RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 OR11H2Q8NH07 326 aa8.8□□□□□ -1
RABGGTA-215ENST00000560207 XCL2Q9UBD3 114 aa8.8□□□□□ -1
RABGGTA-215ENST00000560207 GIG44P09565 113 aaPredicted RBP8.79□□□□□ -1
RABGGTA-215ENST00000560207 CRISP2P16562 243 aa8.79□□□□□ -1
RABGGTA-215ENST00000560207 ZNF705AQ6ZN79 300 aaPredicted RBP8.79□□□□□ -1
RABGGTA-215ENST00000560207 SSX7Q7RTT5 188 aa8.79□□□□□ -1
RABGGTA-215ENST00000560207 WWC2-AS2Q96NR7 200 aa8.79□□□□□ -1
RABGGTA-215ENST00000560207 ATG101Q9BSB4 218 aa8.79□□□□□ -1
RABGGTA-215ENST00000560207 NDFIP1Q9BT67 221 aa8.79□□□□□ -1
RABGGTA-215ENST00000560207 TMEM208Q9BTX3 173 aa8.79□□□□□ -1
RABGGTA-215ENST00000560207 AGPAT4-IT1Q9H0P7 198 aa8.79□□□□□ -1
RABGGTA-215ENST00000560207 SLC35B3Q9H1N7 401 aa8.79□□□□□ -1
RABGGTA-215ENST00000560207 C11orf68Q9H3H3 251 aaKnown RBP8.79□□□□□ -1
RABGGTA-215ENST00000560207 ZNF492Q9P255 531 aa8.79□□□□□ -1
RABGGTA-215ENST00000560207 EPDR1Q9UM22 224 aa8.79□□□□□ -1
RABGGTA-215ENST00000560207 COL7A1Q02388 2944 aa8.79□□□□□ -1
RABGGTA-215ENST00000560207 PRKDCP78527 4128 aaKnown RBP8.79□□□□□ -1
RABGGTA-215ENST00000560207 TEX48A0A1B0GUV7 120 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 FAM74A7A6NL05 159 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 PRAC2D3DTV9 90 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 H7BYZ3 331 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 IFNA7P01567 189 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 TCRAP04437 139 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 S100A9P06702 114 aaKnown RBP8.78□□□□□ -1
RABGGTA-215ENST00000560207 FGF8P55075 233 aaPredicted RBP8.78□□□□□ -1
RABGGTA-215ENST00000560207 DEFB1P60022 68 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 SPINK13Q1W4C9 94 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 SAPCD1Q5SSQ6 148 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 CYB561D1Q8N8Q1 229 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 NIPSNAP3BQ9BS92 247 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 NBEAL2Q6ZNJ1 2754 aa8.78□□□□□ -1
RABGGTA-215ENST00000560207 GPX1P07203 203 aa8.77□□□□□ -1.01
RABGGTA-215ENST00000560207 ZNF705DP0CH99 300 aaPredicted RBP8.77□□□□□ -1.01
RABGGTA-215ENST00000560207 ZNF705BP0CI00 300 aaPredicted RBP8.77□□□□□ -1.01
RABGGTA-215ENST00000560207 CT45A10P0DMU9 189 aa8.77□□□□□ -1.01
RABGGTA-215ENST00000560207 ZNF493Q6ZR52 646 aa8.77□□□□□ -1.01
RABGGTA-215ENST00000560207 TMEM75Q8N9X5 138 aa8.77□□□□□ -1.01
RABGGTA-215ENST00000560207 FAM19A4Q96LR4 140 aa8.77□□□□□ -1.01
RABGGTA-215ENST00000560207 PLA2G2EQ9NZK7 142 aa8.77□□□□□ -1.01
RABGGTA-215ENST00000560207 KLLNB2CW77 178 aa8.76□□□□□ -1.01
RABGGTA-215ENST00000560207 GGTLC3B5MD39 225 aa8.76□□□□□ -1.01
RABGGTA-215ENST00000560207 M0R2Z0 102 aa8.76□□□□□ -1.01
RABGGTA-215ENST00000560207 NKX2-5P52952 324 aaPredicted RBP8.76□□□□□ -1.01
RABGGTA-215ENST00000560207 TAS2R60P59551 318 aa8.76□□□□□ -1.01
RABGGTA-215ENST00000560207 RRN3P1Q2M238 152 aa8.76□□□□□ -1.01
RABGGTA-215ENST00000560207 CST9LP1Q5W188 147 aa8.76□□□□□ -1.01
RABGGTA-215ENST00000560207 GOLT1AQ6ZVE7 132 aa8.76□□□□□ -1.01
RABGGTA-215ENST00000560207 PYGO2Q9BRQ0 406 aa8.76□□□□□ -1.01
RABGGTA-215ENST00000560207 TMPRSS5Q9H3S3 457 aa8.76□□□□□ -1.01
RABGGTA-215ENST00000560207 IGKV2-40A0A087WW87 121 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 C7orf71A4D174 169 aa8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 CRXO43186 299 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 NDUFS6O75380 124 aaKnown RBP8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 EIF3GO75821 320 aaKnown RBP eCLIP8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 IGKV2D-40P01614 121 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 UBE2G2P60604 165 aa8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 ALKAL2Q6UX46 152 aa8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 CCDC28AQ8IWP9 274 aa8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 FMC1Q96HJ9 113 aa8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 VGLL1Q99990 258 aa8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 LINC00467Q9BRT7 94 aa8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 EDA2RQ9HAV5 297 aa8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 ZFP30Q9Y2G7 519 aa8.75□□□□□ -1.01
RABGGTA-215ENST00000560207 STAB2Q8WWQ8 2551 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 TRBV6-1A0A0K0K1D8 114 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 PEX7O00628 323 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 PDE6DO43924 150 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 PAGE4O60829 102 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 FXYD7P58549 80 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 UBE2G1P62253 170 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 FLI1Q01543 452 aaPredicted RBP8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 ERCC8Q13216 396 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 TEX261Q6UWH6 196 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 C1orf158Q8N1D5 194 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 LYPD6BQ8NI32 183 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 LINC01587Q99440 93 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 RETNQ9HD89 108 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 RPH3ALQ9UNE2 315 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 KLF12Q9Y4X4 402 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 YTHDF2Q9Y5A9 579 aaKnown RBP8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 X6R8D5 127 aa8.74□□□□□ -1.01
RABGGTA-215ENST00000560207 C11orf94C9JXX5 98 aa8.73□□□□□ -1.01
RABGGTA-215ENST00000560207 MEF2BQ02080 365 aaPredicted RBP8.73□□□□□ -1.01
RABGGTA-215ENST00000560207 GFI1BQ5VTD9 330 aa8.73□□□□□ -1.01
RABGGTA-215ENST00000560207 Q8NAQ8 132 aa8.73□□□□□ -1.01
RABGGTA-215ENST00000560207 ZNF680Q8NEM1 530 aa8.73□□□□□ -1.01
RABGGTA-215ENST00000560207 C16orf74Q96GX8 76 aa8.73□□□□□ -1.01
RABGGTA-215ENST00000560207 TREM1Q9NP99 234 aa8.73□□□□□ -1.01
RABGGTA-215ENST00000560207 GNG13Q9P2W3 67 aa8.73□□□□□ -1.01
RABGGTA-215ENST00000560207 VAX2Q9UIW0 290 aa8.73□□□□□ -1.01
RABGGTA-215ENST00000560207 PSG8Q9UQ74 426 aa8.73□□□□□ -1.01
RABGGTA-215ENST00000560207 TENM3Q9P273 2699 aa8.73□□□□□ -1.01
RABGGTA-215ENST00000560207 TRAV12-2A0A075B6T6 113 aa8.72□□□□□ -1.01
RABGGTA-215ENST00000560207 IGHV3OR16-12A0A075B7B8 117 aa8.72□□□□□ -1.01
RABGGTA-215ENST00000560207 TRAV21A0A0B4J279 112 aa8.72□□□□□ -1.01
RABGGTA-215ENST00000560207 SMUG1Q53HV7 270 aa8.72□□□□□ -1.01
RABGGTA-215ENST00000560207 Q6AWC8 147 aa8.72□□□□□ -1.01
RABGGTA-215ENST00000560207 ZFAND2AQ8N6M9 145 aa8.72□□□□□ -1.01
RABGGTA-215ENST00000560207 TMEM263Q8WUH6 116 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-215ENST00000560207 KCNS1Q96KK3 526 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms