RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 BLNKQ8WV28 456 aa10.93□□□□□ -0.66
CSHL1-208ENST00000558609 LINC00477Q96M19 166 aa10.93□□□□□ -0.66
CSHL1-208ENST00000558609 OR51M1Q9H341 326 aa10.93□□□□□ -0.66
CSHL1-208ENST00000558609 AAMDCQ9H7C9 122 aa10.93□□□□□ -0.66
CSHL1-208ENST00000558609 MBD2Q9UBB5 411 aa10.93□□□□□ -0.66
CSHL1-208ENST00000558609 HMSDA8MTL9 139 aa10.92□□□□□ -0.66
CSHL1-208ENST00000558609 RNF212Q495C1 297 aa10.92□□□□□ -0.66
CSHL1-208ENST00000558609 CCDC28AQ8IWP9 274 aa10.92□□□□□ -0.66
CSHL1-208ENST00000558609 EXOC3-AS1Q8N2X6 119 aa10.92□□□□□ -0.66
CSHL1-208ENST00000558609 C15orf53Q8NAA6 179 aa10.92□□□□□ -0.66
CSHL1-208ENST00000558609 FAM19A4Q96LR4 140 aa10.92□□□□□ -0.66
CSHL1-208ENST00000558609 NOP10Q9NPE3 64 aaKnown RBP10.92□□□□□ -0.66
CSHL1-208ENST00000558609 FUT9Q9Y231 359 aa10.92□□□□□ -0.66
CSHL1-208ENST00000558609 TRAV12-3A0A0B4J271 114 aa10.91□□□□□ -0.66
CSHL1-208ENST00000558609 J3KRW8 73 aa10.91□□□□□ -0.66
CSHL1-208ENST00000558609 SLC25A5P05141 298 aaKnown RBP10.91□□□□□ -0.66
CSHL1-208ENST00000558609 ATP5G1P05496 136 aa10.91□□□□□ -0.66
CSHL1-208ENST00000558609 ATP5G3P48201 142 aa10.91□□□□□ -0.66
CSHL1-208ENST00000558609 ERCC8Q13216 396 aa10.91□□□□□ -0.66
CSHL1-208ENST00000558609 ICAM4Q14773 271 aa10.91□□□□□ -0.66
CSHL1-208ENST00000558609 C9orf47Q6ZRZ4 202 aa10.91□□□□□ -0.66
CSHL1-208ENST00000558609 FXYD5Q96DB9 178 aa10.91□□□□□ -0.66
CSHL1-208ENST00000558609 PYGO2Q9BRQ0 406 aa10.91□□□□□ -0.66
CSHL1-208ENST00000558609 PAXXQ9BUH6 204 aa10.91□□□□□ -0.66
CSHL1-208ENST00000558609 AGPAT4-IT1Q9H0P7 198 aa10.91□□□□□ -0.66
CSHL1-208ENST00000558609 A0A0D9SG52 128 aa10.9□□□□□ -0.66
CSHL1-208ENST00000558609 KLLNB2CW77 178 aa10.9□□□□□ -0.66
CSHL1-208ENST00000558609 IFNA5P01569 189 aa10.9□□□□□ -0.66
CSHL1-208ENST00000558609 UBE2DNLQ8IWF7 75 aa10.9□□□□□ -0.66
CSHL1-208ENST00000558609 SCGB1C1Q8TD33 95 aa10.9□□□□□ -0.66
CSHL1-208ENST00000558609 RNF141Q8WVD5 230 aa10.9□□□□□ -0.66
CSHL1-208ENST00000558609 C7orf71A4D174 169 aa10.89□□□□□ -0.67
CSHL1-208ENST00000558609 F5H768 121 aa10.89□□□□□ -0.67
CSHL1-208ENST00000558609 G3V3Q6 166 aa10.89□□□□□ -0.67
CSHL1-208ENST00000558609 OR10J4P0C629 311 aa10.89□□□□□ -0.67
CSHL1-208ENST00000558609 CRISP2P16562 243 aa10.89□□□□□ -0.67
CSHL1-208ENST00000558609 LGALS9BQ3B8N2 356 aa10.89□□□□□ -0.67
CSHL1-208ENST00000558609 LGALSLQ3ZCW2 172 aaPredicted RBP10.89□□□□□ -0.67
CSHL1-208ENST00000558609 FFAR4Q5NUL3 377 aa10.89□□□□□ -0.67
CSHL1-208ENST00000558609 C9orf62Q8N4C0 152 aa10.89□□□□□ -0.67
CSHL1-208ENST00000558609 LINC00612Q8N6U2 182 aa10.89□□□□□ -0.67
CSHL1-208ENST00000558609 SMIM3Q9BZL3 60 aa10.89□□□□□ -0.67
CSHL1-208ENST00000558609 TNFSF18Q9UNG2 199 aa10.89□□□□□ -0.67
CSHL1-208ENST00000558609 KANTRA0A1W2PQU2 76 aa10.88□□□□□ -0.67
CSHL1-208ENST00000558609 OR7C2O60412 319 aa10.88□□□□□ -0.67
CSHL1-208ENST00000558609 ZNF324O75467 553 aaPredicted RBP10.88□□□□□ -0.67
CSHL1-208ENST00000558609 NMBP08949 121 aa10.88□□□□□ -0.67
CSHL1-208ENST00000558609 FAM122CQ6P4D5 195 aa10.88□□□□□ -0.67
CSHL1-208ENST00000558609 LINC00336Q6ZUF6 198 aa10.88□□□□□ -0.67
CSHL1-208ENST00000558609 TMUB2Q71RG4 321 aa10.88□□□□□ -0.67
CSHL1-208ENST00000558609 LYPD1Q8N2G4 141 aa10.88□□□□□ -0.67
CSHL1-208ENST00000558609 ZNF503Q96F45 646 aa10.88□□□□□ -0.67
CSHL1-208ENST00000558609 LINC00467Q9BRT7 94 aa10.88□□□□□ -0.67
CSHL1-208ENST00000558609 WFDC1Q9HC57 220 aa10.88□□□□□ -0.67
CSHL1-208ENST00000558609 BOLA1Q9Y3E2 137 aa10.88□□□□□ -0.67
CSHL1-208ENST00000558609 IGKV2-40A0A087WW87 121 aaPredicted RBP10.87□□□□□ -0.67
CSHL1-208ENST00000558609 SNURFLB1AK76 121 aa10.87□□□□□ -0.67
CSHL1-208ENST00000558609 IGKV2D-40P01614 121 aaPredicted RBP10.87□□□□□ -0.67
CSHL1-208ENST00000558609 FAM3BP58499 235 aaPredicted RBP10.87□□□□□ -0.67
CSHL1-208ENST00000558609 DAZ2Q13117 558 aaKnown RBP10.87□□□□□ -0.67
CSHL1-208ENST00000558609 TMEM78Q5T7P6 136 aa10.87□□□□□ -0.67
CSHL1-208ENST00000558609 PHYHIPLQ96FC7 376 aa10.87□□□□□ -0.67
CSHL1-208ENST00000558609 VGLL1Q99990 258 aa10.87□□□□□ -0.67
CSHL1-208ENST00000558609 ABCA13Q86UQ4 5058 aa10.86□□□□□ -0.67
CSHL1-208ENST00000558609 M0R2N4 97 aa10.86□□□□□ -0.67
CSHL1-208ENST00000558609 RNASE4P34096 147 aaKnown RBP10.86□□□□□ -0.67
CSHL1-208ENST00000558609 TAS2R45P59539 299 aa10.86□□□□□ -0.67
CSHL1-208ENST00000558609 BTN1A1Q13410 526 aa10.86□□□□□ -0.67
CSHL1-208ENST00000558609 KHDC3LQ587J8 217 aa10.86□□□□□ -0.67
CSHL1-208ENST00000558609 Q6ZR54 194 aa10.86□□□□□ -0.67
CSHL1-208ENST00000558609 ZFAND2AQ8N6M9 145 aa10.86□□□□□ -0.67
CSHL1-208ENST00000558609 ZNF492Q9P255 531 aa10.86□□□□□ -0.67
CSHL1-208ENST00000558609 NACAE9PAV3 2078 aa10.85□□□□□ -0.67
CSHL1-208ENST00000558609 TRBV7-9A0A0J9YWB2 115 aa10.85□□□□□ -0.67
CSHL1-208ENST00000558609 RBAKDNA6NC62 111 aa10.85□□□□□ -0.67
CSHL1-208ENST00000558609 GPX1P07203 203 aa10.85□□□□□ -0.67
CSHL1-208ENST00000558609 RANP62826 216 aaKnown RBP10.85□□□□□ -0.67
CSHL1-208ENST00000558609 UBE2L3P68036 154 aaKnown RBP10.85□□□□□ -0.67
CSHL1-208ENST00000558609 ZNF345Q14585 488 aa10.85□□□□□ -0.67
CSHL1-208ENST00000558609 ANXA2RQ3ZCQ2 193 aa10.85□□□□□ -0.67
CSHL1-208ENST00000558609 KCNRGQ8N5I3 272 aa10.85□□□□□ -0.67
CSHL1-208ENST00000558609 ZNF680Q8NEM1 530 aa10.85□□□□□ -0.67
CSHL1-208ENST00000558609 ARPC5LQ9BPX5 153 aa10.85□□□□□ -0.67
CSHL1-208ENST00000558609 Q9H3A6 140 aa10.85□□□□□ -0.67
CSHL1-208ENST00000558609 GAGE12BA1L429 117 aa10.84□□□□□ -0.67
CSHL1-208ENST00000558609 GAGE7O76087 117 aa10.84□□□□□ -0.67
CSHL1-208ENST00000558609 NUDT3O95989 172 aa10.84□□□□□ -0.67
CSHL1-208ENST00000558609 GAGE12FP0CL80 117 aa10.84□□□□□ -0.67
CSHL1-208ENST00000558609 GAGE12GP0CL81 117 aa10.84□□□□□ -0.67
CSHL1-208ENST00000558609 GAGE12IP0CL82 117 aa10.84□□□□□ -0.67
CSHL1-208ENST00000558609 CSN1S1P47710 185 aa10.84□□□□□ -0.67
CSHL1-208ENST00000558609 ZNF138P52744 262 aa10.84□□□□□ -0.67
CSHL1-208ENST00000558609 ACOT6Q3I5F7 207 aaPredicted RBP10.84□□□□□ -0.67
CSHL1-208ENST00000558609 EIF4E3Q8N5X7 224 aaKnown RBP10.84□□□□□ -0.67
CSHL1-208ENST00000558609 C11orf72Q8NBR9 251 aa10.84□□□□□ -0.67
CSHL1-208ENST00000558609 AQP10Q96PS8 301 aa10.84□□□□□ -0.67
CSHL1-208ENST00000558609 ATG101Q9BSB4 218 aa10.84□□□□□ -0.67
CSHL1-208ENST00000558609 IGLV2-18A0A075B6J9 118 aa10.83□□□□□ -0.68
CSHL1-208ENST00000558609 RTL8CO15255 209 aa10.83□□□□□ -0.68
CSHL1-208ENST00000558609 BCL2L11O43521 198 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms