RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 RRN3P1Q2M238 152 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 TMEM78Q5T7P6 136 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 C9orf47Q6ZRZ4 202 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 CMTM2Q8TAZ6 248 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 RXFP4Q8TDU9 374 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 LINC01587Q99440 93 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 VGLL1Q99990 258 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 AGPAT4-IT1Q9H0P7 198 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 TMEM167BQ9NRX6 74 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 RPH3ALQ9UNE2 315 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 DYNC2H1Q8NCM8 4307 aaKnown RBP8.9□□□□□ -0.99
SMAD3-205ENST00000558428 LYSTQ99698 3801 aa8.89□□□□□ -0.99
SMAD3-205ENST00000558428 LOC102723971A0A1B0GUV8 181 aa8.89□□□□□ -0.99
SMAD3-205ENST00000558428 A0A1B0GVG6 124 aa8.89□□□□□ -0.99
SMAD3-205ENST00000558428 TMEM189A5PLL7 270 aa8.89□□□□□ -0.99
SMAD3-205ENST00000558428 ZNF705GA8MUZ8 300 aaPredicted RBP8.89□□□□□ -0.99
SMAD3-205ENST00000558428 DIRC3C9JPN6 131 aa8.89□□□□□ -0.99
SMAD3-205ENST00000558428 SEC11BP0C7V7 166 aa8.89□□□□□ -0.99
SMAD3-205ENST00000558428 TPT1P13693 172 aaKnown RBP8.89□□□□□ -0.99
SMAD3-205ENST00000558428 LGALSLQ3ZCW2 172 aaPredicted RBP8.89□□□□□ -0.99
SMAD3-205ENST00000558428 GFI1BQ5VTD9 330 aa8.89□□□□□ -0.99
SMAD3-205ENST00000558428 TMEM256Q8N2U0 113 aa8.89□□□□□ -0.99
SMAD3-205ENST00000558428 CELA1Q9UNI1 258 aa8.89□□□□□ -0.99
SMAD3-205ENST00000558428 TENM2Q9NT68 2774 aa8.88□□□□□ -0.99
SMAD3-205ENST00000558428 RBAKDNA6NC62 111 aa8.88□□□□□ -0.99
SMAD3-205ENST00000558428 PRM2P04554 102 aa8.88□□□□□ -0.99
SMAD3-205ENST00000558428 SLC25A5P05141 298 aaKnown RBP8.88□□□□□ -0.99
SMAD3-205ENST00000558428 FGF8P55075 233 aaPredicted RBP8.88□□□□□ -0.99
SMAD3-205ENST00000558428 SUN5Q8TC36 379 aa8.88□□□□□ -0.99
SMAD3-205ENST00000558428 C20orf144Q9BQM9 153 aa8.88□□□□□ -0.99
SMAD3-205ENST00000558428 ZNF492Q9P255 531 aa8.88□□□□□ -0.99
SMAD3-205ENST00000558428 TRAV12-3A0A0B4J271 114 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 C7orf71A4D174 169 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 MAP1LC3B2A6NCE7 125 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 UMAD1C9J7I0 102 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 HTN1P15515 57 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 FHITP49789 147 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 ZNF138P52744 262 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 TAS2R60P59551 318 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 CD300CQ08708 224 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 GOLT1AQ6ZVE7 132 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 Q8TAT8 98 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 STOML3Q8TAV4 291 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 PHLDA1Q8WV24 401 aaPredicted RBP8.87□□□□□ -0.99
SMAD3-205ENST00000558428 FAM19A4Q96LR4 140 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 MAP1LC3BQ9GZQ8 125 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 TMPRSS5Q9H3S3 457 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 PLA2G2EQ9NZK7 142 aa8.87□□□□□ -0.99
SMAD3-205ENST00000558428 NUPR2A6NF83 97 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 KLLNB2CW77 178 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 H7BYZ3 331 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 GPX1P07203 203 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 CRISP2P16562 243 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 SUMO1P63165 101 aaKnown RBP8.86□□□□□ -0.99
SMAD3-205ENST00000558428 GNG5P63218 68 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 BTN1A1Q13410 526 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 CEMP1Q6PRD7 247 aaPredicted RBP8.86□□□□□ -0.99
SMAD3-205ENST00000558428 ARL6IP6Q8N6S5 226 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 FAM213BQ8TBF2 198 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 TMED6Q8WW62 240 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 NIPSNAP3BQ9BS92 247 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 YTHDF2Q9Y5A9 579 aaKnown RBP8.86□□□□□ -0.99
SMAD3-205ENST00000558428 SACSQ9NZJ4 4579 aa8.86□□□□□ -0.99
SMAD3-205ENST00000558428 TEX48A0A1B0GUV7 120 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 A0A1W2PRE2 83 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 GGTLC3B5MD39 225 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 NMBP08949 121 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 SPART-AS1P0CW21 52 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 AZU1P20160 251 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 RNASE4P34096 147 aaKnown RBP8.85□□□□□ -0.99
SMAD3-205ENST00000558428 UBE2G2P60604 165 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 ZFP69Q49AA0 526 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 FAM222AQ5U5X8 452 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 Q6ZTC4 211 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 ZNF767PQ75MW2 155 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 ZFAND2AQ8N6M9 145 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 C5orf17Q8NAS9 161 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 DKK2Q9UBU2 259 aa8.85□□□□□ -0.99
SMAD3-205ENST00000558428 KLK5Q9Y337 293 aaPredicted RBP8.85□□□□□ -0.99
SMAD3-205ENST00000558428 TRBV7-9A0A0J9YWB2 115 aa8.84□□□□□ -0.99
SMAD3-205ENST00000558428 SERTM2A0A1B0GWG4 89 aa8.84□□□□□ -0.99
SMAD3-205ENST00000558428 C12orf74Q32Q52 190 aa8.84□□□□□ -0.99
SMAD3-205ENST00000558428 PRR9Q5T870 116 aa8.84□□□□□ -0.99
SMAD3-205ENST00000558428 EIF5AL1Q6IS14 154 aaKnown RBP8.84□□□□□ -0.99
SMAD3-205ENST00000558428 DPPA3Q6W0C5 159 aa8.84□□□□□ -0.99
SMAD3-205ENST00000558428 SLC51BQ86UW2 128 aa8.84□□□□□ -0.99
SMAD3-205ENST00000558428 CCDC28AQ8IWP9 274 aa8.84□□□□□ -0.99
SMAD3-205ENST00000558428 SFT2D1Q8WV19 159 aa8.84□□□□□ -0.99
SMAD3-205ENST00000558428 C16orf74Q96GX8 76 aa8.84□□□□□ -0.99
SMAD3-205ENST00000558428 PYGO2Q9BRQ0 406 aa8.84□□□□□ -0.99
SMAD3-205ENST00000558428 RYR3Q15413 4870 aa8.83□□□□□ -1
SMAD3-205ENST00000558428 TRAV8-1A0A0A6YYK1 113 aa8.83□□□□□ -1
SMAD3-205ENST00000558428 A0A1B0GV50 99 aa8.83□□□□□ -1
SMAD3-205ENST00000558428 C11orf94C9JXX5 98 aa8.83□□□□□ -1
SMAD3-205ENST00000558428 K7EQM0 130 aa8.83□□□□□ -1
SMAD3-205ENST00000558428 ZNF324O75467 553 aaPredicted RBP8.83□□□□□ -1
SMAD3-205ENST00000558428 TCRAP04437 139 aa8.83□□□□□ -1
SMAD3-205ENST00000558428 C9orf62Q8N4C0 152 aa8.83□□□□□ -1
SMAD3-205ENST00000558428 TMEM263Q8WUH6 116 aaKnown RBP8.83□□□□□ -1
SMAD3-205ENST00000558428 MBD3L1Q8WWY6 194 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms