RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 AGPAT4-IT1Q9H0P7 198 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 NOP10Q9NPE3 64 aaKnown RBP5.82□□□□□ -1.48
SNX1-207ENST00000559401 TIMM8BQ9Y5J9 83 aaPredicted RBP5.82□□□□□ -1.48
SNX1-207ENST00000559401 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 C7orf71A4D174 169 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 HMGB3O15347 200 aaKnown RBP5.81□□□□□ -1.48
SNX1-207ENST00000559401 SLC25A5P05141 298 aaKnown RBP5.81□□□□□ -1.48
SNX1-207ENST00000559401 ATP5G1P05496 136 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 GIPP09681 153 aaPredicted RBP5.81□□□□□ -1.48
SNX1-207ENST00000559401 M6PRP20645 277 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 RNASE4P34096 147 aaKnown RBP5.81□□□□□ -1.48
SNX1-207ENST00000559401 ATP5G3P48201 142 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 RAB2AP61019 212 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 BTN1A1Q13410 526 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 INO80EQ8NBZ0 244 aaPredicted RBP5.81□□□□□ -1.48
SNX1-207ENST00000559401 OR10G4Q8NGN3 311 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 OR10G9Q8NGN4 311 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 OR10G7Q8NGN6 311 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 Q8TAT8 98 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 CMTM2Q8TAZ6 248 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 RNASE8Q8TDE3 154 aaKnown RBP5.81□□□□□ -1.48
SNX1-207ENST00000559401 ZNF503Q96F45 646 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 FAM210BQ96KR6 192 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 HYLS1Q96M11 299 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 AQP10Q96PS8 301 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 VGLL1Q99990 258 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 Q9H3A6 140 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 HYDINQ4G0P3 5121 aa5.81□□□□□ -1.48
SNX1-207ENST00000559401 GAGE12BA1L429 117 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 PLAC8L1A1L4L8 177 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 CBY3A6NI87 242 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 RGS13O14921 159 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 GAGE7O76087 117 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 GAGE12FP0CL80 117 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 GAGE12GP0CL81 117 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 GAGE12IP0CL82 117 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 CDC34P49427 236 aaPredicted RBP5.8□□□□□ -1.48
SNX1-207ENST00000559401 CD300CQ08708 224 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 Q5BKY6 102 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 FAM74A1Q5RGS3 127 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 PQLC2Q6ZP29 291 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 C9orf47Q6ZRZ4 202 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 LYPD1Q8N2G4 141 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 OR2T35Q8NGX2 323 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 ASB13Q8WXK3 278 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 PYGO2Q9BRQ0 406 aa5.8□□□□□ -1.48
SNX1-207ENST00000559401 BORCS7-ASMTA0A0B4J1R7 106 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 PGPA6NDG6 321 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 KLLNB2CW77 178 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 NUDT3O95989 172 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 ATP6V0CP27449 155 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 ZNF138P52744 262 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 IQCF2Q8IXL9 164 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 EIF4E3Q8N5X7 224 aaKnown RBP5.79□□□□□ -1.48
SNX1-207ENST00000559401 POM121L12Q8N7R1 296 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 ZNF680Q8NEM1 530 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 RXFP4Q8TDU9 374 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 ARPC5LQ9BPX5 153 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 ATG101Q9BSB4 218 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 PSMG3Q9BT73 122 aaPredicted RBP5.79□□□□□ -1.48
SNX1-207ENST00000559401 ZNF492Q9P255 531 aa5.79□□□□□ -1.48
SNX1-207ENST00000559401 IGLV2-18A0A075B6J9 118 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 RBAKDNA6NC62 111 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 DIRC3C9JPN6 131 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 M0R2N4 97 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 MBP02144 154 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 ARL14EPLP0DKL9 152 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 CRISP2P16562 243 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 OR5I1Q13606 314 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 PRR9Q5T870 116 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 RPL7L1Q6DKI1 246 aaKnown RBP5.78□□□□□ -1.48
SNX1-207ENST00000559401 GOLT1AQ6ZVE7 132 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 ZFAND2AQ8N6M9 145 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 C15orf53Q8NAA6 179 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 OR2G3Q8NGZ4 309 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 FAM19A4Q96LR4 140 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 SH3BGRL3Q9H299 93 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 OTORQ9NRC9 128 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 GSN-AS1Q9NRJ2 163 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 TNFSF18Q9UNG2 199 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 DNAH1Q9P2D7 4330 aa5.78□□□□□ -1.48
SNX1-207ENST00000559401 TRGV2A0A075B6R0 118 aa5.77□□□□□ -1.49
SNX1-207ENST00000559401 IGHV1OR15-1A0A075B7D0 117 aa5.77□□□□□ -1.49
SNX1-207ENST00000559401 TRGV1A0A0A0MS02 117 aa5.77□□□□□ -1.49
SNX1-207ENST00000559401 RNF222A6NCQ9 220 aa5.77□□□□□ -1.49
SNX1-207ENST00000559401 ARPC5O15511 151 aa5.77□□□□□ -1.49
SNX1-207ENST00000559401 GNG5P63218 68 aa5.77□□□□□ -1.49
SNX1-207ENST00000559401 SERF2P84101 59 aa5.77□□□□□ -1.49
SNX1-207ENST00000559401 MUC21Q5SSG8 566 aa5.77□□□□□ -1.49
SNX1-207ENST00000559401 Q6ZTI0 123 aa5.77□□□□□ -1.49
SNX1-207ENST00000559401 RAB24Q969Q5 203 aa5.77□□□□□ -1.49
SNX1-207ENST00000559401 GNPNAT1Q96EK6 184 aaPredicted RBP5.77□□□□□ -1.49
SNX1-207ENST00000559401 ACTR3CQ9C0K3 210 aaPredicted RBP5.77□□□□□ -1.49
SNX1-207ENST00000559401 NAGKQ9UJ70 344 aa5.77□□□□□ -1.49
SNX1-207ENST00000559401 A0A0J9YY99 117 aa5.76□□□□□ -1.49
SNX1-207ENST00000559401 SMLR1H3BR10 107 aa5.76□□□□□ -1.49
SNX1-207ENST00000559401 ZNF324O75467 553 aaPredicted RBP5.76□□□□□ -1.49
SNX1-207ENST00000559401 NMBP08949 121 aa5.76□□□□□ -1.49
SNX1-207ENST00000559401 STAG3L2P0CL84 134 aa5.76□□□□□ -1.49
SNX1-207ENST00000559401 STAG3L3P0CL85 134 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms