RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 Q8TAT8 98 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 LRRC20Q8TCA0 184 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 FAM210AQ96ND0 272 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 GPR82Q96P67 336 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 VGLL1Q99990 258 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 EIF5A2Q9GZV4 153 aaKnown RBP3.87□□□□□ -1.79
SPG11-220ENST00000559933 MAP6D1Q9H9H5 199 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 TMEM167BQ9NRX6 74 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 ZNF256Q9Y2P7 627 aaPredicted RBP3.87□□□□□ -1.79
SPG11-220ENST00000559933 LINC00862A6NCI5 91 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 PGPEP1LA6NFU8 196 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 F6UZH7 168 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 J3KRW8 73 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 PEX7O00628 323 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 ISLRO14498 428 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 SRP19P09132 144 aaKnown RBP3.86□□□□□ -1.79
SPG11-220ENST00000559933 ADCYAP1P18509 176 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 BMI1P35226 326 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 PSMB3P49720 205 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 PPT1P50897 306 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 FXYD7P58549 80 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 HIST1H1AQ02539 215 aaPredicted RBP3.86□□□□□ -1.79
SPG11-220ENST00000559933 PSG3Q16557 428 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 BEAN1Q3B7T3 259 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 C9orf66Q5T8R8 295 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 LCN12Q6JVE5 192 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 Q6ZQT7 251 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 S100A7AQ86SG5 101 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 CCDC28AQ8IWP9 274 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 DEFB125Q8N687 156 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 CYB561D1Q8N8Q1 229 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 WFDC9Q8NEX5 89 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 RPUSD4Q96CM3 377 aaKnown RBP3.86□□□□□ -1.79
SPG11-220ENST00000559933 GPR61Q9BZJ8 451 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 TREM1Q9NP99 234 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 MANBALQ9NQG1 85 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 OTORQ9NRC9 128 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 SIGLEC8Q9NYZ4 499 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 VAX2Q9UIW0 290 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 AGRNO00468 2067 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 SORL1Q92673 2214 aa3.86□□□□□ -1.79
SPG11-220ENST00000559933 MGAM2Q2M2H8 2515 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 TRBV20OR9-2A0A075B6H5 130 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 A0A1W2PRE2 83 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 RAB19A4D1S5 217 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 ZNF253O75346 499 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 IFNA1P01562 189 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 IGLV2-11P01706 119 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 TCRAP04437 139 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 CD5P06127 495 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 SFTA3P0C7M3 94 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 S100A7P31151 101 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 AKR1C3P42330 323 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 MEF2BQ02080 365 aaPredicted RBP3.85□□□□□ -1.79
SPG11-220ENST00000559933 PDE6HQ13956 83 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 ACTL10Q5JWF8 245 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 PRR9Q5T870 116 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 Q86TA4 180 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 CLRN3Q8NCR9 226 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 C2CD4CQ8TF44 421 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 TVP23CQ96ET8 276 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 SPAG8Q99932 426 aaPredicted RBP3.85□□□□□ -1.79
SPG11-220ENST00000559933 SLC50A1Q9BRV3 221 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 EPDR1Q9UM22 224 aa3.85□□□□□ -1.79
SPG11-220ENST00000559933 TRAV12-2A0A075B6T6 113 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 TRAV25A0A0B4J276 109 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 A0A0J9YX75 114 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 OR4C46A6NHA9 309 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 M0R2Z0 102 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 CT45A10P0DMU9 189 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 RPL35AP18077 110 aaKnown RBP3.84□□□□□ -1.79
SPG11-220ENST00000559933 RPL35P42766 123 aaKnown RBP3.84□□□□□ -1.79
SPG11-220ENST00000559933 MEOX2P50222 304 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 CNN1P51911 297 aaKnown RBP3.84□□□□□ -1.79
SPG11-220ENST00000559933 PTTG1IPP53801 180 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 SNRPD3P62318 126 aaKnown RBP3.84□□□□□ -1.79
SPG11-220ENST00000559933 PAFAH1B2P68402 229 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 PSG9Q00887 426 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 CENPWQ5EE01 88 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 PRNTQ86SH4 94 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 C5orf17Q8NAS9 161 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 OR4B1Q8NGF8 309 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 OR8A1Q8NGG7 326 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 OR2K2Q8NGT1 345 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 CMTM2Q8TAZ6 248 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 C11orf52Q96A22 123 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 IGF2BP2-AS1Q96M15 143 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 ATG101Q9BSB4 218 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 MCRIP2Q9BUT9 160 aaKnown RBP3.84□□□□□ -1.79
SPG11-220ENST00000559933 AGPAT4-IT1Q9H0P7 198 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 SLC35B3Q9H1N7 401 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 PARLQ9H300 379 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 AAMDCQ9H7C9 122 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 MED9Q9NWA0 146 aa3.84□□□□□ -1.79
SPG11-220ENST00000559933 TMA7Q9Y2S6 64 aaKnown RBP3.84□□□□□ -1.79
SPG11-220ENST00000559933 TRAV2A0A0B4J234 112 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 OR11H12B2RN74 326 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 K7EN84 100 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 PRM2P04554 102 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms