RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 A0A1W2PPQ1 181 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 ZNF785A8K8V0 405 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 ADARB2-AS1A8MUL3 147 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 CCL24O00175 119 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 CHEK1O14757 476 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 PDE6DO43924 150 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 NDUFB4O95168 129 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 EDN2P20800 178 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 FHL3Q13643 280 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 OR2D3Q8NGH3 330 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 C2CD3Q4AC94 2353 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 TEP1Q99973 2627 aaKnown RBP8.53□□□□□ -1.04
USP3-218ENST00000560202 A0A087X0K7 114 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 PGPA6NDG6 321 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 F6UZH7 168 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 MYCNOSP40205 109 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 PDE6HQ13956 83 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 NSUN5P1Q3KNT7 163 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 SIGLEC15Q6ZMC9 328 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 ZNF705AQ6ZN79 300 aaPredicted RBP8.53□□□□□ -1.04
USP3-218ENST00000560202 NDUFA11Q86Y39 141 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 OR4B1Q8NGF8 309 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 ORAOV1Q8WV07 137 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 DLX4Q92988 240 aaPredicted RBP8.53□□□□□ -1.04
USP3-218ENST00000560202 ELOVL1Q9BW60 279 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 Q9H3A6 140 aa8.53□□□□□ -1.04
USP3-218ENST00000560202 C2orf70A6NJV1 201 aa8.52□□□□□ -1.05
USP3-218ENST00000560202 SLC17A3O00476 420 aa8.52□□□□□ -1.05
USP3-218ENST00000560202 CBLN1P23435 193 aa8.52□□□□□ -1.05
USP3-218ENST00000560202 BMI1P35226 326 aa8.52□□□□□ -1.05
USP3-218ENST00000560202 LYPD1Q8N2G4 141 aa8.52□□□□□ -1.05
USP3-218ENST00000560202 OR9G4Q8NGQ1 327 aa8.52□□□□□ -1.05
USP3-218ENST00000560202 OTORQ9NRC9 128 aa8.52□□□□□ -1.05
USP3-218ENST00000560202 PEMTQ9UBM1 199 aa8.52□□□□□ -1.05
USP3-218ENST00000560202 SETD2Q9BYW2 2564 aaPredicted RBP8.51□□□□□ -1.05
USP3-218ENST00000560202 SCO2A0A1W2PP80 73 aa8.51□□□□□ -1.05
USP3-218ENST00000560202 HELTA6NFD8 242 aa8.51□□□□□ -1.05
USP3-218ENST00000560202 ZNF705FA8MVS1 300 aaPredicted RBP8.51□□□□□ -1.05
USP3-218ENST00000560202 ZNF253O75346 499 aa8.51□□□□□ -1.05
USP3-218ENST00000560202 NPSP0C0P6 89 aa8.51□□□□□ -1.05
USP3-218ENST00000560202 ZNF705DP0CH99 300 aaPredicted RBP8.51□□□□□ -1.05
USP3-218ENST00000560202 ZNF705BP0CI00 300 aaPredicted RBP8.51□□□□□ -1.05
USP3-218ENST00000560202 KRTAP24-1Q3LI83 254 aa8.51□□□□□ -1.05
USP3-218ENST00000560202 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.51□□□□□ -1.05
USP3-218ENST00000560202 PRIMA1Q86XR5 153 aa8.51□□□□□ -1.05
USP3-218ENST00000560202 EXOC3-AS1Q8N2X6 119 aa8.51□□□□□ -1.05
USP3-218ENST00000560202 C11orf52Q96A22 123 aa8.51□□□□□ -1.05
USP3-218ENST00000560202 AURKAIP1Q9NWT8 199 aaPredicted RBP8.51□□□□□ -1.05
USP3-218ENST00000560202 TRAPPC1Q9Y5R8 145 aa8.51□□□□□ -1.05
USP3-218ENST00000560202 SLC25A5P05141 298 aaKnown RBP8.5□□□□□ -1.05
USP3-218ENST00000560202 RPL19P84098 196 aaKnown RBP8.5□□□□□ -1.05
USP3-218ENST00000560202 PSG9Q00887 426 aa8.5□□□□□ -1.05
USP3-218ENST00000560202 CMTM2Q8TAZ6 248 aa8.5□□□□□ -1.05
USP3-218ENST00000560202 RPUSD4Q96CM3 377 aaKnown RBP8.5□□□□□ -1.05
USP3-218ENST00000560202 VAMP8Q9BV40 100 aa8.5□□□□□ -1.05
USP3-218ENST00000560202 JMJD1CQ15652 2540 aa8.5□□□□□ -1.05
USP3-218ENST00000560202 K7EP13 123 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 M0QZ24 198 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 RPS20P60866 119 aaKnown RBP8.49□□□□□ -1.05
USP3-218ENST00000560202 RPL11P62913 178 aaKnown RBP8.49□□□□□ -1.05
USP3-218ENST00000560202 COX19Q49B96 90 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 ADAMTSL5Q6ZMM2 481 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 TCF24Q7RTU0 167 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 C5orf17Q8NAS9 161 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 PARLQ9H300 379 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 AAMDCQ9H7C9 122 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 ZNF331Q9NQX6 463 aaPredicted RBP8.49□□□□□ -1.05
USP3-218ENST00000560202 EPDR1Q9UM22 224 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 SELENOKQ9Y6D0 94 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 C20orf202A1L168 122 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 PEX7O00628 323 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 CSN3P07498 182 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 CDKN1BP46527 198 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 GNG5P63218 68 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 CITED1Q99966 193 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 SLC50A1Q9BRV3 221 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 DERL1Q9BUN8 251 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 NRN1Q9NPD7 142 aa8.49□□□□□ -1.05
USP3-218ENST00000560202 OVOL1O14753 267 aa8.48□□□□□ -1.05
USP3-218ENST00000560202 Q0VG73 95 aa8.48□□□□□ -1.05
USP3-218ENST00000560202 OR5I1Q13606 314 aa8.48□□□□□ -1.05
USP3-218ENST00000560202 DMRTA1Q5VZB9 504 aa8.48□□□□□ -1.05
USP3-218ENST00000560202 IGFL4Q6B9Z1 124 aa8.48□□□□□ -1.05
USP3-218ENST00000560202 UQCR10Q9UDW1 63 aa8.48□□□□□ -1.05
USP3-218ENST00000560202 IGKV3-7A0A075B6H7 116 aa8.47□□□□□ -1.05
USP3-218ENST00000560202 TRAV8-2A0A0B4J237 113 aa8.47□□□□□ -1.05
USP3-218ENST00000560202 M0R3E3 92 aa8.47□□□□□ -1.05
USP3-218ENST00000560202 TCRAP04437 139 aa8.47□□□□□ -1.05
USP3-218ENST00000560202 HLA-DMBP28068 263 aa8.47□□□□□ -1.05
USP3-218ENST00000560202 C16orf92Q96LL3 132 aa8.47□□□□□ -1.05
USP3-218ENST00000560202 RPH3ALQ9UNE2 315 aa8.47□□□□□ -1.05
USP3-218ENST00000560202 SOCS3O14543 225 aa8.46□□□□□ -1.05
USP3-218ENST00000560202 CSN1S1P47710 185 aa8.46□□□□□ -1.05
USP3-218ENST00000560202 RNF182Q8N6D2 247 aa8.46□□□□□ -1.05
USP3-218ENST00000560202 LINC00479Q96M42 142 aa8.46□□□□□ -1.05
USP3-218ENST00000560202 CLEC5AQ9NY25 188 aa8.46□□□□□ -1.05
USP3-218ENST00000560202 DIRC3C9JPN6 131 aa8.46□□□□□ -1.06
USP3-218ENST00000560202 C21orf62-AS1Q17RA5 79 aa8.46□□□□□ -1.06
USP3-218ENST00000560202 LCN12Q6JVE5 192 aa8.46□□□□□ -1.06
USP3-218ENST00000560202 DYNLRB2Q8TF09 96 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms