RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 RCHY1Q96PM5 261 aa10.31□□□□□ -0.76
PKNOX1-209ENST00000560448 C1QTNF4Q9BXJ3 329 aa10.31□□□□□ -0.76
PKNOX1-209ENST00000560448 SAV1Q9H4B6 383 aaPredicted RBP10.31□□□□□ -0.76
PKNOX1-209ENST00000560448 HLA-DRB4X5D2U9 266 aa10.31□□□□□ -0.76
PKNOX1-209ENST00000560448 ZNF674Q2M3X9 581 aa10.3□□□□□ -0.76
PKNOX1-209ENST00000560448 ACTL10Q5JWF8 245 aa10.3□□□□□ -0.76
PKNOX1-209ENST00000560448 FXYD5Q96DB9 178 aa10.3□□□□□ -0.76
PKNOX1-209ENST00000560448 YPEL4Q96NS1 127 aa10.3□□□□□ -0.76
PKNOX1-209ENST00000560448 PAXXQ9BUH6 204 aa10.3□□□□□ -0.76
PKNOX1-209ENST00000560448 OR51M1Q9H341 326 aa10.3□□□□□ -0.76
PKNOX1-209ENST00000560448 DNAH9Q9NYC9 4486 aa10.29□□□□□ -0.76
PKNOX1-209ENST00000560448 SCO2A0A1W2PP80 73 aa10.29□□□□□ -0.76
PKNOX1-209ENST00000560448 H3BMM0 161 aa10.29□□□□□ -0.76
PKNOX1-209ENST00000560448 NDUFB4O95168 129 aa10.29□□□□□ -0.76
PKNOX1-209ENST00000560448 OR10J4P0C629 311 aa10.29□□□□□ -0.76
PKNOX1-209ENST00000560448 PYYP10082 97 aa10.29□□□□□ -0.76
PKNOX1-209ENST00000560448 HIST1H1EP10412 219 aaKnown RBP10.29□□□□□ -0.76
PKNOX1-209ENST00000560448 RPL23P62829 140 aaKnown RBP10.29□□□□□ -0.76
PKNOX1-209ENST00000560448 C15orf54Q8N8G6 183 aa10.29□□□□□ -0.76
PKNOX1-209ENST00000560448 C17orf77Q96MU5 243 aa10.29□□□□□ -0.76
PKNOX1-209ENST00000560448 ZNF331Q9NQX6 463 aaPredicted RBP10.29□□□□□ -0.76
PKNOX1-209ENST00000560448 GGTLC3B5MD39 225 aa10.28□□□□□ -0.76
PKNOX1-209ENST00000560448 DUSP14O95147 198 aaKnown RBP10.28□□□□□ -0.76
PKNOX1-209ENST00000560448 RPL35AP18077 110 aaKnown RBP10.28□□□□□ -0.76
PKNOX1-209ENST00000560448 UBE2L3P68036 154 aaKnown RBP10.28□□□□□ -0.76
PKNOX1-209ENST00000560448 PSG9Q00887 426 aa10.28□□□□□ -0.76
PKNOX1-209ENST00000560448 ZNF124Q15973 351 aa10.28□□□□□ -0.76
PKNOX1-209ENST00000560448 MRPL53Q96EL3 112 aaKnown RBP10.28□□□□□ -0.76
PKNOX1-209ENST00000560448 DERL1Q9BUN8 251 aa10.28□□□□□ -0.76
PKNOX1-209ENST00000560448 PSG3Q16557 428 aa10.27□□□□□ -0.77
PKNOX1-209ENST00000560448 RNF183Q96D59 192 aa10.27□□□□□ -0.77
PKNOX1-209ENST00000560448 WWC2-AS2Q96NR7 200 aa10.27□□□□□ -0.77
PKNOX1-209ENST00000560448 TMEM242Q9NWH2 141 aa10.27□□□□□ -0.77
PKNOX1-209ENST00000560448 PRELID1Q9Y255 219 aa10.27□□□□□ -0.77
PKNOX1-209ENST00000560448 TGP01266 2768 aa10.27□□□□□ -0.77
PKNOX1-209ENST00000560448 TRBV20OR9-2A0A075B6H5 130 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 TRBV19A0A075B6N1 114 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 TRAV8-2A0A0B4J237 113 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 A0A0J9YX75 114 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 CXorf65A6NEN9 183 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 KNCNA6PVL3 124 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 A8MTW9 85 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 SPRY2O43597 315 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 CA1P00915 261 aaPredicted RBP10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 LYPD1Q8N2G4 141 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 ZNF738Q8NE65 137 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 HIST1H2BAQ96A08 127 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 ISOC2Q96AB3 205 aa10.26□□□□□ -0.77
PKNOX1-209ENST00000560448 AMBPP02760 352 aa10.25□□□□□ -0.77
PKNOX1-209ENST00000560448 SUMO1P63165 101 aaKnown RBP10.25□□□□□ -0.77
PKNOX1-209ENST00000560448 ADIRFQ15847 76 aa10.25□□□□□ -0.77
PKNOX1-209ENST00000560448 RNF212Q495C1 297 aa10.25□□□□□ -0.77
PKNOX1-209ENST00000560448 LINC01551Q86U37 167 aa10.25□□□□□ -0.77
PKNOX1-209ENST00000560448 C2CD4CQ8TF44 421 aa10.25□□□□□ -0.77
PKNOX1-209ENST00000560448 OVOL2Q9BRP0 275 aa10.25□□□□□ -0.77
PKNOX1-209ENST00000560448 CTDSP1Q9GZU7 261 aa10.25□□□□□ -0.77
PKNOX1-209ENST00000560448 AAMDCQ9H7C9 122 aa10.25□□□□□ -0.77
PKNOX1-209ENST00000560448 ZNF586Q9NXT0 402 aa10.25□□□□□ -0.77
PKNOX1-209ENST00000560448 C9JCJ5 164 aa10.24□□□□□ -0.77
PKNOX1-209ENST00000560448 MT-ND4LP03901 98 aa10.24□□□□□ -0.77
PKNOX1-209ENST00000560448 NBEAP1P0C6P0 100 aa10.24□□□□□ -0.77
PKNOX1-209ENST00000560448 DEFB135Q30KP9 77 aa10.24□□□□□ -0.77
PKNOX1-209ENST00000560448 C20orf173Q96LM9 149 aa10.24□□□□□ -0.77
PKNOX1-209ENST00000560448 LY96Q9Y6Y9 160 aa10.24□□□□□ -0.77
PKNOX1-209ENST00000560448 TCEAL7Q9BRU2 100 aa10.24□□□□□ -0.77
PKNOX1-209ENST00000560448 RPL35P42766 123 aaKnown RBP10.23□□□□□ -0.77
PKNOX1-209ENST00000560448 ELOBQ15370 118 aa10.23□□□□□ -0.77
PKNOX1-209ENST00000560448 GDF5OSQ5U4N7 250 aa10.23□□□□□ -0.77
PKNOX1-209ENST00000560448 RNF182Q8N6D2 247 aa10.23□□□□□ -0.77
PKNOX1-209ENST00000560448 OR4B1Q8NGF8 309 aa10.23□□□□□ -0.77
PKNOX1-209ENST00000560448 OR8A1Q8NGG7 326 aa10.23□□□□□ -0.77
PKNOX1-209ENST00000560448 IL17DQ8TAD2 202 aa10.23□□□□□ -0.77
PKNOX1-209ENST00000560448 OCC1Q8TAD7 63 aa10.23□□□□□ -0.77
PKNOX1-209ENST00000560448 COL7A1Q02388 2944 aa10.22□□□□□ -0.77
PKNOX1-209ENST00000560448 PGPEP1LA6NFU8 196 aa10.22□□□□□ -0.77
PKNOX1-209ENST00000560448 SLC17A3O00476 420 aa10.22□□□□□ -0.77
PKNOX1-209ENST00000560448 CNN1P51911 297 aaKnown RBP10.22□□□□□ -0.77
PKNOX1-209ENST00000560448 ARL6IP6Q8N6S5 226 aa10.22□□□□□ -0.77
PKNOX1-209ENST00000560448 OR10J6PQ8NGY7 276 aa10.22□□□□□ -0.77
PKNOX1-209ENST00000560448 ANAPC16Q96DE5 110 aa10.22□□□□□ -0.77
PKNOX1-209ENST00000560448 AGRNO00468 2067 aa10.21□□□□□ -0.77
PKNOX1-209ENST00000560448 HUWE1Q7Z6Z7 4374 aaKnown RBP10.21□□□□□ -0.77
PKNOX1-209ENST00000560448 LOC105371267A0A1B0GV96 52 aa10.21□□□□□ -0.78
PKNOX1-209ENST00000560448 PFN1P07737 140 aaKnown RBP10.21□□□□□ -0.78
PKNOX1-209ENST00000560448 GIG44P09565 113 aaPredicted RBP10.21□□□□□ -0.78
PKNOX1-209ENST00000560448 RAB5AP20339 215 aa10.21□□□□□ -0.78
PKNOX1-209ENST00000560448 RANP62826 216 aaKnown RBP10.21□□□□□ -0.78
PKNOX1-209ENST00000560448 BLNKQ8WV28 456 aa10.21□□□□□ -0.78
PKNOX1-209ENST00000560448 IGF2BP2-AS1Q96M15 143 aa10.21□□□□□ -0.78
PKNOX1-209ENST00000560448 ODF3Q96PU9 254 aa10.21□□□□□ -0.78
PKNOX1-209ENST00000560448 EDA2RQ9HAV5 297 aa10.21□□□□□ -0.78
PKNOX1-209ENST00000560448 PGPA6NDG6 321 aa10.2□□□□□ -0.78
PKNOX1-209ENST00000560448 F6UB75 175 aa10.2□□□□□ -0.78
PKNOX1-209ENST00000560448 K7EN84 100 aa10.2□□□□□ -0.78
PKNOX1-209ENST00000560448 PEX7O00628 323 aa10.2□□□□□ -0.78
PKNOX1-209ENST00000560448 IGLV2-8P01709 118 aa10.2□□□□□ -0.78
PKNOX1-209ENST00000560448 SNRPCP09234 159 aaKnown RBP10.2□□□□□ -0.78
PKNOX1-209ENST00000560448 CXCL1P09341 107 aa10.2□□□□□ -0.78
PKNOX1-209ENST00000560448 MIFP14174 115 aa10.2□□□□□ -0.78
PKNOX1-209ENST00000560448 TSPOP30536 169 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms