RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 TMEM78Q5T7P6 136 aa5.8□□□□□ -1.48
LRRC28-219ENST00000560483 RPL7L1Q6DKI1 246 aaKnown RBP5.8□□□□□ -1.48
LRRC28-219ENST00000560483 ZNF767PQ75MW2 155 aa5.8□□□□□ -1.48
LRRC28-219ENST00000560483 RPP25LQ8N5L8 163 aaKnown RBP5.8□□□□□ -1.48
LRRC28-219ENST00000560483 GNPNAT1Q96EK6 184 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-219ENST00000560483 IGF2BP2-AS1Q96M15 143 aa5.8□□□□□ -1.48
LRRC28-219ENST00000560483 PARD6GQ9BYG4 376 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-219ENST00000560483 ACTR3CQ9C0K3 210 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-219ENST00000560483 SH3BGRL3Q9H299 93 aa5.8□□□□□ -1.48
LRRC28-219ENST00000560483 C11orf68Q9H3H3 251 aaKnown RBP5.8□□□□□ -1.48
LRRC28-219ENST00000560483 PRELID1Q9Y255 219 aa5.8□□□□□ -1.48
LRRC28-219ENST00000560483 KLK5Q9Y337 293 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-219ENST00000560483 LOC102723971A0A1B0GUV8 181 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 RNF222A6NCQ9 220 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 ZNF705EA8MWA4 302 aaPredicted RBP5.79□□□□□ -1.48
LRRC28-219ENST00000560483 TAAR5O14804 337 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 ZNF253O75346 499 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 HTN3P15516 51 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 ERCC8Q13216 396 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 PQLC2Q6ZP29 291 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 CCDC28AQ8IWP9 274 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 Q8NAQ8 132 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 CSNK1G2-AS1Q8NCQ2 148 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 PHLDA1Q8WV24 401 aaPredicted RBP5.79□□□□□ -1.48
LRRC28-219ENST00000560483 FXYD5Q96DB9 178 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 SAT2Q96F10 170 aaPredicted RBP5.79□□□□□ -1.48
LRRC28-219ENST00000560483 PHYHIPLQ96FC7 376 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 FAM167A-AS1Q96KT0 104 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 NIPSNAP3BQ9BS92 247 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 PSMG3Q9BT73 122 aaPredicted RBP5.79□□□□□ -1.48
LRRC28-219ENST00000560483 ZNF471Q9BX82 626 aaPredicted RBP5.79□□□□□ -1.48
LRRC28-219ENST00000560483 Q9H3A6 140 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 X6R8D5 127 aa5.79□□□□□ -1.48
LRRC28-219ENST00000560483 STARD9Q9P2P6 4700 aa5.78□□□□□ -1.48
LRRC28-219ENST00000560483 IGKV2-40A0A087WW87 121 aaPredicted RBP5.78□□□□□ -1.48
LRRC28-219ENST00000560483 TRAV12-3A0A0B4J271 114 aa5.78□□□□□ -1.48
LRRC28-219ENST00000560483 TMEM189A5PLL7 270 aa5.78□□□□□ -1.48
LRRC28-219ENST00000560483 SMIM9A6NGZ8 99 aa5.78□□□□□ -1.48
LRRC28-219ENST00000560483 ZNF705GA8MUZ8 300 aaPredicted RBP5.78□□□□□ -1.48
LRRC28-219ENST00000560483 NDUFB4O95168 129 aa5.78□□□□□ -1.48
LRRC28-219ENST00000560483 IGKV2D-40P01614 121 aaPredicted RBP5.78□□□□□ -1.48
LRRC28-219ENST00000560483 GPX1P07203 203 aa5.78□□□□□ -1.48
LRRC28-219ENST00000560483 SPART-AS1P0CW21 52 aa5.78□□□□□ -1.48
LRRC28-219ENST00000560483 RBMY1A1P0DJD3 496 aaKnown RBP5.78□□□□□ -1.48
LRRC28-219ENST00000560483 RBMY1CP0DJD4 496 aa5.78□□□□□ -1.48
LRRC28-219ENST00000560483 ARL14EPLP0DKL9 152 aa5.78□□□□□ -1.48
LRRC28-219ENST00000560483 RNASE4P34096 147 aaKnown RBP5.78□□□□□ -1.48
LRRC28-219ENST00000560483 SERF2P84101 59 aa5.78□□□□□ -1.48
LRRC28-219ENST00000560483 RBMY1FQ15415 496 aaKnown RBP5.78□□□□□ -1.48
LRRC28-219ENST00000560483 CLUHP3Q96NS8 147 aa5.78□□□□□ -1.48
LRRC28-219ENST00000560483 A0A0D9SG52 128 aa5.77□□□□□ -1.49
LRRC28-219ENST00000560483 PGPA6NDG6 321 aa5.77□□□□□ -1.49
LRRC28-219ENST00000560483 IGLL5B9A064 214 aa5.77□□□□□ -1.49
LRRC28-219ENST00000560483 CXorf1O96002 111 aa5.77□□□□□ -1.49
LRRC28-219ENST00000560483 SLC25A5P05141 298 aaKnown RBP5.77□□□□□ -1.49
LRRC28-219ENST00000560483 CEMP1Q6PRD7 247 aaPredicted RBP5.77□□□□□ -1.49
LRRC28-219ENST00000560483 AMTNQ6UX39 209 aa5.77□□□□□ -1.49
LRRC28-219ENST00000560483 ZNF705AQ6ZN79 300 aaPredicted RBP5.77□□□□□ -1.49
LRRC28-219ENST00000560483 C1orf158Q8N1D5 194 aa5.77□□□□□ -1.49
LRRC28-219ENST00000560483 TMEM256Q8N2U0 113 aa5.77□□□□□ -1.49
LRRC28-219ENST00000560483 RXFP4Q8TDU9 374 aa5.77□□□□□ -1.49
LRRC28-219ENST00000560483 C2CD4CQ8TF44 421 aa5.77□□□□□ -1.49
LRRC28-219ENST00000560483 RAB24Q969Q5 203 aa5.77□□□□□ -1.49
LRRC28-219ENST00000560483 MRPL53Q96EL3 112 aaKnown RBP5.77□□□□□ -1.49
LRRC28-219ENST00000560483 YTHDF2Q9Y5A9 579 aaKnown RBP5.77□□□□□ -1.49
LRRC28-219ENST00000560483 TRAV10A0A0B4J240 114 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 TEX48A0A1B0GUV7 120 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 A0A1B0GV50 99 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 CBY3A6NI87 242 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 H7BYZ3 331 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 K7EQM0 130 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 RGS13O14921 159 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 LY6G6CO95867 125 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 PRM2P04554 102 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 CT45A10P0DMU9 189 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 DEFB130BP0DP73 79 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 DEFB130AP0DP74 79 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 GCHFRP30047 84 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 FGF8P55075 233 aaPredicted RBP5.76□□□□□ -1.49
LRRC28-219ENST00000560483 UBE2G2P60604 165 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 DAD1P61803 113 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 EIF5AP63241 154 aaKnown RBP5.76□□□□□ -1.49
LRRC28-219ENST00000560483 FAM222AQ5U5X8 452 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 GFI1BQ5VTD9 330 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 Q6ZTC4 211 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 GOLT1AQ6ZVE7 132 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 AKAP14Q86UN6 197 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 LYPD1Q8N2G4 141 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 Q8TAT8 98 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 STOML3Q8TAV4 291 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 ZNF503Q96F45 646 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 LINC00477Q96M19 166 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 NEU1Q99519 415 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 VGLL1Q99990 258 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 OTORQ9NRC9 128 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 TMEM167BQ9NRX6 74 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 NAGKQ9UJ70 344 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 CELA1Q9UNI1 258 aa5.76□□□□□ -1.49
LRRC28-219ENST00000560483 DEFB131BA0A096LNP1 70 aa5.75□□□□□ -1.49
LRRC28-219ENST00000560483 CTXND1A0A1B0GTU2 59 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms