RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 NHLRC2Q8NBF2 726 aa12.45□□□□□ -0.42
TPM1-219ENST00000559397 TGIF2-C20orf24A0A0A6YYL0 155 aa12.44□□□□□ -0.42
TPM1-219ENST00000559397 SAP30O75446 220 aa12.44□□□□□ -0.42
TPM1-219ENST00000559397 IGLL1P15814 213 aa12.44□□□□□ -0.42
TPM1-219ENST00000559397 ERVFC1-1P60608 527 aa12.44□□□□□ -0.42
TPM1-219ENST00000559397 FLI1Q01543 452 aaPredicted RBP12.44□□□□□ -0.42
TPM1-219ENST00000559397 IGFL4Q6B9Z1 124 aa12.44□□□□□ -0.42
TPM1-219ENST00000559397 LCN12Q6JVE5 192 aa12.44□□□□□ -0.42
TPM1-219ENST00000559397 TMEM183AQ8IXX5 376 aa12.44□□□□□ -0.42
TPM1-219ENST00000559397 MRPL53Q96EL3 112 aaKnown RBP12.44□□□□□ -0.42
TPM1-219ENST00000559397 MCRIP2Q9BUT9 160 aaKnown RBP12.44□□□□□ -0.42
TPM1-219ENST00000559397 CLEC5AQ9NY25 188 aa12.44□□□□□ -0.42
TPM1-219ENST00000559397 PSG8Q9UQ74 426 aa12.44□□□□□ -0.42
TPM1-219ENST00000559397 V9GYV3 84 aa12.44□□□□□ -0.42
TPM1-219ENST00000559397 FBLL1A6NHQ2 334 aaKnown RBP12.43□□□□□ -0.42
TPM1-219ENST00000559397 DEFB114Q30KQ6 69 aa12.43□□□□□ -0.42
TPM1-219ENST00000559397 C9orf66Q5T8R8 295 aa12.43□□□□□ -0.42
TPM1-219ENST00000559397 RNASE7Q9H1E1 156 aaKnown RBP12.43□□□□□ -0.42
TPM1-219ENST00000559397 ZFP30Q9Y2G7 519 aa12.43□□□□□ -0.42
TPM1-219ENST00000559397 SOCS3O14543 225 aa12.42□□□□□ -0.42
TPM1-219ENST00000559397 S100PP25815 95 aa12.42□□□□□ -0.42
TPM1-219ENST00000559397 PRNTQ86SH4 94 aa12.42□□□□□ -0.42
TPM1-219ENST00000559397 SELENOKQ9Y6D0 94 aa12.42□□□□□ -0.42
TPM1-219ENST00000559397 IGLV1-51P01701 117 aa12.42□□□□□ -0.42
TPM1-219ENST00000559397 BMI1P35226 326 aa12.42□□□□□ -0.42
TPM1-219ENST00000559397 INSL3P51460 131 aa12.42□□□□□ -0.42
TPM1-219ENST00000559397 IBA57Q5T440 356 aaKnown RBP12.42□□□□□ -0.42
TPM1-219ENST00000559397 DYNLRB2Q8TF09 96 aa12.42□□□□□ -0.42
TPM1-219ENST00000559397 BIN3Q9NQY0 253 aa12.42□□□□□ -0.42
TPM1-219ENST00000559397 IL36BQ9NZH7 164 aa12.42□□□□□ -0.42
TPM1-219ENST00000559397 ZNF492Q9P255 531 aa12.42□□□□□ -0.42
TPM1-219ENST00000559397 IGKV2-40A0A087WW87 121 aaPredicted RBP12.41□□□□□ -0.42
TPM1-219ENST00000559397 ZNF705FA8MVS1 300 aaPredicted RBP12.41□□□□□ -0.42
TPM1-219ENST00000559397 WIPF1O43516 503 aa12.41□□□□□ -0.42
TPM1-219ENST00000559397 IGKV2D-40P01614 121 aaPredicted RBP12.41□□□□□ -0.42
TPM1-219ENST00000559397 KCNIP4Q6PIL6 250 aa12.41□□□□□ -0.42
TPM1-219ENST00000559397 RNF182Q8N6D2 247 aa12.41□□□□□ -0.42
TPM1-219ENST00000559397 FAM210BQ96KR6 192 aa12.41□□□□□ -0.42
TPM1-219ENST00000559397 NOTCH3Q9UM47 2321 aa12.41□□□□□ -0.42
TPM1-219ENST00000559397 RBAKDNA6NC62 111 aa12.4□□□□□ -0.42
TPM1-219ENST00000559397 CD300EQ496F6 205 aaPredicted RBP12.4□□□□□ -0.42
TPM1-219ENST00000559397 COX8CQ7Z4L0 72 aa12.4□□□□□ -0.42
TPM1-219ENST00000559397 NUDT10Q8NFP7 164 aa12.4□□□□□ -0.42
TPM1-219ENST00000559397 NUDT11Q96G61 164 aa12.4□□□□□ -0.42
TPM1-219ENST00000559397 C16orf92Q96LL3 132 aa12.4□□□□□ -0.42
TPM1-219ENST00000559397 NRN1Q9NPD7 142 aa12.4□□□□□ -0.42
TPM1-219ENST00000559397 C19orf71A6NCJ1 209 aa12.39□□□□□ -0.43
TPM1-219ENST00000559397 PRAC2D3DTV9 90 aa12.39□□□□□ -0.43
TPM1-219ENST00000559397 LINC00322Q6ZN03 302 aaPredicted RBP12.39□□□□□ -0.43
TPM1-219ENST00000559397 TCF24Q7RTU0 167 aa12.39□□□□□ -0.43
TPM1-219ENST00000559397 TRAV9-1A0A075B6T8 112 aa12.38□□□□□ -0.43
TPM1-219ENST00000559397 IZUMO1RA6ND01 250 aa12.38□□□□□ -0.43
TPM1-219ENST00000559397 PRB4P10163 310 aaPredicted RBP12.38□□□□□ -0.43
TPM1-219ENST00000559397 OXLD1Q5BKU9 147 aa12.38□□□□□ -0.43
TPM1-219ENST00000559397 TMEM61Q8N0U2 210 aa12.38□□□□□ -0.43
TPM1-219ENST00000559397 OR2K2Q8NGT1 345 aa12.38□□□□□ -0.43
TPM1-219ENST00000559397 VGLL1Q99990 258 aa12.38□□□□□ -0.43
TPM1-219ENST00000559397 GATCO43716 136 aaKnown RBP12.38□□□□□ -0.43
TPM1-219ENST00000559397 TYMSP04818 313 aa12.38□□□□□ -0.43
TPM1-219ENST00000559397 FAM3BP58499 235 aaPredicted RBP12.38□□□□□ -0.43
TPM1-219ENST00000559397 PRR27Q6MZM9 219 aa12.38□□□□□ -0.43
TPM1-219ENST00000559397 BTF3L4Q96K17 158 aa12.38□□□□□ -0.43
TPM1-219ENST00000559397 C20orf173Q96LM9 149 aa12.38□□□□□ -0.43
TPM1-219ENST00000559397 GPR61Q9BZJ8 451 aa12.38□□□□□ -0.43
TPM1-219ENST00000559397 TRAV25A0A0B4J276 109 aa12.37□□□□□ -0.43
TPM1-219ENST00000559397 A0A1W2PPQ1 181 aa12.37□□□□□ -0.43
TPM1-219ENST00000559397 ZNF705GA8MUZ8 300 aaPredicted RBP12.37□□□□□ -0.43
TPM1-219ENST00000559397 SAPCD1Q5SSQ6 148 aa12.37□□□□□ -0.43
TPM1-219ENST00000559397 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
TPM1-219ENST00000559397 ZC2HC1AQ96GY0 325 aa12.37□□□□□ -0.43
TPM1-219ENST00000559397 PRR25Q96S07 402 aa12.37□□□□□ -0.43
TPM1-219ENST00000559397 SMIM27A0A1W2PRY6 76 aa12.36□□□□□ -0.43
TPM1-219ENST00000559397 NPIPB6E9PJ23 425 aa12.36□□□□□ -0.43
TPM1-219ENST00000559397 RPS10P46783 165 aaKnown RBP12.36□□□□□ -0.43
TPM1-219ENST00000559397 SAMD5Q5TGI4 173 aa12.36□□□□□ -0.43
TPM1-219ENST00000559397 GBGT1Q8N5D6 347 aa12.36□□□□□ -0.43
TPM1-219ENST00000559397 SRD5A3Q9H8P0 318 aa12.36□□□□□ -0.43
TPM1-219ENST00000559397 C1orf196B1AJZ1 125 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 G3V4G9 280 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 RPL11P62913 178 aaKnown RBP12.35□□□□□ -0.43
TPM1-219ENST00000559397 CT83Q5H943 113 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 RBPMS2Q6ZRY4 209 aaKnown RBP12.35□□□□□ -0.43
TPM1-219ENST00000559397 DCANP1Q8TF63 244 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 ASCL2Q99929 193 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 PPP1R14DQ9NXH3 145 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 IGKV3-7A0A075B6H7 116 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 CRIP1P50238 77 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 C9orf47Q6ZRZ4 202 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 C8orf49Q96NF6 230 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 AGPAT4-IT1Q9H0P7 198 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 MS4A6AQ9H2W1 248 aa12.35□□□□□ -0.43
TPM1-219ENST00000559397 P01737 135 aa12.34□□□□□ -0.43
TPM1-219ENST00000559397 ERCC8Q13216 396 aa12.34□□□□□ -0.43
TPM1-219ENST00000559397 OR4B1Q8NGF8 309 aa12.34□□□□□ -0.43
TPM1-219ENST00000559397 Q8TAT8 98 aa12.34□□□□□ -0.43
TPM1-219ENST00000559397 RPP21Q9H633 154 aaKnown RBP12.34□□□□□ -0.43
TPM1-219ENST00000559397 ZNF256Q9Y2P7 627 aaPredicted RBP12.34□□□□□ -0.43
TPM1-219ENST00000559397 CA1P00915 261 aaPredicted RBP12.33□□□□□ -0.44
TPM1-219ENST00000559397 RAB5BP61020 215 aa12.33□□□□□ -0.44
TPM1-219ENST00000559397 EGFEM1PQ0D2K5 195 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms