RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SLC25A5P05141 298 aaKnown RBP12.72□□□□□ -0.37
TPM1-214ENST00000558544 GNG5P63218 68 aa12.72□□□□□ -0.37
TPM1-214ENST00000558544 COMMD7Q86VX2 200 aa12.72□□□□□ -0.37
TPM1-214ENST00000558544 RXFP4Q8TDU9 374 aa12.72□□□□□ -0.37
TPM1-214ENST00000558544 TP53TG1Q9Y2A0 90 aa12.72□□□□□ -0.37
TPM1-214ENST00000558544 A0A1W2PRE2 83 aa12.71□□□□□ -0.37
TPM1-214ENST00000558544 DIRC3C9JPN6 131 aa12.71□□□□□ -0.37
TPM1-214ENST00000558544 CSNK1G2-AS1Q8NCQ2 148 aa12.71□□□□□ -0.37
TPM1-214ENST00000558544 VGLL1Q99990 258 aa12.71□□□□□ -0.37
TPM1-214ENST00000558544 FAM74A7A6NL05 159 aa12.7□□□□□ -0.38
TPM1-214ENST00000558544 CT45A10P0DMU9 189 aa12.7□□□□□ -0.38
TPM1-214ENST00000558544 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
TPM1-214ENST00000558544 C9orf47Q6ZRZ4 202 aa12.7□□□□□ -0.38
TPM1-214ENST00000558544 LYPD6BQ8NI32 183 aa12.7□□□□□ -0.38
TPM1-214ENST00000558544 AGPAT4-IT1Q9H0P7 198 aa12.7□□□□□ -0.38
TPM1-214ENST00000558544 TRAV12-2A0A075B6T6 113 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 TMEM78Q5T7P6 136 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 GOLT1AQ6ZVE7 132 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 C5orf17Q8NAS9 161 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 STAB2Q8WWQ8 2551 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 RBAKDNA6NC62 111 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 J3KRW8 73 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 CRXO43186 299 aaPredicted RBP12.69□□□□□ -0.38
TPM1-214ENST00000558544 AMBPP02760 352 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 CDKN1BP46527 198 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 OR11H2Q8NH07 326 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 Q8TAT8 98 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 LINC00477Q96M19 166 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 ODF3Q96PU9 254 aa12.69□□□□□ -0.38
TPM1-214ENST00000558544 TRAV1-1A0A0B4J248 108 aa12.68□□□□□ -0.38
TPM1-214ENST00000558544 INSP01308 110 aa12.68□□□□□ -0.38
TPM1-214ENST00000558544 CCL20P78556 96 aa12.68□□□□□ -0.38
TPM1-214ENST00000558544 KIR3DS1Q14943 382 aa12.68□□□□□ -0.38
TPM1-214ENST00000558544 CST9LP1Q5W188 147 aa12.68□□□□□ -0.38
TPM1-214ENST00000558544 ARL6IP6Q8N6S5 226 aa12.68□□□□□ -0.38
TPM1-214ENST00000558544 IGF2BP2-AS1Q96M15 143 aa12.68□□□□□ -0.38
TPM1-214ENST00000558544 RARRES2Q99969 163 aa12.68□□□□□ -0.38
TPM1-214ENST00000558544 IGHV3OR16-12A0A075B7B8 117 aa12.67□□□□□ -0.38
TPM1-214ENST00000558544 PAGE4O60829 102 aa12.67□□□□□ -0.38
TPM1-214ENST00000558544 HBE1P02100 147 aa12.67□□□□□ -0.38
TPM1-214ENST00000558544 TCRAP04437 139 aa12.67□□□□□ -0.38
TPM1-214ENST00000558544 TSPOP30536 169 aa12.67□□□□□ -0.38
TPM1-214ENST00000558544 LEPP41159 167 aa12.67□□□□□ -0.38
TPM1-214ENST00000558544 ZNF492Q9P255 531 aa12.67□□□□□ -0.38
TPM1-214ENST00000558544 EPDR1Q9UM22 224 aa12.67□□□□□ -0.38
TPM1-214ENST00000558544 ARL2-SNX15V9GYD0 113 aa12.67□□□□□ -0.38
TPM1-214ENST00000558544 DNAH7Q8WXX0 4024 aa12.67□□□□□ -0.38
TPM1-214ENST00000558544 TRAV8-1A0A0A6YYK1 113 aa12.66□□□□□ -0.38
TPM1-214ENST00000558544 ATP5G3P48201 142 aa12.66□□□□□ -0.38
TPM1-214ENST00000558544 PPT1P50897 306 aa12.66□□□□□ -0.38
TPM1-214ENST00000558544 ZNF138P52744 262 aa12.66□□□□□ -0.38
TPM1-214ENST00000558544 C1orf158Q8N1D5 194 aa12.66□□□□□ -0.38
TPM1-214ENST00000558544 FAM19A4Q96LR4 140 aa12.66□□□□□ -0.38
TPM1-214ENST00000558544 SGK494Q96LW2 274 aa12.66□□□□□ -0.38
TPM1-214ENST00000558544 NKX6-2Q9C056 277 aaPredicted RBP12.66□□□□□ -0.38
TPM1-214ENST00000558544 GOLT1BQ9Y3E0 138 aa12.66□□□□□ -0.38
TPM1-214ENST00000558544 X6R8D5 127 aa12.66□□□□□ -0.38
TPM1-214ENST00000558544 RBMY1A1P0DJD3 496 aaKnown RBP12.65□□□□□ -0.38
TPM1-214ENST00000558544 RBMY1CP0DJD4 496 aa12.65□□□□□ -0.38
TPM1-214ENST00000558544 RBMY1FQ15415 496 aaKnown RBP12.65□□□□□ -0.38
TPM1-214ENST00000558544 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
TPM1-214ENST00000558544 ZNF705AQ6ZN79 300 aaPredicted RBP12.65□□□□□ -0.38
TPM1-214ENST00000558544 CYB561D1Q8N8Q1 229 aa12.65□□□□□ -0.38
TPM1-214ENST00000558544 ATG101Q9BSB4 218 aa12.65□□□□□ -0.38
TPM1-214ENST00000558544 GNG13Q9P2W3 67 aa12.65□□□□□ -0.38
TPM1-214ENST00000558544 SERTM2A0A1B0GWG4 89 aa12.64□□□□□ -0.39
TPM1-214ENST00000558544 K7EQM0 130 aa12.64□□□□□ -0.39
TPM1-214ENST00000558544 CCDC28AQ8IWP9 274 aa12.64□□□□□ -0.39
TPM1-214ENST00000558544 EIF4E3Q8N5X7 224 aaKnown RBP12.64□□□□□ -0.39
TPM1-214ENST00000558544 TMEM208Q9BTX3 173 aa12.64□□□□□ -0.39
TPM1-214ENST00000558544 MANBALQ9NQG1 85 aa12.64□□□□□ -0.39
TPM1-214ENST00000558544 RAB19A4D1S5 217 aa12.63□□□□□ -0.39
TPM1-214ENST00000558544 PEX7O00628 323 aa12.63□□□□□ -0.39
TPM1-214ENST00000558544 CRISP2P16562 243 aa12.63□□□□□ -0.39
TPM1-214ENST00000558544 SRSF3P84103 164 aaKnown RBP12.63□□□□□ -0.39
TPM1-214ENST00000558544 BTN1A1Q13410 526 aa12.63□□□□□ -0.39
TPM1-214ENST00000558544 PRR9Q5T870 116 aa12.63□□□□□ -0.39
TPM1-214ENST00000558544 TRAV12-3A0A0B4J271 114 aa12.62□□□□□ -0.39
TPM1-214ENST00000558544 A0A0J9YWU9 116 aa12.62□□□□□ -0.39
TPM1-214ENST00000558544 KLLNB2CW77 178 aa12.62□□□□□ -0.39
TPM1-214ENST00000558544 ZFAND2AQ8N6M9 145 aa12.62□□□□□ -0.39
TPM1-214ENST00000558544 TMEM75Q8N9X5 138 aa12.62□□□□□ -0.39
TPM1-214ENST00000558544 Q8NAQ8 132 aa12.62□□□□□ -0.39
TPM1-214ENST00000558544 HIST1H2BAQ96A08 127 aa12.62□□□□□ -0.39
TPM1-214ENST00000558544 TRAV34A0A0B4J273 112 aa12.61□□□□□ -0.39
TPM1-214ENST00000558544 IGHV4-28A0A0C4DH34 117 aa12.61□□□□□ -0.39
TPM1-214ENST00000558544 C7orf71A4D174 169 aa12.61□□□□□ -0.39
TPM1-214ENST00000558544 C11orf94C9JXX5 98 aa12.61□□□□□ -0.39
TPM1-214ENST00000558544 DEFB4AO15263 64 aa12.61□□□□□ -0.39
TPM1-214ENST00000558544 GPX1P07203 203 aa12.61□□□□□ -0.39
TPM1-214ENST00000558544 MIFP14174 115 aa12.61□□□□□ -0.39
TPM1-214ENST00000558544 LINC00479Q96M42 142 aa12.61□□□□□ -0.39
TPM1-214ENST00000558544 EDA2RQ9HAV5 297 aa12.61□□□□□ -0.39
TPM1-214ENST00000558544 PSG8Q9UQ74 426 aa12.61□□□□□ -0.39
TPM1-214ENST00000558544 TRBV7-9A0A0J9YWB2 115 aa12.6□□□□□ -0.39
TPM1-214ENST00000558544 IFNA1P01562 189 aa12.6□□□□□ -0.39
TPM1-214ENST00000558544 IGLV2-11P01706 119 aa12.6□□□□□ -0.39
TPM1-214ENST00000558544 RNASE4P34096 147 aaKnown RBP12.6□□□□□ -0.39
TPM1-214ENST00000558544 FLI1Q01543 452 aaPredicted RBP12.6□□□□□ -0.39
TPM1-214ENST00000558544 PRNTQ86SH4 94 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms