RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 EIF3GO75821 320 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS18-203ENST00000558855 S100A11P31949 105 aa9.36□□□□□ -0.91
VPS18-203ENST00000558855 LEPP41159 167 aa9.36□□□□□ -0.91
VPS18-203ENST00000558855 ASAH1Q13510 395 aa9.36□□□□□ -0.91
VPS18-203ENST00000558855 GUK1Q16774 197 aa9.36□□□□□ -0.91
VPS18-203ENST00000558855 ZFAND2AQ8N6M9 145 aa9.36□□□□□ -0.91
VPS18-203ENST00000558855 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
VPS18-203ENST00000558855 PFDN5Q99471 154 aa9.36□□□□□ -0.91
VPS18-203ENST00000558855 VGLL1Q99990 258 aa9.36□□□□□ -0.91
VPS18-203ENST00000558855 RNF24Q9Y225 148 aa9.36□□□□□ -0.91
VPS18-203ENST00000558855 KLF12Q9Y4X4 402 aa9.36□□□□□ -0.91
VPS18-203ENST00000558855 HIST1H1EP10412 219 aaKnown RBP9.35□□□□□ -0.91
VPS18-203ENST00000558855 PVALBP20472 110 aaPredicted RBP9.35□□□□□ -0.91
VPS18-203ENST00000558855 M6PRP20645 277 aa9.35□□□□□ -0.91
VPS18-203ENST00000558855 CCL18P55774 89 aa9.35□□□□□ -0.91
VPS18-203ENST00000558855 RAB31Q13636 194 aa9.35□□□□□ -0.91
VPS18-203ENST00000558855 ICAM4Q14773 271 aa9.35□□□□□ -0.91
VPS18-203ENST00000558855 SOHLH1Q5JUK2 328 aa9.35□□□□□ -0.91
VPS18-203ENST00000558855 MRPL53Q96EL3 112 aaKnown RBP9.35□□□□□ -0.91
VPS18-203ENST00000558855 ZNF503Q96F45 646 aa9.35□□□□□ -0.91
VPS18-203ENST00000558855 PHYHIPLQ96FC7 376 aa9.35□□□□□ -0.91
VPS18-203ENST00000558855 SNURFLB1AK76 121 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 RLN2P04090 185 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 DAZ2Q13117 558 aaKnown RBP9.34□□□□□ -0.91
VPS18-203ENST00000558855 CLINT1Q14677 625 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 LRRC37A5PQ49AS3 106 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 FAM122CQ6P4D5 195 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 STX12Q86Y82 276 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 CCDC28AQ8IWP9 274 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 OR5C1Q8NGR4 320 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 Q8TAT8 98 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 FXYD5Q96DB9 178 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 PYGO2Q9BRQ0 406 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 Q9H8V8 135 aa9.34□□□□□ -0.91
VPS18-203ENST00000558855 A0A096LPF7 62 aa9.33□□□□□ -0.92
VPS18-203ENST00000558855 SLC25A5P05141 298 aaKnown RBP9.33□□□□□ -0.92
VPS18-203ENST00000558855 OR10J4P0C629 311 aa9.33□□□□□ -0.92
VPS18-203ENST00000558855 CRISP2P16562 243 aa9.33□□□□□ -0.92
VPS18-203ENST00000558855 RNASE4P34096 147 aaKnown RBP9.33□□□□□ -0.92
VPS18-203ENST00000558855 H2BFSP57053 126 aa9.33□□□□□ -0.92
VPS18-203ENST00000558855 KRTAP10-2P60368 255 aa9.33□□□□□ -0.92
VPS18-203ENST00000558855 HBG1P69891 147 aa9.33□□□□□ -0.92
VPS18-203ENST00000558855 HBG2P69892 147 aa9.33□□□□□ -0.92
VPS18-203ENST00000558855 C9orf47Q6ZRZ4 202 aa9.33□□□□□ -0.92
VPS18-203ENST00000558855 NDUFA13Q9P0J0 144 aa9.33□□□□□ -0.92
VPS18-203ENST00000558855 C16orf90A8MZG2 172 aa9.32□□□□□ -0.92
VPS18-203ENST00000558855 ATP6V1FQ16864 119 aa9.32□□□□□ -0.92
VPS18-203ENST00000558855 LINC00467Q9BRT7 94 aa9.32□□□□□ -0.92
VPS18-203ENST00000558855 Q9H3A6 140 aa9.32□□□□□ -0.92
VPS18-203ENST00000558855 MRPL16Q9NX20 251 aaKnown RBP9.32□□□□□ -0.92
VPS18-203ENST00000558855 MRPS16Q9Y3D3 137 aaKnown RBP9.32□□□□□ -0.92
VPS18-203ENST00000558855 TIMM9Q9Y5J7 89 aa9.32□□□□□ -0.92
VPS18-203ENST00000558855 TRGV1A0A0A0MS02 117 aa9.31□□□□□ -0.92
VPS18-203ENST00000558855 SPINK4O60575 86 aa9.31□□□□□ -0.92
VPS18-203ENST00000558855 UPK1BO75841 260 aa9.31□□□□□ -0.92
VPS18-203ENST00000558855 IGHV3-53P01767 116 aa9.31□□□□□ -0.92
VPS18-203ENST00000558855 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
VPS18-203ENST00000558855 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
VPS18-203ENST00000558855 TCL1AP56279 114 aa9.31□□□□□ -0.92
VPS18-203ENST00000558855 PDE6HQ13956 83 aa9.31□□□□□ -0.92
VPS18-203ENST00000558855 EIF4E3Q8N5X7 224 aaKnown RBP9.31□□□□□ -0.92
VPS18-203ENST00000558855 LINC00477Q96M19 166 aa9.31□□□□□ -0.92
VPS18-203ENST00000558855 UPK3BQ9BT76 320 aa9.31□□□□□ -0.92
VPS18-203ENST00000558855 WDR61Q9GZS3 305 aaKnown RBP9.31□□□□□ -0.92
VPS18-203ENST00000558855 FUT9Q9Y231 359 aa9.31□□□□□ -0.92
VPS18-203ENST00000558855 PRELID1Q9Y255 219 aa9.31□□□□□ -0.92
VPS18-203ENST00000558855 MPDU1O75352 247 aa9.3□□□□□ -0.92
VPS18-203ENST00000558855 ANXA2RQ3ZCQ2 193 aa9.3□□□□□ -0.92
VPS18-203ENST00000558855 MZT2BQ6NZ67 158 aa9.3□□□□□ -0.92
VPS18-203ENST00000558855 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
VPS18-203ENST00000558855 SPATA12Q7Z6I5 190 aa9.3□□□□□ -0.92
VPS18-203ENST00000558855 C18orf15Q96N68 181 aa9.3□□□□□ -0.92
VPS18-203ENST00000558855 NMES1Q9C002 83 aa9.3□□□□□ -0.92
VPS18-203ENST00000558855 OR51M1Q9H341 326 aa9.3□□□□□ -0.92
VPS18-203ENST00000558855 ZNF492Q9P255 531 aa9.3□□□□□ -0.92
VPS18-203ENST00000558855 E5RGE8 158 aa9.29□□□□□ -0.92
VPS18-203ENST00000558855 H3BNG1 76 aa9.29□□□□□ -0.92
VPS18-203ENST00000558855 ENKURQ8TC29 256 aa9.29□□□□□ -0.92
VPS18-203ENST00000558855 PAXXQ9BUH6 204 aa9.29□□□□□ -0.92
VPS18-203ENST00000558855 TNFRSF18Q9Y5U5 241 aa9.29□□□□□ -0.92
VPS18-203ENST00000558855 TRGV2A0A075B6R0 118 aa9.28□□□□□ -0.92
VPS18-203ENST00000558855 GPX1P07203 203 aa9.28□□□□□ -0.92
VPS18-203ENST00000558855 LINC00315P59091 139 aa9.28□□□□□ -0.92
VPS18-203ENST00000558855 MUC21Q5SSG8 566 aa9.28□□□□□ -0.92
VPS18-203ENST00000558855 ZNF680Q8NEM1 530 aa9.28□□□□□ -0.92
VPS18-203ENST00000558855 PPP1R1CQ8WVI7 109 aa9.28□□□□□ -0.92
VPS18-203ENST00000558855 SMIM3Q9BZL3 60 aa9.28□□□□□ -0.92
VPS18-203ENST00000558855 AAMDCQ9H7C9 122 aa9.28□□□□□ -0.92
VPS18-203ENST00000558855 WFDC1Q9HC57 220 aa9.28□□□□□ -0.92
VPS18-203ENST00000558855 MDFICQ9P1T7 246 aa9.28□□□□□ -0.92
VPS18-203ENST00000558855 FAT1Q14517 4588 aa9.27□□□□□ -0.92
VPS18-203ENST00000558855 IGHV1OR15-1A0A075B7D0 117 aa9.27□□□□□ -0.93
VPS18-203ENST00000558855 A6NHS1 94 aa9.27□□□□□ -0.93
VPS18-203ENST00000558855 INMT-MINDY4F8WBC2 141 aa9.27□□□□□ -0.93
VPS18-203ENST00000558855 CDK2AP2O75956 126 aa9.27□□□□□ -0.93
VPS18-203ENST00000558855 ZNF138P52744 262 aa9.27□□□□□ -0.93
VPS18-203ENST00000558855 FHL2Q14192 279 aa9.27□□□□□ -0.93
VPS18-203ENST00000558855 TMEM78Q5T7P6 136 aa9.27□□□□□ -0.93
VPS18-203ENST00000558855 LINC00299Q6ZSB3 139 aa9.27□□□□□ -0.93
VPS18-203ENST00000558855 S100ZQ8WXG8 99 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms