RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 TMEM89A2RUT3 159 aa8.24□□□□□ -1.09
SNRPA1-211ENST00000560433 ZNF80P51504 273 aaPredicted RBP8.24□□□□□ -1.09
SNRPA1-211ENST00000560433 NDUFA6P56556 154 aa8.24□□□□□ -1.09
SNRPA1-211ENST00000560433 LINC01006Q8NI28 216 aa8.24□□□□□ -1.09
SNRPA1-211ENST00000560433 NEU1Q99519 415 aa8.24□□□□□ -1.09
SNRPA1-211ENST00000560433 JMJD1CQ15652 2540 aa8.24□□□□□ -1.09
SNRPA1-211ENST00000560433 A0A1W2PS18 150 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 C19orf71A6NCJ1 209 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 HIGD1CA8MV81 97 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 S100A9P06702 114 aaKnown RBP8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 PDZD11Q5EBL8 140 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 ZNF418Q8TF45 676 aaPredicted RBP8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 WFDC12Q8WWY7 111 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 GRAMD2BQ96HH9 432 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 PRR25Q96S07 402 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 SLC50A1Q9BRV3 221 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 PHOX2AO14813 284 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 ZNF253O75346 499 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 RAB4BP61018 213 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 GFI1BQ5VTD9 330 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 FAM231DQ6ZW35 169 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 RNF152Q8N8N0 203 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 ZNF738Q8NE65 137 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 NUP35Q8NFH5 326 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 GTSF1Q8WW33 167 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 AGPAT4-IT1Q9H0P7 198 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 TRAPPC1Q9Y5R8 145 aa8.23□□□□□ -1.09
SNRPA1-211ENST00000560433 F8P00451 2351 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 MUC21A0A0G2JKD1 596 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 MUC21A0A140T8X8 626 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 SMIM27A0A1W2PRY6 76 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 RNASE1P07998 156 aaKnown RBP8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 HILS1P60008 231 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 MUC21Q5SSG8 566 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 OR2D3Q8NGH3 330 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 TPPP3Q9BW30 176 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 RPP21Q9H633 154 aaKnown RBP8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 NRN1Q9NPD7 142 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 ZFP30Q9Y2G7 519 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 UFC1Q9Y3C8 167 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 C2CD3Q4AC94 2353 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 AGRNO00468 2067 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 SOCS3O14543 225 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 FOSL1P15407 271 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 CDX1P47902 265 aaPredicted RBP8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 KIAA1644Q3SXP7 199 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 BTF3L4Q96K17 158 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 PGLYRP4Q96LB8 373 aa8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 CITED2Q99967 270 aaPredicted RBP8.22□□□□□ -1.09
SNRPA1-211ENST00000560433 A0A1B0GUS0 222 aa8.21□□□□□ -1.09
SNRPA1-211ENST00000560433 SNURFLB1AK76 121 aa8.21□□□□□ -1.09
SNRPA1-211ENST00000560433 CD33P20138 364 aa8.21□□□□□ -1.09
SNRPA1-211ENST00000560433 CAMPP49913 170 aa8.21□□□□□ -1.09
SNRPA1-211ENST00000560433 ADAMTSL5Q6ZMM2 481 aa8.21□□□□□ -1.09
SNRPA1-211ENST00000560433 DPF1Q92782 380 aa8.21□□□□□ -1.09
SNRPA1-211ENST00000560433 DLX4Q92988 240 aaPredicted RBP8.21□□□□□ -1.09
SNRPA1-211ENST00000560433 TEP1Q99973 2627 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-211ENST00000560433 C2orf70A6NJV1 201 aa8.21□□□□□ -1.1
SNRPA1-211ENST00000560433 K7EMT4 169 aa8.21□□□□□ -1.1
SNRPA1-211ENST00000560433 AKR1D1P51857 326 aa8.21□□□□□ -1.1
SNRPA1-211ENST00000560433 ACTL10Q5JWF8 245 aa8.21□□□□□ -1.1
SNRPA1-211ENST00000560433 OR1N2Q8NGR9 330 aa8.21□□□□□ -1.1
SNRPA1-211ENST00000560433 TSKUQ8WUA8 353 aa8.21□□□□□ -1.1
SNRPA1-211ENST00000560433 SMIM12Q96EX1 92 aa8.21□□□□□ -1.1
SNRPA1-211ENST00000560433 SSBP4Q9BWG4 385 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-211ENST00000560433 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 LINC01619G3V211 115 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 SH2D1AO60880 128 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 TYMSP04818 313 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 CT45A10P0DMU9 189 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 KLF5Q13887 457 aaPredicted RBP8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 KIR3DS1Q14943 382 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 WIPF2Q8TF74 440 aaPredicted RBP8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 MS4A6AQ9H2W1 248 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 BIN3Q9NQY0 253 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 GRIFINA4D1Z8 144 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 ZNF688P0C7X2 276 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 GDF5OSQ5U4N7 250 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 DCANP1Q8TF63 244 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 C4orf3Q8WVX3 66 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 ZNF492Q9P255 531 aa8.2□□□□□ -1.1
SNRPA1-211ENST00000560433 TRBV6-1A0A0K0K1D8 114 aa8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 IZUMO1RA6ND01 250 aa8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 HIST1H1AQ02539 215 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 TMEM78Q5T7P6 136 aa8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 RAX2Q96IS3 184 aa8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 TMEM160Q9NX00 188 aa8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 NAT8BQ9UHF3 227 aa8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 TENM1Q9UKZ4 2725 aa8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 SERTM2A0A1B0GWG4 89 aa8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 IGKV3-20P01619 116 aa8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 PRR9Q5T870 116 aa8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 RNF114Q9Y508 228 aa8.19□□□□□ -1.1
SNRPA1-211ENST00000560433 A8MWL6 223 aa8.18□□□□□ -1.1
SNRPA1-211ENST00000560433 NPIPB6E9PJ23 425 aa8.18□□□□□ -1.1
SNRPA1-211ENST00000560433 PSMG4Q5JS54 123 aa8.18□□□□□ -1.1
SNRPA1-211ENST00000560433 SAPCD1Q5SSQ6 148 aa8.18□□□□□ -1.1
SNRPA1-211ENST00000560433 FAM162BQ5T6X4 162 aa8.18□□□□□ -1.1
SNRPA1-211ENST00000560433 TRRAPQ9Y4A5 3859 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms