RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ERCC8Q13216 396 aa9.35□□□□□ -0.91
SMAD3-213ENST00000560175 ACOT6Q3I5F7 207 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-213ENST00000560175 KHDC3LQ587J8 217 aa9.35□□□□□ -0.91
SMAD3-213ENST00000560175 PQLC2Q6ZP29 291 aa9.35□□□□□ -0.91
SMAD3-213ENST00000560175 ARL6IP6Q8N6S5 226 aa9.35□□□□□ -0.91
SMAD3-213ENST00000560175 LINC00612Q8N6U2 182 aa9.35□□□□□ -0.91
SMAD3-213ENST00000560175 SUN5Q8TC36 379 aa9.35□□□□□ -0.91
SMAD3-213ENST00000560175 C16orf74Q96GX8 76 aa9.35□□□□□ -0.91
SMAD3-213ENST00000560175 ZNF492Q9P255 531 aa9.35□□□□□ -0.91
SMAD3-213ENST00000560175 TNFSF18Q9UNG2 199 aa9.35□□□□□ -0.91
SMAD3-213ENST00000560175 EPPK1P58107 5090 aaKnown RBP9.35□□□□□ -0.91
SMAD3-213ENST00000560175 OR7C2O60412 319 aa9.34□□□□□ -0.91
SMAD3-213ENST00000560175 DAD1P61803 113 aa9.34□□□□□ -0.91
SMAD3-213ENST00000560175 ZFAND2AQ8N6M9 145 aa9.34□□□□□ -0.91
SMAD3-213ENST00000560175 VGLL1Q99990 258 aa9.34□□□□□ -0.91
SMAD3-213ENST00000560175 PYGO2Q9BRQ0 406 aa9.34□□□□□ -0.91
SMAD3-213ENST00000560175 NDUFAF3Q9BU61 184 aa9.34□□□□□ -0.91
SMAD3-213ENST00000560175 TIMM8BQ9Y5J9 83 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-213ENST00000560175 TRAV12-3A0A0B4J271 114 aa9.33□□□□□ -0.92
SMAD3-213ENST00000560175 CBY3A6NI87 242 aa9.33□□□□□ -0.92
SMAD3-213ENST00000560175 ATP6V0CP27449 155 aa9.33□□□□□ -0.92
SMAD3-213ENST00000560175 RAB2AP61019 212 aa9.33□□□□□ -0.92
SMAD3-213ENST00000560175 RANP62826 216 aaKnown RBP9.33□□□□□ -0.92
SMAD3-213ENST00000560175 FAM122CQ6P4D5 195 aa9.33□□□□□ -0.92
SMAD3-213ENST00000560175 OR10G4Q8NGN3 311 aa9.33□□□□□ -0.92
SMAD3-213ENST00000560175 OR10G9Q8NGN4 311 aa9.33□□□□□ -0.92
SMAD3-213ENST00000560175 OR10G7Q8NGN6 311 aa9.33□□□□□ -0.92
SMAD3-213ENST00000560175 OR2T35Q8NGX2 323 aa9.33□□□□□ -0.92
SMAD3-213ENST00000560175 Q9H3A6 140 aa9.33□□□□□ -0.92
SMAD3-213ENST00000560175 IGKV2-40A0A087WW87 121 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-213ENST00000560175 C7orf71A4D174 169 aa9.32□□□□□ -0.92
SMAD3-213ENST00000560175 IGKV2D-40P01614 121 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-213ENST00000560175 STAG3L2P0CL84 134 aa9.32□□□□□ -0.92
SMAD3-213ENST00000560175 STAG3L3P0CL85 134 aa9.32□□□□□ -0.92
SMAD3-213ENST00000560175 UBE2L3P68036 154 aaKnown RBP9.32□□□□□ -0.92
SMAD3-213ENST00000560175 CD300CQ08708 224 aa9.32□□□□□ -0.92
SMAD3-213ENST00000560175 DAZ2Q13117 558 aaKnown RBP9.32□□□□□ -0.92
SMAD3-213ENST00000560175 INO80EQ8NBZ0 244 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-213ENST00000560175 RXFP4Q8TDU9 374 aa9.32□□□□□ -0.92
SMAD3-213ENST00000560175 TMED6Q8WW62 240 aa9.32□□□□□ -0.92
SMAD3-213ENST00000560175 LENEPQ9Y5L5 61 aa9.32□□□□□ -0.92
SMAD3-213ENST00000560175 A0A1W2PPV4 95 aa9.31□□□□□ -0.92
SMAD3-213ENST00000560175 DIRC3C9JPN6 131 aa9.31□□□□□ -0.92
SMAD3-213ENST00000560175 MBP02144 154 aa9.31□□□□□ -0.92
SMAD3-213ENST00000560175 ZNF138P52744 262 aa9.31□□□□□ -0.92
SMAD3-213ENST00000560175 ANXA2RQ3ZCQ2 193 aa9.31□□□□□ -0.92
SMAD3-213ENST00000560175 TMEM78Q5T7P6 136 aa9.31□□□□□ -0.92
SMAD3-213ENST00000560175 CCDC28AQ8IWP9 274 aa9.31□□□□□ -0.92
SMAD3-213ENST00000560175 HSD17B11Q8NBQ5 300 aa9.31□□□□□ -0.92
SMAD3-213ENST00000560175 OTORQ9NRC9 128 aa9.31□□□□□ -0.92
SMAD3-213ENST00000560175 EIF3GO75821 320 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMAD3-213ENST00000560175 P0DMU3 169 aa9.3□□□□□ -0.92
SMAD3-213ENST00000560175 FAM231AP0DMU4 169 aa9.3□□□□□ -0.92
SMAD3-213ENST00000560175 FAM231CP0DMU5 169 aa9.3□□□□□ -0.92
SMAD3-213ENST00000560175 HTN1P15515 57 aa9.3□□□□□ -0.92
SMAD3-213ENST00000560175 CSN1S1P47710 185 aa9.3□□□□□ -0.92
SMAD3-213ENST00000560175 BTN1A1Q13410 526 aa9.3□□□□□ -0.92
SMAD3-213ENST00000560175 PRR9Q5T870 116 aa9.3□□□□□ -0.92
SMAD3-213ENST00000560175 RPL7L1Q6DKI1 246 aaKnown RBP9.3□□□□□ -0.92
SMAD3-213ENST00000560175 C11orf72Q8NBR9 251 aa9.3□□□□□ -0.92
SMAD3-213ENST00000560175 RAB24Q969Q5 203 aa9.3□□□□□ -0.92
SMAD3-213ENST00000560175 GNPNAT1Q96EK6 184 aaPredicted RBP9.3□□□□□ -0.92
SMAD3-213ENST00000560175 C18orf15Q96N68 181 aa9.3□□□□□ -0.92
SMAD3-213ENST00000560175 NOP10Q9NPE3 64 aaKnown RBP9.3□□□□□ -0.92
SMAD3-213ENST00000560175 FXYD6-FXYD2A0A087WZ82 144 aa9.29□□□□□ -0.92
SMAD3-213ENST00000560175 PGPA6NDG6 321 aa9.29□□□□□ -0.92
SMAD3-213ENST00000560175 J3KRW8 73 aa9.29□□□□□ -0.92
SMAD3-213ENST00000560175 TAAR5O14804 337 aa9.29□□□□□ -0.92
SMAD3-213ENST00000560175 GPX1P07203 203 aa9.29□□□□□ -0.92
SMAD3-213ENST00000560175 DEFB130BP0DP73 79 aa9.29□□□□□ -0.92
SMAD3-213ENST00000560175 DEFB130AP0DP74 79 aa9.29□□□□□ -0.92
SMAD3-213ENST00000560175 RNASE4P34096 147 aaKnown RBP9.29□□□□□ -0.92
SMAD3-213ENST00000560175 CDC34P49427 236 aaPredicted RBP9.29□□□□□ -0.92
SMAD3-213ENST00000560175 POM121L12Q8N7R1 296 aa9.29□□□□□ -0.92
SMAD3-213ENST00000560175 SH3BGRL3Q9H299 93 aa9.29□□□□□ -0.92
SMAD3-213ENST00000560175 CYTL1Q9NRR1 136 aa9.29□□□□□ -0.92
SMAD3-213ENST00000560175 DNAH2Q9P225 4427 aa9.29□□□□□ -0.92
SMAD3-213ENST00000560175 NACAE9PAV3 2078 aa9.28□□□□□ -0.92
SMAD3-213ENST00000560175 ATP5G1P05496 136 aa9.28□□□□□ -0.92
SMAD3-213ENST00000560175 ARL14EPLP0DKL9 152 aa9.28□□□□□ -0.92
SMAD3-213ENST00000560175 ATP5G3P48201 142 aa9.28□□□□□ -0.92
SMAD3-213ENST00000560175 RNF212Q495C1 297 aa9.28□□□□□ -0.92
SMAD3-213ENST00000560175 Q6AWC8 147 aa9.28□□□□□ -0.92
SMAD3-213ENST00000560175 TMEM88Q6PEY1 159 aa9.28□□□□□ -0.92
SMAD3-213ENST00000560175 EIF4E3Q8N5X7 224 aaKnown RBP9.28□□□□□ -0.92
SMAD3-213ENST00000560175 C15orf53Q8NAA6 179 aa9.28□□□□□ -0.92
SMAD3-213ENST00000560175 BORCS7-ASMTA0A0B4J1R7 106 aa9.27□□□□□ -0.93
SMAD3-213ENST00000560175 HMGB3O15347 200 aaKnown RBP9.27□□□□□ -0.93
SMAD3-213ENST00000560175 GCHFRP30047 84 aa9.27□□□□□ -0.93
SMAD3-213ENST00000560175 FAM74A1Q5RGS3 127 aa9.27□□□□□ -0.93
SMAD3-213ENST00000560175 IBA57Q5T440 356 aaKnown RBP9.27□□□□□ -0.93
SMAD3-213ENST00000560175 Q6ZQT7 251 aa9.27□□□□□ -0.93
SMAD3-213ENST00000560175 ZNF680Q8NEM1 530 aa9.27□□□□□ -0.93
SMAD3-213ENST00000560175 ST6GAL2Q96JF0 529 aa9.27□□□□□ -0.93
SMAD3-213ENST00000560175 TP53TG3Q9ULZ0 132 aa9.27□□□□□ -0.93
SMAD3-213ENST00000560175 MUC4Q99102 2169 aa9.27□□□□□ -0.93
SMAD3-213ENST00000560175 DNAH17Q9UFH2 4485 aa9.27□□□□□ -0.93
SMAD3-213ENST00000560175 HMSDA8MTL9 139 aa9.26□□□□□ -0.93
SMAD3-213ENST00000560175 SNURFLB1AK76 121 aa9.26□□□□□ -0.93
SMAD3-213ENST00000560175 HTN3P15516 51 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms