□ -1.23
TRPM1-212ENST00000560801 ADAMTSL5Q6ZMM2 481 aa7.39□□□□□ -1.23
TRPM1-212ENST00000560801 TCAPO15273 167 aa7.39□□□□□ -1.23
TRPM1-212ENST00000560801 KLF5Q13887 457 aaPredicted RBP7.39□□□□□ -1.23
TRPM1-212ENST00000560801 SCO2A0A1W2PP80 73 aa7.39□□□□□ -1.23
TRPM1-212ENST00000560801 CRXO43186 299 aaPredicted RBP7.39□□□□□ -1.23
TRPM1-212ENST00000560801 IGKV1-17P01599 117 aa7.39□□□□□ -1.23
TRPM1-212ENST00000560801 PFN1P07737 140 aaKnown RBP7.39□□□□□ -1.23
TRPM1-212ENST00000560801 OR5AL1P0C617 328 aa7.39□□□□□ -1.23
TRPM1-212ENST00000560801 FHITP49789 147 aa7.39□□□□□ -1.23
TRPM1-212ENST00000560801 HERVK_113P61574 105 aa7.39□□□□□ -1.23
TRPM1-212ENST00000560801 SAV1Q9H4B6 383 aaPredicted RBP7.39□□□□□ -1.23
TRPM1-212ENST00000560801 RAB19A4D1S5 217 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 SSBP2P81877 361 aaPredicted RBP7.38□□□□□ -1.23
TRPM1-212ENST00000560801 Q6AWC8 147 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 ST20Q9HBF5 79 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 MRPL16Q9NX20 251 aaKnown RBP7.38□□□□□ -1.23
TRPM1-212ENST00000560801 ANAPC10Q9UM13 185 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 TRBV19A0A075B6N1 114 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 TRAV8-1A0A0A6YYK1 113 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 APCSP02743 223 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 A0A1B0GUT8 65 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 A8MWV9 139 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 PAX2Q02962 417 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 RNF152Q8N8N0 203 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 CCDC140Q96MF4 163 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 C2orf88Q9BSF0 95 aa7.38□□□□□ -1.23
TRPM1-212ENST00000560801 PLXNB1O43157 2135 aa7.37□□□□□ -1.23
TRPM1-212ENST00000560801 NACAE9PAV3 2078 aa7.37□□□□□ -1.23
TRPM1-212ENST00000560801 CPAMD8Q8IZJ3 1885 aa7.37□□□□□ -1.23
TRPM1-212ENST00000560801 BUB3O43684 328 aa7.37□□□□□ -1.23
TRPM1-212ENST00000560801 ZNF324O75467 553 aaPredicted RBP7.37□□□□□ -1.23
TRPM1-212ENST00000560801 STAG3L2P0CL84 134 aa7.37□□□□□ -1.23
TRPM1-212ENST00000560801 STAG3L3P0CL85 134 aa7.37□□□□□ -1.23
TRPM1-212ENST00000560801 U3KQE9 123 aa7.37□□□□□ -1.23
TRPM1-212ENST00000560801 TRAV10A0A0B4J240 114 aa7.37□□□□□ -1.23
TRPM1-212ENST00000560801 F2Z2F3 143 aa7.37□□□□□ -1.23
TRPM1-212ENST00000560801 ADMP35318 185 aa7.37□□□□□ -1.23
TRPM1-212ENST00000560801 IFITM3Q01628 133 aa7.37□□□□□ -1.23
TRPM1-212ENST00000560801 Q8N6K4 173 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms