RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 M0R143 59 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 IGLV1-40P01703 118 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 PPBPP02775 128 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 IGHV4-38-2P0DP08 117 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 ZNF138P52744 262 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 TMEM78Q5T7P6 136 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 FAM104BQ5XKR9 115 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 TMEM219Q86XT9 240 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 FER1L6-AS1Q8NA97 138 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 WFDC12Q8WWY7 111 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 URB1-AS1Q96HZ7 61 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 TMEM70Q9BUB7 260 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 NPFFR1Q9GZQ6 430 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 HSPB8Q9UJY1 196 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 K7EMT4 169 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 OVOL1O14753 267 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 LEPROTL1O95214 131 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 COX6B1P14854 86 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 CFHR3Q02985 330 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 LOXL1Q08397 574 aaPredicted RBP7.45□□□□□ -1.22
RTF1-206ENST00000560447 LYZL1Q6UWQ5 148 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 PET117Q6UWS5 81 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 BRD3OSQ6XYD6 125 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 LRRC75A-AS1Q8N1F1 130 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 LINC00477Q96M19 166 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 VGLL1Q99990 258 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 TMEM191AQ9H0A3 160 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 UQCR10Q9UDW1 63 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 DOPEY1Q5JWR5 2465 aa7.45□□□□□ -1.22
RTF1-206ENST00000560447 TRAV9-2A0A087WT02 112 aa7.44□□□□□ -1.22
RTF1-206ENST00000560447 TRAV8-2A0A0B4J237 113 aa7.44□□□□□ -1.22
RTF1-206ENST00000560447 IGHV1-24A0A0C4DH33 117 aa7.44□□□□□ -1.22
RTF1-206ENST00000560447 SPATA12Q7Z6I5 190 aa7.44□□□□□ -1.22
RTF1-206ENST00000560447 ORMDL3Q8N138 153 aa7.44□□□□□ -1.22
RTF1-206ENST00000560447 FAM19A2Q8N3H0 131 aa7.44□□□□□ -1.22
RTF1-206ENST00000560447 AP5S1Q9NUS5 200 aa7.44□□□□□ -1.22
RTF1-206ENST00000560447 BEX4Q9NWD9 120 aaPredicted RBP7.44□□□□□ -1.22
RTF1-206ENST00000560447 RNF114Q9Y508 228 aa7.44□□□□□ -1.22
RTF1-206ENST00000560447 TACC2O95359 2948 aa7.44□□□□□ -1.22
RTF1-206ENST00000560447 A0A096LNT2 108 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 CACNG7P62955 275 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 FOXE3Q13461 319 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 SPATA45Q537H7 98 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 EBLN2Q6P2I7 272 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 FA2HQ7L5A8 372 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 OR10AG1Q8NH19 301 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 C16orf92Q96LL3 132 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 PSMG3-AS1Q96PY0 264 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 MAP1LC3CQ9BXW4 147 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 AGPAT4-IT1Q9H0P7 198 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 ZMAT5Q9UDW3 170 aaKnown RBP7.43□□□□□ -1.22
RTF1-206ENST00000560447 PAM16Q9Y3D7 125 aa7.43□□□□□ -1.22
RTF1-206ENST00000560447 IGHV4-4A0A075B6R2 117 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 IGHV3OR16-10A0A075B7F0 116 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 IGHV3-35A0A0C4DH35 117 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 SYS1-DBNDD2H3BUS1 97 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 IGLC3P0DOY3 106 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 MED14OSP0DP75 135 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 HLA-DMBP28068 263 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 ZNF80P51504 273 aaPredicted RBP7.42□□□□□ -1.22
RTF1-206ENST00000560447 SSTP61278 116 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 PSMG4Q5JS54 123 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 Q71RC1 249 aaPredicted RBP7.42□□□□□ -1.22
RTF1-206ENST00000560447 GPHB5Q86YW7 130 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 PRSS3P2Q8NHM4 247 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 PRELID3AQ96N28 172 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 ST20Q9HBF5 79 aa7.42□□□□□ -1.22
RTF1-206ENST00000560447 CACNA1BQ00975 2339 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 IGHV7-4-1A0A0J9YVY3 117 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 LINC01546A6NGU7 62 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 PRAC2D3DTV9 90 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 SOCS3O14543 225 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 SNAI2O43623 268 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 FSHBP01225 129 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 GHRHP01286 108 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 ORM1P02763 201 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 PF4V1P10720 104 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 LY6EQ16553 131 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 FAM106AQ4KMX7 169 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 ZNF705AQ6ZN79 300 aaPredicted RBP7.41□□□□□ -1.22
RTF1-206ENST00000560447 Q6ZS46 218 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 SMIM15Q7Z3B0 74 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 APRG1Q8IVJ8 170 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 DEFB125Q8N687 156 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 TEX29Q8N6K0 151 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 OR4X2Q8NGF9 303 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 OR10J6PQ8NGY7 276 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 Q8TAT8 98 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 MS4A6AQ9H2W1 248 aa7.41□□□□□ -1.22
RTF1-206ENST00000560447 DAZ1Q9NQZ3 744 aaKnown RBP7.41□□□□□ -1.22
RTF1-206ENST00000560447 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.4□□□□□ -1.222e-7■■■■■ 27.8
RTF1-206ENST00000560447 D6R8Y8 96 aa7.4□□□□□ -1.22
RTF1-206ENST00000560447 CKS2P33552 79 aa7.4□□□□□ -1.22
RTF1-206ENST00000560447 ERCC8Q13216 396 aa7.4□□□□□ -1.22
RTF1-206ENST00000560447 TWIST1Q15672 202 aa7.4□□□□□ -1.22
RTF1-206ENST00000560447 TDRG1Q3Y452 100 aa7.4□□□□□ -1.22
RTF1-206ENST00000560447 MRPL51Q4U2R6 128 aaKnown RBP7.4□□□□□ -1.22
RTF1-206ENST00000560447 IL17RELQ6ZVW7 336 aa7.4□□□□□ -1.22
RTF1-206ENST00000560447 RNF182Q8N6D2 247 aa7.4□□□□□ -1.22
RTF1-206ENST00000560447 DPF1Q92782 380 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 248.1 ms