RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 TRAV41A0A0B4J266 112 aa12.17□□□□□ -0.46
AP4E1-202ENST00000558439 FAM104BQ5XKR9 115 aa12.17□□□□□ -0.46
AP4E1-202ENST00000558439 HIST1H4GQ99525 98 aa12.17□□□□□ -0.46
AP4E1-202ENST00000558439 INS-IGF2F8WCM5 200 aa12.16□□□□□ -0.46
AP4E1-202ENST00000558439 MSRB2Q9Y3D2 182 aa12.16□□□□□ -0.46
AP4E1-202ENST00000558439 SETD2Q9BYW2 2564 aaPredicted RBP12.16□□□□□ -0.46
AP4E1-202ENST00000558439 K7ERU9 68 aa12.16□□□□□ -0.46
AP4E1-202ENST00000558439 NPFFO15130 113 aa12.16□□□□□ -0.46
AP4E1-202ENST00000558439 ESDP10768 282 aa12.16□□□□□ -0.46
AP4E1-202ENST00000558439 GNLYP22749 145 aa12.16□□□□□ -0.46
AP4E1-202ENST00000558439 IL17RELQ6ZVW7 336 aa12.16□□□□□ -0.46
AP4E1-202ENST00000558439 TP73-AS1Q9UF72 201 aa12.16□□□□□ -0.46
AP4E1-202ENST00000558439 LINC00310P59036 64 aa12.16□□□□□ -0.46
AP4E1-202ENST00000558439 MRPL51Q4U2R6 128 aaKnown RBP12.16□□□□□ -0.46
AP4E1-202ENST00000558439 LDLRAD2Q5SZI1 272 aa12.16□□□□□ -0.46
AP4E1-202ENST00000558439 KLF12Q9Y4X4 402 aa12.16□□□□□ -0.46
AP4E1-202ENST00000558439 NBL1P41271 181 aa12.15□□□□□ -0.46
AP4E1-202ENST00000558439 SIGLEC8Q9NYZ4 499 aa12.15□□□□□ -0.46
AP4E1-202ENST00000558439 USP9XQ93008 2570 aaPredicted RBP12.15□□□□□ -0.46
AP4E1-202ENST00000558439 FABP2P12104 132 aa12.15□□□□□ -0.46
AP4E1-202ENST00000558439 GTSCR1Q86UQ5 136 aa12.15□□□□□ -0.46
AP4E1-202ENST00000558439 OOSP1A8MZH6 123 aa12.15□□□□□ -0.46
AP4E1-202ENST00000558439 SFTPCP11686 197 aa12.15□□□□□ -0.46
AP4E1-202ENST00000558439 KLF5Q13887 457 aaPredicted RBP12.15□□□□□ -0.46
AP4E1-202ENST00000558439 BCL6BQ8N143 479 aaPredicted RBP12.15□□□□□ -0.46
AP4E1-202ENST00000558439 MS4A6AQ9H2W1 248 aa12.15□□□□□ -0.46
AP4E1-202ENST00000558439 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
AP4E1-202ENST00000558439 EGR2P11161 476 aaPredicted RBP12.15□□□□□ -0.47
AP4E1-202ENST00000558439 ID1P41134 155 aa12.15□□□□□ -0.47
AP4E1-202ENST00000558439 SPRY2O43597 315 aa12.14□□□□□ -0.47
AP4E1-202ENST00000558439 FAM106AQ4KMX7 169 aa12.14□□□□□ -0.47
AP4E1-202ENST00000558439 FAM159AQ6UWV7 190 aa12.14□□□□□ -0.47
AP4E1-202ENST00000558439 H3BUX3 64 aa12.14□□□□□ -0.47
AP4E1-202ENST00000558439 NPYP01303 97 aa12.14□□□□□ -0.47
AP4E1-202ENST00000558439 ASIPP42127 132 aa12.14□□□□□ -0.47
AP4E1-202ENST00000558439 SCGB3A1Q96QR1 104 aa12.14□□□□□ -0.47
AP4E1-202ENST00000558439 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
AP4E1-202ENST00000558439 PPBPP02775 128 aa12.14□□□□□ -0.47
AP4E1-202ENST00000558439 NXT2Q9NPJ8 142 aaKnown RBP12.14□□□□□ -0.47
AP4E1-202ENST00000558439 PSMB11A5LHX3 300 aa12.13□□□□□ -0.47
AP4E1-202ENST00000558439 SCGB1C2P0DMR2 95 aa12.13□□□□□ -0.47
AP4E1-202ENST00000558439 UBE2V1Q13404 147 aa12.13□□□□□ -0.47
AP4E1-202ENST00000558439 PLP1P60201 277 aa12.13□□□□□ -0.47
AP4E1-202ENST00000558439 LCNL1Q6ZST4 164 aa12.13□□□□□ -0.47
AP4E1-202ENST00000558439 TMEM158Q8WZ71 300 aa12.13□□□□□ -0.47
AP4E1-202ENST00000558439 BOD1L1Q8NFC6 3051 aa12.13□□□□□ -0.47
AP4E1-202ENST00000558439 OR11H6Q8NGC7 330 aa12.12□□□□□ -0.47
AP4E1-202ENST00000558439 DPF1Q92782 380 aa12.12□□□□□ -0.47
AP4E1-202ENST00000558439 MBD6Q96DN6 1003 aa12.12□□□□□ -0.47
AP4E1-202ENST00000558439 MRPL52Q86TS9 123 aaKnown RBP12.12□□□□□ -0.47
AP4E1-202ENST00000558439 DYNAPQ8N1N2 210 aa12.12□□□□□ -0.47
AP4E1-202ENST00000558439 SONP18583 2426 aaKnown RBP12.12□□□□□ -0.47
AP4E1-202ENST00000558439 TRAV26-2A0A0B4J265 109 aa12.12□□□□□ -0.47
AP4E1-202ENST00000558439 ATP5LO75964 103 aa12.12□□□□□ -0.47
AP4E1-202ENST00000558439 ORAOV1Q8WV07 137 aa12.12□□□□□ -0.47
AP4E1-202ENST00000558439 OR11H12B2RN74 326 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 TNFRSF6BO95407 300 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 UBE2E1P51965 193 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 OR11H1Q8NG94 326 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 OR11H2Q8NH07 326 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 NHP2Q9NX24 153 aaKnown RBP12.11□□□□□ -0.47
AP4E1-202ENST00000558439 JKAMPQ9P055 326 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 MOB4Q9Y3A3 225 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 MYO18BQ8IUG5 2567 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 C19orf71A6NCJ1 209 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.11□□□□□ -0.47
AP4E1-202ENST00000558439 CTSGP08311 255 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 GATA1P15976 413 aaPredicted RBP12.11□□□□□ -0.47
AP4E1-202ENST00000558439 ZFP36P26651 326 aaKnown RBP12.11□□□□□ -0.47
AP4E1-202ENST00000558439 SFTA2Q6UW10 78 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 MLST8Q9BVC4 326 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 IGHV7-81A0A0B4J1V7 117 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 SMIM13P0DJ93 91 aa12.11□□□□□ -0.47
AP4E1-202ENST00000558439 C14orf178Q8N769 122 aaPredicted RBP12.11□□□□□ -0.47
AP4E1-202ENST00000558439 IGLV11-55A0A075B6I3 123 aa12.1□□□□□ -0.47
AP4E1-202ENST00000558439 ADORA2A-AS1P86434 159 aa12.1□□□□□ -0.47
AP4E1-202ENST00000558439 Q1RN00 199 aa12.1□□□□□ -0.47
AP4E1-202ENST00000558439 FAM110DQ8TAY7 271 aaPredicted RBP12.1□□□□□ -0.47
AP4E1-202ENST00000558439 FANCD2OSQ96PS1 177 aa12.1□□□□□ -0.47
AP4E1-202ENST00000558439 ZNF747Q9BV97 191 aa12.1□□□□□ -0.47
AP4E1-202ENST00000558439 VWC2LB2RUY7 222 aa12.1□□□□□ -0.47
AP4E1-202ENST00000558439 NPFFR1Q9GZQ6 430 aa12.1□□□□□ -0.47
AP4E1-202ENST00000558439 ZNF56Q15929 161 aa12.1□□□□□ -0.47
AP4E1-202ENST00000558439 ZC2HC1BQ5TFG8 222 aa12.1□□□□□ -0.47
AP4E1-202ENST00000558439 SPCS1Q9Y6A9 102 aa12.1□□□□□ -0.47
AP4E1-202ENST00000558439 LOC107984156A0A0G2JMH3 177 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 C2orf70A6NJV1 201 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 J3QR89 54 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 FCN3O75636 299 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 ARL17AQ8IVW1 177 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 TTC9CQ8N5M4 171 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 DPM2O94777 84 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 IGKCP01834 107 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 ZNF256Q9Y2P7 627 aaPredicted RBP12.09□□□□□ -0.47
AP4E1-202ENST00000558439 NAV2Q8IVL1 2488 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 IGHV2-70DA0A0C4DH43 119 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 A0A1B0GXF2 115 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 TGFAP01135 160 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 HOXB4P17483 251 aaPredicted RBP12.09□□□□□ -0.47
AP4E1-202ENST00000558439 PRSS22Q9GZN4 317 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms