RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 FAM167A-AS1Q96KT0 104 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 PYGO2Q9BRQ0 406 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 PSMG3Q9BT73 122 aaPredicted RBP3.14□□□□□ -1.91
SNX1-205ENST00000559339 DKK2Q9UBU2 259 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 TIMM8BQ9Y5J9 83 aaPredicted RBP3.14□□□□□ -1.91
SNX1-205ENST00000559339 HUWE1Q7Z6Z7 4374 aaKnown RBP3.14□□□□□ -1.91
SNX1-205ENST00000559339 TENM2Q9NT68 2774 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 IGHV4-4A0A075B6R2 117 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 TRBV7-9A0A0J9YWB2 115 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 SNURFLB1AK76 121 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 PRAC2D3DTV9 90 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 J3KRW8 73 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 K7EQM0 130 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 M0R3E3 92 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 RGS13O14921 159 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 CT45A10P0DMU9 189 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 DEFB130BP0DP73 79 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 DEFB130AP0DP74 79 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 PRB4P10163 310 aaPredicted RBP3.13□□□□□ -1.91
SNX1-205ENST00000559339 HTN3P15516 51 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 CDC34P49427 236 aaPredicted RBP3.13□□□□□ -1.91
SNX1-205ENST00000559339 AKR1C8PQ5T2L2 129 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 GFI1BQ5VTD9 330 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 ZNF767PQ75MW2 155 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 ZNF680Q8NEM1 530 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 OR2G3Q8NGZ4 309 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 FXYD5Q96DB9 178 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 HYLS1Q96M11 299 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 ACTR3CQ9C0K3 210 aaPredicted RBP3.13□□□□□ -1.91
SNX1-205ENST00000559339 Q9H3A6 140 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 WFDC1Q9HC57 220 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 TNFSF18Q9UNG2 199 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 CELA1Q9UNI1 258 aa3.13□□□□□ -1.91
SNX1-205ENST00000559339 IGKV2-40A0A087WW87 121 aaPredicted RBP3.12□□□□□ -1.91
SNX1-205ENST00000559339 TRAV12-3A0A0B4J271 114 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 SERTM2A0A1B0GWG4 89 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 C7orf71A4D174 169 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 RNF222A6NCQ9 220 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 PGPA6NDG6 321 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 CBY3A6NI87 242 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 KLLNB2CW77 178 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 HMGB3O15347 200 aaKnown RBP3.12□□□□□ -1.91
SNX1-205ENST00000559339 ARPC5O15511 151 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 CXorf1O96002 111 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 IGKV2D-40P01614 121 aaPredicted RBP3.12□□□□□ -1.91
SNX1-205ENST00000559339 ATP5G1P05496 136 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 ARL14EPLP0DKL9 152 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 P0DMU3 169 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 FAM231AP0DMU4 169 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 FAM231CP0DMU5 169 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 AZU1P20160 251 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 ATP6V0CP27449 155 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 RNASE4P34096 147 aaKnown RBP3.12□□□□□ -1.91
SNX1-205ENST00000559339 ATP5G3P48201 142 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 ZNF138P52744 262 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 RAB2AP61019 212 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 ERCC8Q13216 396 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 Q5BKY6 102 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 C9orf47Q6ZRZ4 202 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 IQCF2Q8IXL9 164 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 ARL6IP6Q8N6S5 226 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 C15orf53Q8NAA6 179 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 RNASE8Q8TDE3 154 aaKnown RBP3.12□□□□□ -1.91
SNX1-205ENST00000559339 TMED6Q8WW62 240 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 RAB24Q969Q5 203 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 PHYHIPLQ96FC7 376 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 ARPC5LQ9BPX5 153 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 NDFIP1Q9BT67 221 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 AGPAT4-IT1Q9H0P7 198 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 NOP10Q9NPE3 64 aaKnown RBP3.12□□□□□ -1.91
SNX1-205ENST00000559339 OTORQ9NRC9 128 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 TMEM167BQ9NRX6 74 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 ZNF492Q9P255 531 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 APLNQ9ULZ1 77 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 RPH3ALQ9UNE2 315 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 LENEPQ9Y5L5 61 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 CSMD3Q7Z407 3707 aa3.12□□□□□ -1.91
SNX1-205ENST00000559339 TRGV2A0A075B6R0 118 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 A0A0D9SG52 128 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 FBLL1A6NHQ2 334 aaKnown RBP3.11□□□□□ -1.91
SNX1-205ENST00000559339 HMSDA8MTL9 139 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 DIRC3C9JPN6 131 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 F5H768 121 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 ZNF324O75467 553 aaPredicted RBP3.11□□□□□ -1.91
SNX1-205ENST00000559339 PRM2P04554 102 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 STAG3L2P0CL84 134 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 STAG3L3P0CL85 134 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 CRISP2P16562 243 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 EIF5AP63241 154 aaKnown RBP3.11□□□□□ -1.91
SNX1-205ENST00000559339 DAZ2Q13117 558 aaKnown RBP3.11□□□□□ -1.91
SNX1-205ENST00000559339 BTN1A1Q13410 526 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 ZNF345Q14585 488 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 KIR3DS1Q14943 382 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 ANXA2RQ3ZCQ2 193 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 ZFP69Q49AA0 526 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 IBA57Q5T440 356 aaKnown RBP3.11□□□□□ -1.91
SNX1-205ENST00000559339 RPL7L1Q6DKI1 246 aaKnown RBP3.11□□□□□ -1.91
SNX1-205ENST00000559339 FAM159AQ6UWV7 190 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 UBE2DNLQ8IWF7 75 aa3.11□□□□□ -1.91
SNX1-205ENST00000559339 EIF4E3Q8N5X7 224 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms