RNA–Protein interactions for RNA: ENST00000559257.5

USP3-211, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 2,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-211ENST00000559257 IGHV3-33P01772 117 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 ARMS2P0C7Q2 107 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 EIF4EBP1Q13541 118 aaPredicted RBP6.57□□□□□ -1.36
USP3-211ENST00000559257 IGFL2Q6UWQ7 119 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 FAM167A-AS1Q96KT0 104 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 DEC1Q9P2X7 70 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 PEMTQ9UBM1 199 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 TRAV12-1A0A0B4J245 112 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 A0A0B4J2C4 111 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 TRGV8A0A0C4DH27 118 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 CGB1A6NKQ9 187 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 PCBD1P61457 104 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 ZCCHC24Q8N2G6 241 aaKnown RBP6.57□□□□□ -1.36
USP3-211ENST00000559257 DYNLRB1Q9NP97 96 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 LAMTOR3Q9UHA4 124 aa6.57□□□□□ -1.36
USP3-211ENST00000559257 TRBV30A0A0K0K1B3 111 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 A0A1W2PQD3 144 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 LMO7DNF2Z398 122 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 TGFBR3LH3BV60 316 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 GFRA3O60609 400 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 SCRG1O75711 98 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 DUTP33316 252 aaKnown RBP6.56□□□□□ -1.36
USP3-211ENST00000559257 FOXB1Q99853 325 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 OTORQ9NRC9 128 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 TRAV26-2A0A0B4J265 109 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 TRBV6-1A0A0K0K1D8 114 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 PF4P02776 101 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 SYNJ2BPP57105 145 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 Q6ZRU5 148 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 RNF182Q8N6D2 247 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 SPTSSAQ969W0 71 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 ZNF799Q96GE5 643 aa6.56□□□□□ -1.36
USP3-211ENST00000559257 MYO7AQ13402 2215 aa6.55□□□□□ -1.36
USP3-211ENST00000559257 TRBV7-1A0A0A6YYK4 115 aa6.55□□□□□ -1.36
USP3-211ENST00000559257 F8VRH5 84 aa6.55□□□□□ -1.36
USP3-211ENST00000559257 H7C423 109 aa6.55□□□□□ -1.36
USP3-211ENST00000559257 IGHV3-30P01768 117 aa6.55□□□□□ -1.36
USP3-211ENST00000559257 IGHV3-30-5P0DP03 117 aa6.55□□□□□ -1.36
USP3-211ENST00000559257 FXYD7P58549 80 aa6.55□□□□□ -1.36
USP3-211ENST00000559257 SCGB1D4Q6XE38 83 aa6.55□□□□□ -1.36
USP3-211ENST00000559257 WFDC3Q8IUB2 231 aa6.55□□□□□ -1.36
USP3-211ENST00000559257 SMCR5Q8TEV8 140 aa6.55□□□□□ -1.36
USP3-211ENST00000559257 ADAMTS20P59510 1910 aa6.55□□□□□ -1.36
USP3-211ENST00000559257 ZNF815PA8K554 130 aa6.54□□□□□ -1.36
USP3-211ENST00000559257 COX6B1P14854 86 aa6.54□□□□□ -1.36
USP3-211ENST00000559257 LIFP15018 202 aa6.54□□□□□ -1.36
USP3-211ENST00000559257 IGLV3-21P80748 117 aaPredicted RBP6.54□□□□□ -1.36
USP3-211ENST00000559257 NNATQ16517 81 aa6.54□□□□□ -1.36
USP3-211ENST00000559257 MRPL51Q4U2R6 128 aaKnown RBP6.54□□□□□ -1.36
USP3-211ENST00000559257 SPINK9Q5DT21 86 aa6.54□□□□□ -1.36
USP3-211ENST00000559257 FP248Q71RG6 208 aaPredicted RBP6.54□□□□□ -1.36
USP3-211ENST00000559257 LRP4O75096 1905 aa6.54□□□□□ -1.36
USP3-211ENST00000559257 KNCNA6PVL3 124 aa6.54□□□□□ -1.36
USP3-211ENST00000559257 DLX1P56177 255 aa6.54□□□□□ -1.36
USP3-211ENST00000559257 RPS21P63220 83 aaKnown RBP6.54□□□□□ -1.36
USP3-211ENST00000559257 MRPL14Q6P1L8 145 aaKnown RBP6.54□□□□□ -1.36
USP3-211ENST00000559257 PRR15Q8IV56 129 aa6.54□□□□□ -1.36
USP3-211ENST00000559257 PAXXQ9BUH6 204 aa6.54□□□□□ -1.36
USP3-211ENST00000559257 HOXB4P17483 251 aaPredicted RBP6.53□□□□□ -1.36
USP3-211ENST00000559257 LOXP28300 417 aaPredicted RBP6.53□□□□□ -1.36
USP3-211ENST00000559257 DEFB103AP81534 67 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 PCOLCEQ15113 449 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 C9orf139Q6ZV77 190 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 TMEM263Q8WUH6 116 aaKnown RBP6.53□□□□□ -1.36
USP3-211ENST00000559257 SPAG17Q6Q759 2223 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 A0A0J9YY99 117 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 CKS2P33552 79 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 TCF15Q12870 199 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 C20orf204Q6ZNR8 217 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 CD177Q8N6Q3 437 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 C17orf77Q96MU5 243 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 ZNF714Q96N38 554 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 GNG12Q9UBI6 72 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 SLC25A15Q9Y619 301 aa6.53□□□□□ -1.36
USP3-211ENST00000559257 EML6Q6ZMW3 1958 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 TCRAP04437 139 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 BRWD1-AS2P59051 145 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 TDHQ8IZJ6 230 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 FXYD5Q96DB9 178 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 EMC6Q9BV81 110 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.52□□□□□ -1.37
USP3-211ENST00000559257 C17orf98A8MV24 154 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 ERCC8Q13216 396 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 FHL2Q14192 279 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 C3orf36Q3SXR2 165 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 SLC25A29Q8N8R3 303 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 TMEM243Q9BU79 118 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 PROK2Q9HC23 129 aa6.52□□□□□ -1.37
USP3-211ENST00000559257 LINC00473A8K010 186 aa6.51□□□□□ -1.37
USP3-211ENST00000559257 NDUFA3O95167 84 aa6.51□□□□□ -1.37
USP3-211ENST00000559257 IGHV4-39P01824 125 aa6.51□□□□□ -1.37
USP3-211ENST00000559257 HILS1P60008 231 aa6.51□□□□□ -1.37
USP3-211ENST00000559257 ZNF542PQ5EBM4 170 aa6.51□□□□□ -1.37
USP3-211ENST00000559257 Q86TA4 180 aa6.51□□□□□ -1.37
USP3-211ENST00000559257 DAND5Q8N907 189 aa6.51□□□□□ -1.37
USP3-211ENST00000559257 SRSF12Q8WXF0 261 aaKnown RBP6.51□□□□□ -1.37
USP3-211ENST00000559257 ZNF837Q96EG3 531 aaPredicted RBP6.51□□□□□ -1.37
USP3-211ENST00000559257 RNF7Q9UBF6 113 aa6.51□□□□□ -1.37
USP3-211ENST00000559257 NOTCH4Q99466 2003 aa6.51□□□□□ -1.37
USP3-211ENST00000559257 BUB3O43684 328 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms