RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 RPL27AP46776 148 aaKnown RBP4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 FAM106AQ4KMX7 169 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 ZC2HC1BQ5TFG8 222 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 TEX36Q5VZQ5 186 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 HIST2H2BCQ6DN03 193 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 HIST2H2BDQ6DRA6 164 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 SPINK14Q6IE38 97 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 SH2D6Q7Z4S9 175 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 TEN1Q86WV5 123 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 AMN1Q8IY45 258 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 TMEM178AQ8NBL3 297 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 ZNRF1Q8ND25 227 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 MDS2Q8NDY4 140 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 SHANK2-AS3Q9BTD1 123 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 AAMDCQ9H7C9 122 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 MRPL36Q9P0J6 103 aaKnown RBP4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 RNF7Q9UBF6 113 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 FREM1Q5H8C1 2179 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 IGLV2-18A0A075B6J9 118 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 IGLV3-9A0A075B6K5 115 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 IGHV1-18A0A0C4DH31 117 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 IGHV3-64DA0A0J9YX35 117 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 MYMXA0A1B0GTQ4 84 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 LINC01549A6NIU2 74 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 MRPS12O15235 138 aaKnown RBP4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 SH2D1AO60880 128 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 PRSS1P07477 247 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 ZNF688P0C7X2 276 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 CCL4P13236 92 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 SRD5A1P18405 259 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 WT1P19544 449 aaPredicted RBP4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 CRIP1P50238 77 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 UBE2D1P51668 147 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 UBE2D3P61077 147 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 UBE2D2P62837 147 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 MRPL23Q16540 153 aaKnown RBP4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 ZFAND6Q6FIF0 208 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 MORN3Q6PF18 240 aaPredicted RBP4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 MYOZ3Q8TDC0 251 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 LINC00476Q8WZB0 136 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 LEAP2Q969E1 77 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 RPEQ96AT9 228 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 RNF185Q96GF1 192 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 SGK494Q96LW2 274 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 BBC3Q96PG8 261 aaPredicted RBP4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 HIST1H4GQ99525 98 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 FOXC2Q99958 501 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 C20orf78Q9BR46 151 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 ANAPC13Q9BS18 74 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 SPANXDQ9BXN6 97 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 TNFRSF18Q9Y5U5 241 aa4.63□□□□□ -1.67
SNRPA1-209ENST00000560307 ASCC3Q8N3C0 2202 aaKnown RBP4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 IGHV3OR15-7A0A075B7D8 119 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 TRAV8-1A0A0A6YYK1 113 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 TMEM213A2RRL7 107 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 TMEM8BA6NDV4 472 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 F8VRH5 84 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 C16orf97H3BN30 126 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 H7C1H1 209 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 LYZL6O75951 148 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 IGHG3P01860 377 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 CRYGBP07316 175 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 GLRXP35754 106 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 LEPP41159 167 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 XGP55808 180 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 LYZP61626 148 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 ATP5G2Q06055 141 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 ADIPOQQ15848 244 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 PMS2CLQ68D20 193 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 PIP4P1Q86T03 277 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 GTSCR1Q86UQ5 136 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 ZNF575Q86XF7 245 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 TEX29Q8N6K0 151 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 RNF5Q99942 180 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 CITED1Q99966 193 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 RASL11BQ9BPW5 248 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 RAB1BQ9H0U4 201 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 SPRR3Q9UBC9 169 aa4.62□□□□□ -1.67
SNRPA1-209ENST00000560307 TRANK1O15050 2925 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 A8MWV9 139 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 E7EUB6 86 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 I3L2K1 104 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 TNFRSF13BO14836 293 aaPredicted RBP4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 MT-ATP8P03928 68 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 LAGE3Q14657 143 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 MRGPRG-AS1Q2M3A8 158 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 UTF1Q5T230 341 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 IL17RELQ6ZVW7 336 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 EXOC3-AS1Q8N2X6 119 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 HES7Q9BYE0 225 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 SPRY4Q9C004 299 aa4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 RALYQ9UKM9 306 aaKnown RBP4.61□□□□□ -1.67
SNRPA1-209ENST00000560307 TRAV40A0A0B4J280 105 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 CENPVL3A0A0U1RRI6 287 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 RBAKDNA6NC62 111 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 VCYO14598 125 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 RBP4P02753 201 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 CD59P13987 128 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 CXCL12P48061 93 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 INSL3P51460 131 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms