RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 TRAV12-2A0A075B6T6 113 aa11.37□□□□□ -0.59
RABGGTA-205ENST00000558534 LYRM9A8MSI8 78 aa11.37□□□□□ -0.59
RABGGTA-205ENST00000558534 ARL14EPLP0DKL9 152 aa11.37□□□□□ -0.59
RABGGTA-205ENST00000558534 CT45A10P0DMU9 189 aa11.37□□□□□ -0.59
RABGGTA-205ENST00000558534 TMED6Q8WW62 240 aa11.37□□□□□ -0.59
RABGGTA-205ENST00000558534 ZNF503Q96F45 646 aa11.37□□□□□ -0.59
RABGGTA-205ENST00000558534 PYGO2Q9BRQ0 406 aa11.37□□□□□ -0.59
RABGGTA-205ENST00000558534 SH3BGRL3Q9H299 93 aa11.37□□□□□ -0.59
RABGGTA-205ENST00000558534 TENM2Q9NT68 2774 aa11.37□□□□□ -0.59
RABGGTA-205ENST00000558534 STARD9Q9P2P6 4700 aa11.37□□□□□ -0.59
RABGGTA-205ENST00000558534 FBLL1A6NHQ2 334 aaKnown RBP11.36□□□□□ -0.59
RABGGTA-205ENST00000558534 UMAD1C9J7I0 102 aa11.36□□□□□ -0.59
RABGGTA-205ENST00000558534 BCL2L11O43521 198 aa11.36□□□□□ -0.59
RABGGTA-205ENST00000558534 GPX1P07203 203 aa11.36□□□□□ -0.59
RABGGTA-205ENST00000558534 ZNF138P52744 262 aa11.36□□□□□ -0.59
RABGGTA-205ENST00000558534 Q6ZNX1 250 aa11.36□□□□□ -0.59
RABGGTA-205ENST00000558534 TCTE3Q8IZS6 198 aa11.36□□□□□ -0.59
RABGGTA-205ENST00000558534 STOML3Q8TAV4 291 aa11.36□□□□□ -0.59
RABGGTA-205ENST00000558534 TMEM263Q8WUH6 116 aaKnown RBP11.36□□□□□ -0.59
RABGGTA-205ENST00000558534 ST6GAL2Q96JF0 529 aa11.36□□□□□ -0.59
RABGGTA-205ENST00000558534 NKX6-2Q9C056 277 aaPredicted RBP11.36□□□□□ -0.59
RABGGTA-205ENST00000558534 C7orf71A4D174 169 aa11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 PGPA6NDG6 321 aa11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 SMLR1H3BR10 107 aa11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 SEC11BP0C7V7 166 aa11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 CRISP2P16562 243 aa11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 GCHFRP30047 84 aa11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 EMP1P54849 157 aa11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 GFI1BQ5VTD9 330 aa11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 EIF5AL1Q6IS14 154 aaKnown RBP11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 ZNF471Q9BX82 626 aaPredicted RBP11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 ZNF492Q9P255 531 aa11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 YTHDF2Q9Y5A9 579 aaKnown RBP11.35□□□□□ -0.59
RABGGTA-205ENST00000558534 DIRC3C9JPN6 131 aa11.34□□□□□ -0.59
RABGGTA-205ENST00000558534 TPT1P13693 172 aaKnown RBP11.34□□□□□ -0.59
RABGGTA-205ENST00000558534 DPPA3Q6W0C5 159 aa11.34□□□□□ -0.59
RABGGTA-205ENST00000558534 IQCF2Q8IXL9 164 aa11.34□□□□□ -0.59
RABGGTA-205ENST00000558534 C5orf17Q8NAS9 161 aa11.34□□□□□ -0.59
RABGGTA-205ENST00000558534 ZNF680Q8NEM1 530 aa11.34□□□□□ -0.59
RABGGTA-205ENST00000558534 SUN5Q8TC36 379 aa11.34□□□□□ -0.59
RABGGTA-205ENST00000558534 HYLS1Q96M11 299 aa11.34□□□□□ -0.59
RABGGTA-205ENST00000558534 NDFIP1Q9BT67 221 aa11.34□□□□□ -0.59
RABGGTA-205ENST00000558534 CYTL1Q9NRR1 136 aa11.34□□□□□ -0.59
RABGGTA-205ENST00000558534 DKK2Q9UBU2 259 aa11.34□□□□□ -0.59
RABGGTA-205ENST00000558534 IGKV2-40A0A087WW87 121 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 LCE6AA0A183 80 aa11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 A0A1W2PRE2 83 aa11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 KLLNB2CW77 178 aa11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 HMGB3O15347 200 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 IGKV2D-40P01614 121 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 DAD1P61803 113 aa11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 ERCC8Q13216 396 aa11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 AKAP14Q86UN6 197 aa11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 FAM210BQ96KR6 192 aa11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 FAM19A4Q96LR4 140 aa11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 TIMM8BQ9Y5J9 83 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-205ENST00000558534 TRAV12-3A0A0B4J271 114 aa11.32□□□□□ -0.6
RABGGTA-205ENST00000558534 ZNF705GA8MUZ8 300 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-205ENST00000558534 SNURFLB1AK76 121 aa11.32□□□□□ -0.6
RABGGTA-205ENST00000558534 HTN1P15515 57 aa11.32□□□□□ -0.6
RABGGTA-205ENST00000558534 Q6ZTC4 211 aa11.32□□□□□ -0.6
RABGGTA-205ENST00000558534 OR11H4Q8NGC9 324 aa11.32□□□□□ -0.6
RABGGTA-205ENST00000558534 LINC00467Q9BRT7 94 aa11.32□□□□□ -0.6
RABGGTA-205ENST00000558534 KMT2CQ8NEZ4 4911 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-205ENST00000558534 DEFB131BA0A096LNP1 70 aa11.31□□□□□ -0.6
RABGGTA-205ENST00000558534 J3KRW8 73 aa11.31□□□□□ -0.6
RABGGTA-205ENST00000558534 C1QBP02746 253 aa11.31□□□□□ -0.6
RABGGTA-205ENST00000558534 C12orf74Q32Q52 190 aa11.31□□□□□ -0.6
RABGGTA-205ENST00000558534 TMUB2Q71RG4 321 aa11.31□□□□□ -0.6
RABGGTA-205ENST00000558534 VGLL1Q99990 258 aa11.31□□□□□ -0.6
RABGGTA-205ENST00000558534 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
RABGGTA-205ENST00000558534 CELA1Q9UNI1 258 aa11.31□□□□□ -0.6
RABGGTA-205ENST00000558534 MAP1LC3B2A6NCE7 125 aa11.3□□□□□ -0.6
RABGGTA-205ENST00000558534 TEX46H3BTG2 121 aa11.3□□□□□ -0.6
RABGGTA-205ENST00000558534 RGS13O14921 159 aa11.3□□□□□ -0.6
RABGGTA-205ENST00000558534 RNASE4P34096 147 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-205ENST00000558534 PPT1P50897 306 aa11.3□□□□□ -0.6
RABGGTA-205ENST00000558534 LGALSLQ3ZCW2 172 aaPredicted RBP11.3□□□□□ -0.6
RABGGTA-205ENST00000558534 EIF4E3Q8N5X7 224 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-205ENST00000558534 TCEAL7Q9BRU2 100 aa11.3□□□□□ -0.6
RABGGTA-205ENST00000558534 MAP1LC3BQ9GZQ8 125 aa11.3□□□□□ -0.6
RABGGTA-205ENST00000558534 ARL2-SNX15V9GYD0 113 aa11.3□□□□□ -0.6
RABGGTA-205ENST00000558534 LYSTQ99698 3801 aa11.3□□□□□ -0.6
RABGGTA-205ENST00000558534 DYNC2H1Q8NCM8 4307 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-205ENST00000558534 F6UZH7 168 aa11.29□□□□□ -0.6
RABGGTA-205ENST00000558534 RAB5CP51148 216 aa11.29□□□□□ -0.6
RABGGTA-205ENST00000558534 ANXA2RQ3ZCQ2 193 aa11.29□□□□□ -0.6
RABGGTA-205ENST00000558534 ZFP69Q49AA0 526 aa11.29□□□□□ -0.6
RABGGTA-205ENST00000558534 GOLT1AQ6ZVE7 132 aa11.29□□□□□ -0.6
RABGGTA-205ENST00000558534 RNASE8Q8TDE3 154 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-205ENST00000558534 CBY3A6NI87 242 aa11.28□□□□□ -0.6
RABGGTA-205ENST00000558534 IGLL5B9A064 214 aa11.28□□□□□ -0.6
RABGGTA-205ENST00000558534 EIF3GO75821 320 aaKnown RBP eCLIP11.28□□□□□ -0.6
RABGGTA-205ENST00000558534 PRB4P10163 310 aaPredicted RBP11.28□□□□□ -0.6
RABGGTA-205ENST00000558534 SUMO1P63165 101 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-205ENST00000558534 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
RABGGTA-205ENST00000558534 CYB561D1Q8N8Q1 229 aa11.28□□□□□ -0.6
RABGGTA-205ENST00000558534 ATG101Q9BSB4 218 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms