RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 LEPP41159 167 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 CDKN1BP46527 198 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 FGF8P55075 233 aaPredicted RBP6.16□□□□□ -1.42
USP3-217ENST00000560070 GNG5P63218 68 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 CD300CQ08708 224 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 RRN3P1Q2M238 152 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 TMEM78Q5T7P6 136 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 ZNF705AQ6ZN79 300 aaPredicted RBP6.16□□□□□ -1.42
USP3-217ENST00000560070 PQLC2Q6ZP29 291 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 CMTM2Q8TAZ6 248 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 PHLDA1Q8WV24 401 aaPredicted RBP6.16□□□□□ -1.42
USP3-217ENST00000560070 LINC00477Q96M19 166 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 CELA1Q9UNI1 258 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 J3QL48 77 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 BCL2L11O43521 198 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 CXorf1O96002 111 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 SLC25A5P05141 298 aaKnown RBP6.15□□□□□ -1.42
USP3-217ENST00000560070 STAG3L2P0CL84 134 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 STAG3L3P0CL85 134 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 FHITP49789 147 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 UBE2G2P60604 165 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 SUMO1P63165 101 aaKnown RBP6.15□□□□□ -1.42
USP3-217ENST00000560070 ZNF726P1Q15940 193 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 LGALSLQ3ZCW2 172 aaPredicted RBP6.15□□□□□ -1.42
USP3-217ENST00000560070 GFI1BQ5VTD9 330 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 CEMP1Q6PRD7 247 aaPredicted RBP6.15□□□□□ -1.42
USP3-217ENST00000560070 GOLT1AQ6ZVE7 132 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 AKAP14Q86UN6 197 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 LYPD1Q8N2G4 141 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 Q8TAT8 98 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 MRPL53Q96EL3 112 aaKnown RBP6.15□□□□□ -1.42
USP3-217ENST00000560070 SGK494Q96LW2 274 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 NEU1Q99519 415 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 C11orf68Q9H3H3 251 aaKnown RBP6.15□□□□□ -1.42
USP3-217ENST00000560070 OTORQ9NRC9 128 aa6.15□□□□□ -1.42
USP3-217ENST00000560070 COL7A1Q02388 2944 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 SMIM9A6NGZ8 99 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 DIRC3C9JPN6 131 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 GPX1P07203 203 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 SPART-AS1P0CW21 52 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 ZNF138P52744 262 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 BTN1A1Q13410 526 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 C12orf74Q32Q52 190 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 FAM74A1Q5RGS3 127 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 Q6ZQT7 251 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 Q6ZTC4 211 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 TCTE3Q8IZS6 198 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 FAM213BQ8TBF2 198 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 RXFP4Q8TDU9 374 aa6.14□□□□□ -1.43
USP3-217ENST00000560070 YTHDF2Q9Y5A9 579 aaKnown RBP6.14□□□□□ -1.43
USP3-217ENST00000560070 CTXND1A0A1B0GTU2 59 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 IGLL5B9A064 214 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 DEFB130BP0DP73 79 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 DEFB130AP0DP74 79 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 HTN3P15516 51 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 TAS2R60P59551 318 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 ZNF345Q14585 488 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 FAM222AQ5U5X8 452 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 C9orf47Q6ZRZ4 202 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 CCDC28AQ8IWP9 274 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 TMED6Q8WW62 240 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 TMEM167BQ9NRX6 74 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 ZNF492Q9P255 531 aa6.13□□□□□ -1.43
USP3-217ENST00000560070 TRAV8-1A0A0A6YYK1 113 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 C7orf71A4D174 169 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 TMEM189A5PLL7 270 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 MAP1LC3B2A6NCE7 125 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 IFNA7P01567 189 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 C1QBP02746 253 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 SEC11BP0C7V7 166 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 TPT1P13693 172 aaKnown RBP6.12□□□□□ -1.43
USP3-217ENST00000560070 EIF5AP63241 154 aaKnown RBP6.12□□□□□ -1.43
USP3-217ENST00000560070 PRR9Q5T870 116 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 SFT2D1Q8WV19 159 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 FAM19A4Q96LR4 140 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 LINC00479Q96M42 142 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 NIPSNAP3BQ9BS92 247 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 MAP1LC3BQ9GZQ8 125 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 NOP10Q9NPE3 64 aaKnown RBP6.12□□□□□ -1.43
USP3-217ENST00000560070 EPDR1Q9UM22 224 aa6.12□□□□□ -1.43
USP3-217ENST00000560070 KLK5Q9Y337 293 aaPredicted RBP6.12□□□□□ -1.43
USP3-217ENST00000560070 TENM3Q9P273 2699 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 DEFB131BA0A096LNP1 70 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 TRAV34A0A0B4J273 112 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 RBAKDNA6NC62 111 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 NUPR2A6NF83 97 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 CBY3A6NI87 242 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 F6UZH7 168 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 H7BYZ3 331 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 ZNF324O75467 553 aaPredicted RBP6.11□□□□□ -1.43
USP3-217ENST00000560070 NKX2-5P52952 324 aaPredicted RBP6.11□□□□□ -1.43
USP3-217ENST00000560070 DAD1P61803 113 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 ZFP69Q49AA0 526 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 MUC21Q5SSG8 566 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 CST9LP1Q5W188 147 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 TMEM256Q8N2U0 113 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 ZFAND2AQ8N6M9 145 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 STOML3Q8TAV4 291 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 SUN5Q8TC36 379 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 ODF3Q96PU9 254 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 434.3 ms